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Search Articles for "copy number variation"

ProSeeK: A web server for MLPA probe design

Author(s): Pantano Lorena | Armengol Lluís | Villatoro Sergi | Estivill Xavier
Estimation of tumor heterogeneity using CGH array data

Author(s): Wang Kai | Li Jian | Li Shengting | Bolund Lars | Wiuf Carsten
Copy number variation in African Americans

Author(s): McElroy Joseph | Nelson Matthew | Caillier Stacy | Oksenberg Jorge
Copy number variation in the bovine genome

Author(s): Fadista João | Thomsen Bo | Holm Lars-Erik | Bendixen Christian
DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing

Author(s): Castle John | Biery Matthew | Bouzek Heather | Xie Tao | Chen Ronghua | Misura Kira | Jackson Stuart | Armour Christopher | Johnson Jason | Rohl Carol | Raymond Christopher
Genomic alterations of primary tumor and blood in invasive ductal carcinoma of breast

Author(s): Bae Ja | Choi Jin | Baik Seung | Park Woo | Song Byung | Kim Jeong | Lim Young | Jung Sang
An initial map of chromosomal segmental copy number variations in the chicken

Author(s): Wang Xiaofei | Nahashon Samuel | Feaster Tromondae | Bohannon-Stewart Ann | Adefope Nathaniel
R-Gada: a fast and flexible pipeline for copy number analysis in association studies

Author(s): Pique-Regi Roger | Cáceres Alejandro | González Juan
TSPY and Male Fertility

Author(s): Csilla Krausz | Claudia Giachini | Gianni Forti
Comparative evolutionary analysis of MADS-box genes in Arabidopsis thaliana and A. lyrata

Author(s): Haoyue Xue | Guixia Xu | Chunce Guo | Hongyan Shan | Hongzhi Kong
Copy number variation in the porcine genome inferred from a 60 k SNP BeadChip

Author(s): Ramayo-Caldas Yuliaxis | Castelló Anna | Pena Romi | Alves Estefania | Mercadé Anna | Souza Carla | Fernández Ana | Perez-Enciso Miguel | Folch Josep
Expression, tandem repeat copy number variation and stability of four macrosatellite arrays in the human genome

Author(s): Tremblay Deanna | Alexander Graham | Moseley Shawn | Chadwick Brian
Normalization of array-CGH data: influence of copy number imbalances

Author(s): Staaf Johan | Jönsson Göran | Ringnér Markus | Vallon-Christersson Johan
Directional and balancing selection in human beta-defensins

Author(s): Hollox Edward | Armour John
Copy-number variation in BMPR2 is not associated with the pathogenesis of pulmonary arterial hypertension

Author(s): Johnson Jennifer | Vnencak-Jones Cindy | Cogan Joy | Loyd James | West James
Association study of SHANK3 gene polymorphisms with autism in Chinese Han population

Author(s): Qin Jian | Jia Meixiang | Wang Lifang | Lu Tianlan | Ruan Yan | Liu Jing | Guo Yanqing | Zhang Jishui | Yang Xiaoling | Yue Weihua | Zhang Dai
Quadruplex MAPH: improvement of throughput in high-resolution copy number screening

Author(s): Tyson Jess | Majerus Tamsin | Walker Susan | Armour John
Microarray-based gene expression profiling and DNA copy number variation analysis of temporal fossa arachnoid cysts

Author(s): Aarhus Mads | Helland Christian | Lund-Johansen Morten | Wester Knut | Knappskog Per
JISTIC: Identification of Significant Targets in Cancer

Author(s): Sanchez-Garcia Felix | Akavia Uri David | Mozes Eyal | Pe'er Dana
Genome-wide joint SNP and CNV analysis of aortic root diameter in African Americans: the HyperGEN study

Author(s): Wineinger Nathan | Patki Amit | Meyers Kristin | Broeckel Ulrich | Gu Charles | Rao DC | Devereux Richard | Arnett Donna | Tiwari Hemant
Detection of genome-wide polymorphisms in the AT-rich Plasmodium falciparum genome using a high-density microarray

Author(s): Jiang Hongying | Yi Ming | Mu Jianbing | Zhang Louie | Ivens Al | Klimczak Leszek | Huyen Yentram | Stephens Robert | Su Xin-zhuan
Evolutionary analysis of the highly dynamic CHEK2 duplicon in anthropoids

Author(s): Münch Claudia | Kirsch Stefan | Fernandes António | Schempp Werner
Transcriptomic responses to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in liver: Comparison of rat and mouse

Author(s): Boutros Paul | Yan Rui | Moffat Ivy | Pohjanvirta Raimo | Okey Allan
Copy number variations (CNVs) identified in Korean individuals

Author(s): Kang Tae-Wook | Jeon Yeo-Jin | Jang Eunsu | Kim Hee-Jin | Kim Jeong-Hwan | Park Jong-Lyul | Lee Siwoo | Kim Yong | Kim Jong | Kim Seon-Young
Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios

Author(s): Staaf Johan | Vallon-Christersson Johan | Lindgren David | Juliusson Gunnar | Rosenquist Richard | Höglund Mattias | Borg Åke | Ringnér Markus
Analysis of the largest tandemly repeated DNA families in the human genome

Author(s): Warburton Peter | Hasson Dan | Guillem Flavia | Lescale Chloe | Jin Xiaoping | Abrusan Gyorgy
Comparative genomics of wild type yeast strains unveils important genome diversity

Author(s): Carreto Laura | Eiriz Maria | Gomes Ana | Pereira Patrícia | Schuller Dorit | Santos Manuel
Genomic plasticity of the immune-related Mhc class I B region in macaque species

Author(s): Bonhomme Maxime | Doxiadis Gaby | Heijmans Corrine | Vervoort Virginie | Otting Nel | Bontrop Ronald | Crouau-Roy Brigitte
A novel custom high density-comparative genomic hybridization array detects common rearrangements as well as deep intronic mutations in dystrophinopathies

Author(s): Bovolenta Matteo | Neri Marcella | Fini Sergio | Fabris Marina | Trabanelli Cecilia | Venturoli Anna | Martoni Elena | Bassi Elena | Spitali Pietro | Brioschi Simona | Falzarano Maria | Rimessi Paola | Ciccone Roberto | Ashton Emma | McCauley Joanne | Yau Shu | Abbs Stephen | Muntoni Francesco | Merlini Luciano | Gualandi Francesca | Ferlini Alessandra
Genomic complexity of the variable region-containing chitin-binding proteins in amphioxus

Author(s): Dishaw Larry | Mueller M Gail | Gwatney Natasha | Cannon John | Haire Robert | Litman Ronda | Amemiya Chris | Ota Tatsuya | Rowen Lee | Glusman Gustavo | Litman Gary
Intragenic tandem repeat variation between Legionella pneumophila strains

Author(s): Coil David | Vandersmissen Liesbeth | Ginevra Christophe | Jarraud Sophie | Lammertyn Elke | Anné Jozef
Evolution of ribosomal DNA-derived satellite repeat in tomato genome

Author(s): Jo Sung-Hwan | Koo Dal-Hoe | Kim Jihyun | Hur Cheol-Goo | Lee Sanghyeob | Yang Tae-jin | Kwon Suk-Yoon | Choi Doil
Data Integration in Genetics and Genomics: Methods and Challenges

Author(s): Jemila S. Hamid | Pingzhao Hu | Nicole M. Roslin | Vicki Ling | Celia M. T. Greenwood | Joseph Beyene
Genomic and systems evolution in Vibrionaceae species

Author(s): Gu Jianying | Neary Jennifer | Cai Hong | Moshfeghian Audrey | Rodriguez Stephen | Lilburn Timothy | Wang Yufeng
Definition, conservation and epigenetics of housekeeping and tissue-enriched genes

Author(s): She Xinwei | Rohl Carol | Castle John | Kulkarni Amit | Johnson Jason | Chen Ronghua
The components of the Daphnia pulex immune system as revealed by complete genome sequencing

Author(s): McTaggart Seanna | Conlon Claire | Colbourne John | Blaxter Mark | Little Tom
The evolutionary dynamics of the Helena retrotransposon revealed by sequenced Drosophila genomes

Author(s): Granzotto Adriana | Lopes Fabrício | Lerat Emmanuelle | Vieira Cristina | Carareto Claudia
Comparative genomics in chicken and Pekin duck using FISH mapping and microarray analysis

Author(s): Skinner Benjamin | Robertson Lindsay | Tempest Helen | Langley Elizabeth | Ioannou Dimitris | Fowler Katie | Crooijmans Richard | Hall Anthony | Griffin Darren | Völker Martin
Gene copy number variation throughout the Plasmodium falciparum genome

Author(s): Cheeseman Ian | Gomez-Escobar Natalia | Carret Celine | Ivens Alasdair | Stewart Lindsay | Tetteh Kevin | Conway David
Sampling nucleotide diversity in cotton

Author(s): Van Deynze Allen | Stoffel Kevin | Lee Mike | Wilkins Thea | Kozik Alexander | Cantrell Roy | Yu John | Kohel Russel | Stelly David
Population diversity and antibody selective pressure to Plasmodium falciparum MSP1 block2 locus in an African malaria-endemic setting

Author(s): Noranate Nitchakarn | Prugnolle Franck | Jouin Hélène | Tall Adama | Marrama Laurence | Sokhna Cheikh | Ekala Marie-Thérèse | Guillotte Micheline | Bischoff Emmanuel | Bouchier Christiane | Patarapotikul Jintana | Ohashi Jun | Trape Jean-François | Rogier Christophe | Mercereau-Puijalon Odile
An experimental loop design for the detection of constitutional chromosomal aberrations by array CGH

Author(s): Allemeersch Joke | Van Vooren Steven | Hannes Femke | De Moor Bart | Vermeesch Joris | Moreau Yves
RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation

Author(s): Piriyapongsa Jittima | Ngamphiw Chumpol | Assawamakin Anunchai | Wangkumhang Pongsakorn | Suwannasri Payiarat | Ruangrit Uttapong | Agavatpanitch Gallissara | Tongsima Sissades
Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome

Author(s): Amid Clara | Rehaume Linda | Brown Kelly | Gilbert James | Dougan Gordon | Hancock Robert | Harrow Jennifer
Chloroplast genome sequence of the moss Tortula ruralis: gene content, polymorphism, and structural arrangement relative to other green plant chloroplast genomes

Author(s): Oliver Melvin | Murdock Andrew | Mishler Brent | Kuehl Jennifer | Boore Jeffrey | Mandoli Dina | Everett Karin | Wolf Paul | Duffy Aaron | Karol Kenneth
Constitutively overexpressed 21 kDa protein in Hodgkin lymphoma and aggressive non-Hodgkin lymphomas identified as cytochrome B5b (CYB5B)

Author(s): Murphy Derek | Parker Jeremy | Zhou Minglong | Fadlelmola Faisal | Steidl Christian | Karsan Aly | Gascoyne Randy | Chen Hong | Banerjee Diponkar
CNV Workshop: an integrated platform for high-throughput copy number variation discovery and clinical diagnostics

Author(s): Gai Xiaowu | Perin Juan | Murphy Kevin | O'Hara Ryan | D'arcy Monica | Wenocur Adam | Xie Hongbo | Rappaport Eric | Shaikh Tamim | White Peter
Role of Receptor-Interacting Protein 140 in human fat cells

Author(s): Mejhert Niklas | Laurencikiene Jurga | Pettersson Amanda | Kaaman Maria | Stenson Britta | Rydén Mikael | Dahlman Ingrid
Copy number variation in the genomes of twelve natural isolates of Caenorhabditis elegans

Author(s): Maydan Jason | Lorch Adam | Edgley Mark | Flibotte Stephane | Moerman Donald
Using Chloroplast trnF Pseudogenes for Phylogeography in Arabidopsis Lyrata

Author(s): Andrew Tedder | Peter N. Hoebe | Stephen W. Ansell | Barbara K. Mable
Identification of copy number variations and common deletion polymorphisms in cattle

Author(s): Bae Joon | Cheong Hyun | Kim Lyoung | NamGung Suk | Park Tae | Chun Ji-Yong | Kim Jason | Pasaje Charisse | Lee Jin | Shin Hyoung
A copy number variation in human NCF1 and its pseudogenes

Author(s): Brunson Tiffany | Wang Qingwei | Chambers Isfahan | Song Qing
8p23.1 duplication syndrome differentiated from copy number variation of the defensin cluster at prenatal diagnosis in four new families

Author(s): Barber John | Bunyan Dave | Curtis Merryl | Robinson Denise | Morlot Susanne | Dermitzel Anette | Liehr Thomas | Alves Claudia | Trindade Joana | Paramos Ana | Cooper Clare | Ocraft Kevin | Taylor Emma-Jane | Maloney Viv
Identical repeated backbone of the human genome

Author(s): Zepeda-Mendoza Cinthya | Lemus Tzitziki | Yáñez Omar | García Delfino | Valle-García David | Meza-Sosa Karla | Gutiérrez-Arcelus María | Márquez-Ortiz Yamile | Domínguez-Vidaña Rocío | Gonzaga-Jauregui Claudia | Flores Margarita | Palacios Rafael
Genetic Structure of the Spanish Population

Author(s): Gayán Javier | Galan José | González-Pérez Antonio | Sáez María | Martínez-Larrad María | Zabena Carina | Rivero M Carmen | Salinas Ana | Ramírez-Lorca Reposo | Morón Francisco | Royo Jose | Moreno-Rey Concha | Velasco Juan | Carrasco José | Molero Eva | Ochoa Carolina | Ochoa María | Gutiérrez Marta | Reina Mercedes | Pascual Rocío | Romo-Astorga Alejandro | Susillo-González Juan | Vázquez Enrique | Real Luis | Ruiz Agustín | Serrano-Ríos Manuel
Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data

Author(s): Luo Huaien | Li Juntao | Eshaghi Majid | Liu Jianhua | Karuturi R Krishna
Distinct high resolution genome profiles of early onset and late onset colorectal cancer integrated with gene expression data identify candidate susceptibility loci

Author(s): Berg Marianne | Ågesen Trude | Thiis-Evensen Espen | Merok Marianne | Teixeira Manuel | Vatn Morten | Nesbakken Arild | Skotheim Rolf | Lothe Ragnhild
Copy number variation and cytidine analogue cytotoxicity: A genome-wide association approach

Author(s): Kalari Krishna | Hebbring Scott | Chai High | Li Liang | Kocher Jean-Pierre | Wang Liewei | Weinshilboum Richard
CONAN: copy number variation analysis software for genome-wide association studies

Author(s): Forer Lukas | Schönherr Sebastian | Weissensteiner Hansi | Haider Florian | Kluckner Thomas | Gieger Christian | Wichmann Heinz-Erich | Specht Günther | Kronenberg Florian | Kloss-Brandstätter Anita
Plasmodium falciparum population dynamics in a cohort of pregnant women in Senegal

Author(s): Guitard Juliette | Andersen Pernille | Ermont Caroline | Gnidehou Sédami | Fievet Nadine | Lund Ole | Deloron Philippe | Ndam Nicaise
CNstream: A method for the identification and genotyping of copy number polymorphisms using Illumina microarrays

Author(s): Alonso Arnald | Julià Antonio | Tortosa Raül | Canaleta Cristina | Cañete Juan | Ballina Javier | Balsa Alejandro | Tornero Jesús | Marsal Sara
NU-IN: Nucleotide evolution and input module for the EvolSimulator genome simulation platform

Author(s): Dlugosch Katrina | Barker Michael | Rieseberg Loren
Copy number variation of the SELENBP1 gene in schizophrenia

Author(s): Amar Shirly | Ovadia Ofer | Maier Wolfgang | Ebstein Richard | Belmaker RH | Mishmar Dan | Agam Galila
Copy number variation at leptin receptor gene locus associated with metabolic traits and the risk of type 2 diabetes mellitus

Author(s): Jeon Jae-Pil | Shim Sung-Mi | Nam Hye-Young | Ryu Gil-Mi | Hong Eun-Jung | Kim Hyung-Lae | Han Bok-Ghee
Expansion and subfunctionalisation of flavonoid 3',5'-hydroxylases in the grapevine lineage

Author(s): Falginella Luigi | Castellarin Simone | Testolin Raffaele | Gambetta Gregory | Morgante Michele | Di Gaspero Gabriele
Similar patterns of rDNA evolution in synthetic and recently formed natural populations of Tragopogon (Asteraceae) allotetraploids

Author(s): Malinska Hana | Tate Jennifer | Matyasek Roman | Leitch Andrew | Soltis Douglas | Soltis Pamela | Kovarik Ales
Population-based study of genetic variation in individuals with autism spectrum disorders from Croatia

Author(s): Wang Li-San | Hranilovic Dubravka | Wang Kai | Lindquist Ingrid | Yurcaba Lindsay | Petkovic Zorana-Bujas | Gidaya Nicole | Jernej Branimir | Hakonarson Hakon | Bucan Maja
Integrating epigenomics into pharmacogenomic studies

Author(s): Wei Zhang | R Stephanie Huang | M Eileen Dolan
Strain-specific copy number variation in the intelectin locus on the 129 mouse chromosome 1

Author(s): Lu Zen | di Domenico Alex | Wright Steven | Knight Pamela | Whitelaw C Bruce | Pemberton Alan
Normalization using ploidy and genomic DNA copy number allows absolute quantification of transcripts, proteins and metabolites in cells

Author(s): Shimada Hiroshi | Obayashi Takeshi | Takahashi Naoki | Matsui Minami | Sakamoto Atsushi
Analysis of copy loss and gain variations in Holstein cattle autosomes using BeadChip SNPs

Author(s): Seroussi Eyal | Glick Giora | Shirak Andrey | Yakobson Emanuel | Weller Joel | Ezra Ephraim | Zeron Yoel
Mutation accumulation in Tetrahymena

Author(s): Brito Patrícia | Guilherme Elsa | Soares Helena | Gordo Isabel
Comparative analysis of copy number variation detection methods and database construction

Author(s): Koike Asako | Nishida Nao | Yamashita Daiki | Tokunaga Katsushi
Genomic characteristics of cattle copy number variations

Author(s): Hou Yali | Liu George | Bickhart Derek | Cardone Maria | Wang Kai | Kim Eui-soo | Matukumalli Lakshmi | Ventura Mario | Song Jiuzhou | VanRaden Paul | Sonstegard Tad | Van Tassell Curt
Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays

Author(s): Auer Herbert | Newsom David | Nowak Norma | McHugh Kirk | Singh Sunita | Yu Chack-Yung | Yang Yan | Wenger Gail | Gastier-Foster Julie | Kornacker Karl
Toward accurate high-throughput SNP genotyping in the presence of inherited copy number variation

Author(s): MacConaill Laura | Aldred Micheala | Lu Xincheng | LaFramboise Thomas
Large-scale copy number variants (CNVs): Distribution in normal subjects and FISH/real-time qPCR analysis

Author(s): Qiao Ying | Liu Xudong | Harvard Chansonette | Nolin Sarah | Brown W Ted | Koochek Maryam | Holden Jeanette | Lewis ME Suzanne | Rajcan-Separovic Evica
Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data

Author(s): Baross Ágnes | Delaney Allen | Li H Irene | Nayar Tarun | Flibotte Stephane | Qian Hong | Chan Susanna | Asano Jennifer | Ally Adrian | Cao Manqiu | Birch Patricia | Brown-John Mabel | Fernandes Nicole | Go Anne | Kennedy Giulia | Langlois Sylvie | Eydoux Patrice | Friedman JM | Marra Marco
Epidermal growth factor receptor structural alterations in gastric cancer

Author(s): Moutinho Cátia | Mateus Ana | Milanezi Fernanda | Carneiro Fátima | Seruca Raquel | Suriano Gianpaolo
An accurate method for quantifying and analyzing copy number variation in porcine KIT by an oligonucleotide ligation assay

Author(s): Seo Bo-Young | Park Eung-Woo | Ahn Sung-Jin | Lee Sang-Ho | Kim Jae-Hwan | Im Hyun-Tae | Lee Jun-Heon | Cho In-Cheol | Kong Il-Keun | Jeon Jin-Tae
Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla: Isolation, RFLP marker development, and physical mapping

Author(s): Miller Robert | Bertioli David | Baurens Franc | Santos Candice | Alves Paulo | Martins Natalia | Togawa Roberto | Souza Manoel | Pappas Georgios
Complex aetiology of an apparently Mendelian form of Mental Retardation

Author(s): Beleza-Meireles Ana | Kockum Ingrid | Yuan Qiu-Ping | Picelli Simone | Wetterberg Lennart | Gustavson Karl-Henrik | Schalling Martin
Genomic analysis of the chromosome 15q11-q13 Prader-Willi syndrome region and characterization of transcripts for GOLGA8E and WHCD1L1 from the proximal breakpoint region

Author(s): Jiang Yong-hui | Wauki Kekio | Liu Qian | Bressler Jan | Pan Yanzhen | Kashork Catherine | Shaffer Lisa | Beaudet Arthur
Improved determination of plasmid copy number using quantitative real-time PCR for monitoring fermentation processes

Author(s): Škulj Mihaela | Okršlar Veronika | Jalen Špela | Jevševar Simona | Slanc Petra | Štrukelj Borut | Menart Viktor
Improved detection of global copy number variation using high density, non-polymorphic oligonucleotide probes

Author(s): Shen Fan | Huang Jing | Fitch Karen | Truong Vivi | Kirby Andrew | Chen Wenwei | Zhang Jane | Liu Guoying | McCarroll Steven | Jones Keith | Shapero Michael
Tumor Genome Wide DNA Alterations Assessed by Array CGH in Patients with Poor and Excellent Survival Following Operation for Colorectal Cancer

Author(s): Kristina K. Lagerstedt | Johan Staaf | Göran Jönsson | Elisabeth Hansson | Christina Lönnroth | Ulf Kressner | Lars Lindström | Svante Nordgren | Åke Borg | Kent Lundholm
Whole genome amplification and its impact on CGH array profiles

Author(s): Talseth-Palmer Bente | Bowden Nikola | Hill Alyssa | Meldrum Cliff | Scott Rodney
Critical evaluation of HPV16 gene copy number quantification by SYBR green PCR

Author(s): Roberts Ian | Ng Grace | Foster Nicola | Stanley Margaret | Herdman Michael | Pett Mark | Teschendorff Andrew | Coleman Nicholas
The loci controlling plasticity in flax

Author(s): Bickel CL | Lukacs M | Cullis CA
Amplifications of NCOA3 gene in colorectal cancers in a Chinese population

Author(s): Zhi Li | Zheng-Yu Fang | Yi Ding | Wan-Tong Yao | Yang Yang | Zhong-Qing Zhu | Wen Wang | Qin-Xian Zhang
Use of the MLPA Assay in the Molecular Diagnosis of Gene Copy Number Alterations in Human Genetic Diseases

Author(s): Liborio Stuppia | Ivana Antonucci | Giandomenico Palka | Valentina Gatta
Rapid whole genome optical mapping of Plasmodium falciparum

Author(s): Riley Matthew | Kirkup Benjamin | Johnson Jake | Lesho Emil | Ockenhouse Christian
Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin

Author(s): Rodríguez-Moreno Luis | González Víctor | Benjak Andrej | Martí M Carmen | Puigdomènech Pere | Aranda Miguel | Garcia-Mas Jordi
Mining for genotype-phenotype relations in Saccharomyces using partial least squares

Author(s): Mehmood Tahir | Martens Harald | Sæbø Solve | Warringer Jonas | Snipen Lars
Analysis of high-identity segmental duplications in the grapevine genome

Author(s): Giannuzzi Giuliana | D'Addabbo Pietro | Gasparro Marica | Martinelli Maurizio | Carelli Francesco | Antonacci Donato | Ventura Mario
The landscape of inherited and de novo copy number variants in a plasmodium falciparum genetic cross

Author(s): Samarakoon Upeka | Gonzales Joseph | Patel Jigar | Tan Asako | Checkley Lisa | Ferdig Michael
Targeted high throughput sequencing in clinical cancer Settings: formaldehyde fixed-paraffin embedded (FFPE) tumor tissues, input amount and tumor heterogeneity

Author(s): Kerick Martin | Isau Melanie | Timmermann Bernd | Sültmann Holger | Herwig Ralf | Krobitsch Sylvia | Schaefer Georg | Verdorfer Irmgard | Bartsch Georg | Klocker Helmut | Lehrach Hans | Schweiger Michal
Association between copy number variation of complement component C4 and Graves' disease

Author(s): Liu Yu-Huei | Wan Lei | Chang Chwen-Tzuei | Liao Wen-Ling | Chen Wen-Chi | Tsai Yuhsin | Tsai Chang-Hai | Tsai Fuu-Jen
Rapid evolution and copy number variation of primate RHOXF2, an X-linked homeobox gene involved in male reproduction and possibly brain function

Author(s): Niu Ao-lei | Wang Yin-qiu | Zhang Hui | Liao Cheng-hong | Wang Jin-kai | Zhang Rui | Che Jun | Su Bing
Detection of copy number variations in rice using array-based comparative genomic hybridization

Author(s): Yu Ping | Wang Caihong | Xu Qun | Feng Yue | Yuan Xiaoping | Yu Hanyong | Wang Yiping | Tang Shengxiang | Wei Xinghua
Inferring causal genomic alterations in breast cancer using gene expression data

Author(s): Tran Linh | Zhang Bin | Zhang Zhan | Zhang Chunsheng | Xie Tao | Lamb John | Dai Hongyue | Schadt Eric | Zhu Jun
Artemisinin resistance in Plasmodium falciparum is associated with an altered temporal pattern of transcription

Author(s): Mok Sachel | Imwong Mallika | Mackinnon Margaret | Sim Joan | Ramadoss Ramya | Yi Poravuth | Mayxay Mayfong | Chotivanich Kesinee | Liong Kek-Yee | Russell Bruce | Socheat Duong | Newton Paul | Day Nicholas | White Nicholas | Preiser Peter | Nosten François | Dondorp Arjen | Bozdech Zbynek
Copy number variation of microRNA genes in the human genome

Author(s): Marcinkowska Malgorzata | Szymanski Maciej | Krzyzosiak Wlodzimierz | Kozlowski Piotr
Detection of erbB2 copy number variations in plasma of patients with esophageal carcinoma

Author(s): Andolfo Immacolata | Petrosino Giuseppe | Vecchione Loredana | De Antonellis Pasqualino | Capasso Mario | Montanaro Donatella | Gemei Marica | Troncone Giancarlo | Iolascon Achille | Orditura Michele | Ciardiello Fortunato | De Vita Fernando | Zollo Massimo
Comprehensive assessment of sequence variation within the copy number variable defensin cluster on 8p23 by target enriched in-depth 454 sequencing

Author(s): Taudien Stefan | Szafranski Karol | Felder Marius | Groth Marco | Huse Klaus | Raffaelli Francesca | Petzold Andreas | Zhang Xinmin | Rosenstiel Philip | Hampe Jochen | Schreiber Stefan | Platzer Matthias
A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data

Author(s): González Juan | Rodríguez-Santiago Benjamín | Cáceres Alejandro | Pique-Regi Roger | Rothman Nathaniel | Chanock Stephen | Armengol Lluís | Pérez-Jurado Luis
Comparison of buccal and blood-derived canine DNA, either native or whole genome amplified, for array-based genome-wide association studies

Author(s): Rincon Gonzalo | Tengvall Katarina | Belanger Janelle | Lagoutte Laetitia | Medrano Juan | André Catherine | Thomas Anne | Lawley Cynthia | Hansen Mark | Lindblad-Toh Kerstin | Oberbauer Anita
Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform

Author(s): Eckel-Passow Jeanette | Atkinson Elizabeth | Maharjan Sooraj | Kardia Sharon | de Andrade Mariza
Functional Analysis for Rolling Leaf of Somaclonal Mutants in Rice (Oryza sativa L.)

Author(s): Young-Hie Park | Hyun-Suk Lee | Gi-Hwan Yi | Jae-Keun Sohn | Kyung-Min Kim
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