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Search Articles for "Chromatin"

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The marrow cell continuum: stochastic determinism.

Author(s): P Quesenberry | M Abedi | M Dooner | G Colvin | F Martin Sanchez-Guijo | J Aliotta | J Pimentel | G Dooner | D Greer | D Demers | P Keaney | A Peterson | L Luo | B Foster
Evaluation of sperm genomic integrity of normozoospermic men: a prospective study.

Author(s): M Piasecka | D Gaczarzewicz | M Laszczyńska
Effect of Trichostatin A on CD4 surface density in peripheral blood T cells.

Author(s): Anna Kozłowska | Paweł P Jagodziński
Flow cytometry application in the assessment of sperm DNA integrity of men with asthenozoospermia.

Author(s): M Piasecka | D Gaczarzewicz | M Laszczyńska | A Starczewski | A Brodowska
Evaluation of protamines 1 and 2 transcript contents in spermatozoa from asthenozoospermic men.

Author(s): Bartosz Kempisty | Magdalena Depa-Martynow | Margarita Lianeri | Piotr Jedrzejczak | Agnieszka Darul-Wasowicz | Paweł P Jagodzinski
New insights about the evaluation of human sperm quality: the aromatase example.

Author(s): I Galeraud-Denis | C Travert | C de Vienne | L Said | A Saad | S Carreau
Effect of arsenic trioxide (Trisenox) on actin organization in K-562 erythroleukemia cells.

Author(s): Magdalena Izdebska | Alina Grzanka | Maciej Ostrowski | Agnieszka Zuryń | Dariusz Grzanka
Doxorubicin-induced F-actin reorganization in cofilin-1 (nonmuscle) down-regulated CHO AA8 cells.

Author(s): D Grzanka | A Marszałek | M Gagat | M Izdebska | L Gackowska | A Grzanka
Rumex acetosa Y chromosomes: constitutive or facultative heterochromatin?

Author(s): Magdalena Mosiołek | Paweł Pasierbek | Janusz Malarz | Maria Moś | Andrzej J. Joachimiak
EZH2 Methyltransferase and H3K27 Methylation in Breast Cancer

Author(s): Kyung Hyun Yoo, Lothar Hennighausen
Bioinformatics Tools and Novel Challenges in Long Non-Coding RNAs (lncRNAs) Functional Analysis

Author(s): Letizia Da Sacco | Antonella Baldassarre | Andrea Masotti
The Destructive Action of IL-1α and IL-1β in IDDM is a Multistage Process: Evidence and Confirmation by Apoptotic Studies, Induction of Intermediates and Electron Microscopy

Author(s): S. Vassiliadis | V. Dragiotis | E. Protopapadakis | I. Athanassakis | P. Mitlianga | K. Konidaris | G. K. Papadopoulos
Non-Coding RNAs in Retinal Development

Author(s): Nicola A. Maiorano | Robert Hindges
Molecular modeling of DICER and identification of phosphorylation sites

Author(s): Priyanka Dhar* | Abhijit Datta | Sayak Ganguli
CDNA library from the Latex of Hevea brasiliensis

Author(s): Wilaiwan Chotigeat | Sarapee Duangchu | Amornrat Phongdara
Seleção em gradiente de Percoll® sobre os parâmetros espermáticos do sêmen bovino congelado Selection bovine frozen semen in Percoll® gradient on spermatic parameters

Author(s): Carmem Estefânia Serra Neto Zúccari | Paula Rosa Carrijo | Patrícia Arakaki Leite | Paulo Roberto Rojas Scaldelai | Norma Cléa Mesquita Rodovalho | Carlos Alberto Zanenga | Charles Kiefer | Eliane Vianna da Costa e Silva
Impact of glucotoxicity induced in vivo and in vitro in Psammomys obesus

Author(s): Kacimi Ghouti | Sahraoui Abdelhamid | Haffaf El Mahdi | Aouichat Bouguerra Souhila | Benazzoug Yasmina | Boumaza Saliha | Smail Leila | Berdja Sihem | Othmani Kheira | Hamlat Nadjiba | Neggazi Samia
Impact of glucotoxicity induced in vivo and in vitro in Psammomys obesus

Author(s): Kacimi Ghouti | Sahraoui Abdelhamid | Haffaf El Mahdi | Aouichat Bouguerra Souhila | Benazzoug Yasmina | Boumaza Saliha | Smail Leila | Berdja Sihem | Othmani Kheira | Hamlat Nadjiba | Neggazi Samia
Molecular Functions of Long Non-Coding RNAs in Plants

Author(s): Qian-Hao Zhu | Ming-Bo Wang
α-Mangostin Enhances Betulinic Acid Cytotoxicity and Inhibits Cisplatin Cytotoxicity on HCT 116 Colorectal Carcinoma Cells

Author(s): Abdalrahim F. A. Aisha | Khalid M. Abu-Salah | Zhari Ismail | Amin Malik Shah Abdul Majid
Yeast telomeres: how to ignore essential double-strand DNA breaks?

Author(s): Lubomir Tomaska | Judita Sadovska | Jozef Nosek | Jack D. Griffith
Proteomika proteaz na przykładzie możliwej roli MMP-9 w plastyczności synaptycznej*

Author(s): Piotr Michaluk | Marcin Rylski | Leszek Kaczmarek
Tight associations between transcription promoter type and epigenetic variation in histone positioning and modification

Author(s): Nozaki Tadasu | Yachie Nozomu | Ogawa Ryu | Kratz Anton | Saito Rintaro | Tomita Masaru
Epigenetic regulation of caloric restriction in aging

Author(s): Li Yuanyuan | Daniel Michael | Tollefsbol Trygve
The effect of the histone deacetylase inhibitor M344 on BRCA1 expression in breast and ovarian cancer cells

Author(s): Weberpals Johanne | O'Brien Anna | Niknejad Nima | Garbuio Kyla | Clark-Knowles Katherine | Dimitroulakos Jim
Plumbagin inhibits invasion and migration of breast and gastric cancer cells by downregulating the expression of chemokine receptor CXCR4

Author(s): Manu Kanjoormana | Shanmugam Muthu | Rajendran Peramaiyan | Li Feng | Ramachandran Lalitha | Hay Hui | Kannaiyan Radhamani | Swamy Shivananju | Vali Shireen | Kapoor Shweta | Ramesh Bhargavi | Bist Pradeep | Koay Evelyn | Lim Lina | Ahn Kwang | Kumar Alan | Sethi Gautam
Application of Celluspots peptide arrays for the analysis of the binding specificity of epigenetic reading domains to modified histone tails

Author(s): Bock Ina | Kudithipudi Srikanth | Tamas Raluca | Kungulovski Goran | Dhayalan Arunkumar | Jeltsch Albert
Cruciform structures are a common DNA feature important for regulating biological processes

Author(s): Brázda Václav | Laister Rob | Jagelská Eva | Arrowsmith Cheryl
Does weight loss improve semen quality and reproductive hormones? results from a cohort of severely obese men

Author(s): Håkonsen Linn | Thulstrup Ane | Aggerholm Anette | Olsen Jørn | Bonde Jens | Andersen Claus | Bungum Mona | Ernst Emil | Hansen Mette | Ernst Erik | Ramlau-Hansen Cecilia
Regulation of the BRCA1 gene by an SRC3/53BP1 complex

Author(s): Corkery Dale | Thillainadesan Gobi | Coughlan Niamh | Mohan Ryan | Isovic Majdina | Tini Marc | Torchia Joseph
Sirtuin-mediated nuclear differentiation and programmed degradation in Tetrahymena

Author(s): Slade Kristin | Freggiaro Sydney | Cottrell Kyle | Smith Joshua | Wiley Emily
MiR-185 Targets the DNA Methyltransferases 1 and Regulates Global DNA Methylation in human glioma

Author(s): Zhang Zuping | Tang Hailin | Wang Zeyou | Zhang Baoxin | Liu Wei | Lu Hongmei | Xiao Lan | Liu Xiaoping | Wang Rong | Li Xiaoling | Wu Minghua | Li Guiyuan
Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast

Author(s): Deniz Özgen | Flores Oscar | Battistini Federica | Pérez Alberto | Soler-López Montserrat | Orozco Modesto
Combination of suberoylanilide hydroxamic acid with heavy ion therapy shows promising effects in infantile sarcoma cell lines

Author(s): Oertel Susanne | Thiemann Markus | Richter Karsten | Weber Klaus-J | Huber Peter | Perez Ramon | Brons Stephan | Bischof Marc | Kulozik Andreas | Ehemann Volker | Debus Jürgen | Blattmann Claudia
Differential chromatin proteomics of the MMS-induced DNA damage response in yeast

Author(s): Kim Dong | Gidvani Rohan | Ingalls Brian | Duncker Bernard | McConkey Brendan
Cis-regulatory functions of overlapping HIF-1alpha/E-box/AP-1-like sequences of CD164

Author(s): Tang Jingqun | Luo Zhaohui | Zhou Guangqian | Song Chao | Yu Fenglei | Xiang Juanjuan | Li Gang
Three-dimensional modeling of chromatin structure from interaction frequency data using Markov chain Monte Carlo sampling

Author(s): Rousseau Mathieu | Fraser James | Ferraiuolo Maria | Dostie Josée | Blanchette Mathieu
Cancer associated epigenetic transitions identified by genome-wide histone methylation binding profiles in human colorectal cancer samples and paired normal mucosa

Author(s): Enroth Stefan | Rada-Iglesisas Alvaro | Andersson Robin | Wallerman Ola | Wanders Alkwin | Påhlman Lars | Komorowski Jan | Wadelius Claes
Chromatin Structure Following UV-Induced DNA Damage—Repair or Death?

Author(s): Andrew W. Farrell | Gary M. Halliday | James Guy Lyons
Endothelial cell apoptosis in brown adipose tissue of rats induced by hyperinsulinaemia: the possible role of TNF-α

Author(s): M. Markelic | K. Velickovic | I. Golic | V. Otasevic | A. Stancic | A. Jankovic | M. Vucetic | B. Buzadzic | B. Korac | A. Korac
Dynamic nature of active chromatin hubs

Author(s): Gavrilov A. A. | Philonenko E. S. | Iarovaia O. V. | Razin S. V.
The evaluation of anti-UV effect of silymarin cream based on clinical and pathological findings

Author(s): Ahmadi-Ashtiani HR | Hekmat-Nazemi N | Rezazadeh Sh | Gholamhoseini B | Baghaei M | Houshang Ehsani A | Rastegar H
Control of V(D)J Recombination through Transcriptional Elongation and Changes in Locus Chromatin Structure and Nuclear Organization

Author(s): Beatriz del Blanco | Vanina García | Alberto García-Mariscal | Cristina Hernández-Munain
Sirtuins: Molecular Traffic Lights in the Crossroad of Oxidative Stress, Chromatin Remodeling, and Transcription

Author(s): Ramkumar Rajendran | Richa Garva | Marija Krstic-Demonacos | Constantinos Demonacos
In vitro Evaluation of Cytarabin Induced Apoptosis in Leukemic Blasts

Author(s): Tahereh Zieh | Asghar Safarifard | Mahin Nikogoftar
REHYDRATION OF AIR-DRIED CERVICAL SMEARS: AN ALTERNATIVE TO ROUTINE WET FIXATION

Author(s): A. Zare-Mirzaie | K. Khalili-Alam M. Abolhasani
Increase in Docetaxel-Resistance of Ovarian Carcinoma-Derived RMG-1 Cells with Enhanced Expression of Lewis Y Antigen

Author(s): Fan Zhang | Juanjuan Liu | Bei Lin | Qing Liu | Yue Zhao | Liancheng Zhu | Yingying Hao | Shulan Zhang | Masao Iwamori
Autophagic degradation of farnesylated prelamin A as a therapeutic approach to lamin-linked progeria

Author(s): V. Cenni | C. Capanni | M. Columbaro | M. Ortolani | M.R. D'Apice | G. Novelli | M. Fini | S. Marmiroli | E. Scarano | N.M. Maraldi | S. Squarzoni | S. Prencipe | G. Lattanzi
Nuclei of Tsuga canadensis: Role of Flavanols in Chromatin Organization

Author(s): Walter Feucht | Markus Schmid | Dieter Treutter
Agrobacterium rhizogene guided anti-cancer potential of Rhinacanthus nasutus in Hep2 tumor cell line

Author(s): Kandasamy Palanivel 1, Thangarajan Gouthaman 2, Balasubramanian Vani 3, Balamuthu Kadalmani 1*, Mandali Venkateswara Rao 4
Antitumor activity of B-phycoerythrin from Porphyridium cruentum

Author(s): Kaledona M. Minkova1*, Reneta A. Toshkova2, Elena G. Gardeva2, Magdalena I. Tchorbadjieva3, Natalia J. Ivanova 1, Liliya S. Yossifova 2, Liliana G. Gigova 1
Constitutive heterochromatin polymorphisms in human chromosomes identified by whole comparative genomic hybridization

Author(s): M.I. Dávila-Rodríguez | Elva I. Cortés-Gutiérrez | R.M. Cerda Flores | M. Pita | J.L. Fernández | C. López-Fernández | J. Gosálvez
Localization of DNA methyltransferase-1 during oocyte differentiation, in vitro maturation and early embryonic development in cow

Author(s): V. Lodde | S. C. Modina | F. Franciosi | E. Zuccari | I. Tessaro | A. M. Luciano
Nuclei of aged myofibres undergo structural and functional changes suggesting impairment in RNA processing

Author(s): M Malatesta | F Perdoni | S Muller | C Zancanaro | C Pellicciari
Epigenetics, Nervous System Tumors, and Cancer Stem Cells

Author(s): Irfan A. Qureshi | Mark F. Mehler
Non-Hodgkin Lymphoma in a Child with Schimke Immuno-Osseous Dysplasia

Author(s): Mitra Basiratnia | Alireza Baradaran-Heravi | Majid Yavarian | Bita Geramizadeh | Mehran Karimi
Histone variant innovation in a rapidly evolving chordate lineage

Author(s): Moosmann Alexandra | Campsteijn Coen | Jansen Pascal | Nasrallah Carole | Raasholm Martina | Stunnenberg Henk | Thompson Eric
A cyclopalladated complex interacts with mitochondrial membrane thiol-groups and induces the apoptotic intrinsic pathway in murine and cisplatin-resistant human tumor cells

Author(s): Serrano Fabiana | Matsuo Alisson | Monteforte Priscila | Bechara Alexandre | Smaili Soraya | Santana Débora | Rodrigues Tiago | Pereira Felipe | Silva Luis | Machado Joel | Santos Edson | Pesquero João | Martins Rafael | Travassos Luiz | Caires Antonio | Rodrigues Elaine
Tip60-mediated acetylation activates transcription independent apoptotic activity of Abl

Author(s): Jiang Zhihua | Kamath Ravindra | Jin Shunquian | Balasubramani Manimalha | Pandita Tej | Rajasekaran Baskaran
The protocadherins, PCDHB1 and PCDH7, are regulated by MeCP2 in neuronal cells and brain tissues: implication for pathogenesis of Rett syndrome

Author(s): Miyake Kunio | Hirasawa Takae | Soutome Masaki | Itoh Masayuki | Goto Yu-ichi | Endoh Kazushi | Takahashi Kenichiro | Kudo Shinichi | Nakagawa Takayuki | Yokoi Sana | Taira Takahiro | Inazawa Johji | Kubota Takeo
Regulation of the stem cell marker CD133 is independent of promoter hypermethylation in human epithelial differentiation and cancer

Author(s): Pellacani Davide | Packer Richard | Frame Fiona | Oldridge Emma | Berry Paul | Labarthe Marie-Christine | Stower Michael | Simms Matthew | Collins Anne | Maitland Norman
Artemisinin resistance in Plasmodium falciparum is associated with an altered temporal pattern of transcription

Author(s): Mok Sachel | Imwong Mallika | Mackinnon Margaret | Sim Joan | Ramadoss Ramya | Yi Poravuth | Mayxay Mayfong | Chotivanich Kesinee | Liong Kek-Yee | Russell Bruce | Socheat Duong | Newton Paul | Day Nicholas | White Nicholas | Preiser Peter | Nosten François | Dondorp Arjen | Bozdech Zbynek
Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice

Author(s): Coudert Yoan | Bès Martine | Van Anh Le Thi | Pré Martial | Guiderdoni Emmanuel | Gantet Pascal
A gene-rich, transcriptionally active environment and the pre-deposition of repressive marks are predictive of susceptibility to KRAB/KAP1-mediated silencing

Author(s): Meylan Sylvain | Groner Anna | Ambrosini Giovanna | Malani Nirav | Quenneville Simon | Zangger Nadine | Kapopoulou Adamandia | Kauzlaric Annamaria | Rougemont Jacques | Ciuffi Angela | Bushman Frederic | Bucher Philipp | Trono Didier
Histone Deacetylase Inhibitors and Mithramycin A Impact a Similar Neuroprotective Pathway at a Crossroad between Cancer and Neurodegeneration

Author(s): Sama F. Sleiman | Jill Berlin | Manuela Basso | Saravanan S.Karuppagounder | Jürgen Rohr | Rajiv R. Ratan
Complex Alternative Splicing of the Smarca2 Gene Suggests the Importance of Smarca2-B Variants

Author(s): Min Yang, Yuan Sun, Ling Ma, Chenguang Wang, Jian-min Wu, Anding Bi, D. Joshua Liao
Direct Inhibition of RNAse T2 Expression by the HTLV-1 Viral Protein Tax

Author(s): Nicholas Polakowski | Hongjin Han | Isabelle Lemasson
Structural and ultrastructural study of Capsicum annuum leaves after treatment with Uncaria tomentosa bark extracts

Author(s): Teresa Tykarska | Krzysztof Gulewicz | Alicja Zobel | Julita Augustynowicz | Katarzyna Żurowska | Mieczysław Kuraś
RER and protamine-type proteins during Chara tomentosa L. spermiogenesis

Author(s): Maria Kwiatkowska | Katarzyna Popłońska
Are corepressors always repressors?

Author(s): Andrea Hessenauer | Martin Laschak | Klaus-Dieter Spindler
Gene silencing in HIV-1 latency by polycomb repressive group

Author(s): Kim Hyeon | Kim Kyung-Chang | Roh Tae-Young | Park Jihwan | Jung Kyung-Min | Lee Joo-Shil | Choi Sang-Yun | Kim Sung | Choi Byeong-Sun
HIV-1 integrase modulates the interaction of the HIV-1 cellular cofactor LEDGF/p75 with chromatin

Author(s): Astiazaran Paulina | Bueno Murilo | Morales Elisa | Kugelman Jeffrey | Garcia-Rivera Jose | Llano Manuel
In Medicago truncatula, water deficit modulates the transcript accumulation of components of small RNA pathways

Author(s): Capitão Cláudio | Paiva Jorge | Santos Dulce | Fevereiro Pedro
PeakRanger: A cloud-enabled peak caller for ChIP-seq data

Author(s): Feng Xin | Grossman Robert | Stein Lincoln
Plasmablastic lymphoma in the ano-rectal junction presenting in an immunocompetent man: a case report

Author(s): Brahmania Mayur | Sylwesterowic Thomas | Leitch Heather
Human T-Lymphotropic Virus Type 1 transcription and chromatin-remodeling complexes

Author(s): Easley Rebecca | Carpio Lawrence | Guendel Irene | Klase Zachary | Choi Soyun | Kehn-Hall Kylene | Kashanchi Fatah
Features of HTLV-1 transcriptional and chromatin remodeling dynamics emerge from ChIP-chip analysis

Author(s): Heydarian Mohammad | Alani Dowser | Guendel Irene | Van Duyne Rachel | McCaffrey Tim | Fu Sidney | Kehn-Hall Kylene | Kashanchi Fatah
Histone deacetylases (HDACs) in XPC gene silencing and bladder cancer

Author(s): Xu Xiaoxin | Wang Le | Abrams Judith | Wang Gan
ChIP-seq Analysis in R (CSAR): An R package for the statistical detection of protein-bound genomic regions

Author(s): Muiño Jose | Kaufmann Kerstin | van Ham Roeland | Angenent Gerco | Krajewski Pawel
Improved functional overview of protein complexes using inferred epistatic relationships

Author(s): Ryan Colm | Greene Derek | Guénolé Aude | van Attikum Haico | Krogan Nevan | Cunningham Pádraig | Cagney Gerard
Human nucleosomes: special role of CG dinucleotides and Alu-nucleosomes

Author(s): Bettecken Thomas | Frenkel Zakharia | Trifonov Edward
Escherichia coli genome-wide promoter analysis: Identification of additional AtoC binding target elements

Author(s): Pilalis Eleftherios | Chatziioannou Aristotelis | Grigoroudis Asterios | Panagiotidis Christos | Kolisis Fragiskos | Kyriakidis Dimitrios
Lytic HSV-1 infection induces the multifunctional transcription factor Early Growth Response-1 (EGR-1) in rabbit corneal cells

Author(s): Bedadala Gautam | Palem Jayavardhana | Graham Lorna | Hill James | McFerrin Harris | Hsia Shao-Chung
WRKY Transcription Factors Involved in Activation of SA Biosynthesis Genes

Author(s): van Verk Marcel | Bol John | Linthorst Huub
Transcription factors Sp1 and Sp4 regulate TRPV1 gene expression in rat sensory neurons

Author(s): Chu Catherine | Zavala Kathryn | Fahimi Atefeh | Lee Jessica | Xue Qing | Eilers Helge | Schumacher Mark
Evidence of association between Nucleosome Occupancy and the Evolution of Transcription Factor Binding Sites in Yeast

Author(s): Swamy Krishna | Chu Wen-Yi | Wang Chun-Yi | Tsai Huai-Kuang | Wang Daryi
The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

Author(s): Portnoy Thomas | Margeot Antoine | Linke Rita | Atanasova Lea | Fekete Erzsébet | Sándor Erzsébet | Hartl Lukas | Karaffa Levente | Druzhinina Irina | Seiboth Bernhard | Le Crom Stéphane | Kubicek Christian
Dual function of polycomb group proteins in differentiated murine T helper (CD4+) cells

Author(s): Jacob Eyal | Hod-Dvorai Reut | Ben-Mordechai Or | Boyko Yulia | Avni Orly
Close 3D proximity of evolutionary breakpoints argues for the notion of spatial synteny

Author(s): Véron Amélie | Lemaitre Claire | Gautier Christian | Lacroix Vincent | Sagot Marie-France
Concordant and opposite roles of DNA-PK and the "facilitator of chromatin transcription" (FACT) in DNA repair, apoptosis and necrosis after cisplatin

Author(s): Sand-Dejmek Janna | Adelmant Guillaume | Sobhian Bijan | Calkins Anne | Marto Jarrod | Iglehart Dirk | Lazaro Jean-Bernard
Chromatin structure characteristics of pre-miRNA genomic sequences

Author(s): Zhu Shijia | Jiang Qinghua | Wang Guohua | Liu Bo | Teng Mingxiang | Wang Yadong
Gain of DNA methylation is enhanced in the absence of CTCF at the human retinoblastoma gene promoter

Author(s): Dávalos-Salas Mercedes | Furlan-Magaril Mayra | González-Buendía Edgar | Valdes-Quezada Christian | Ayala-Ortega Erandi | Recillas-Targa Félix
Human linker histones: interplay between phosphorylation and O-β-GlcNAc to mediate chromatin structural modifications

Author(s): Ahmad Waqar | Shabbiri Khadija | Nazar Noreen | Nazar Shazia | Qaiser Saba | Shabbir Mughal Mirza
HIV associated dementia and HIV encephalitis II: Genes on chromosome 22 expressed in individually microdissected Globus pallidus neurons (Preliminary analysis)

Author(s): Paul Shapshak | Robert Duncan | Pandajarasamme Kangueane | Charurut Somboonwit | John Sinnott | Deborah Commins | Elyse Singer | Andrew Levine
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