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BMC Molecular Biology

ISSN: 1471--2199
Publisher: BioMed Central


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TRPC1 transcript variants, inefficient nonsense-mediated decay and low up-frameshift-1 in vascular smooth muscle cells

Author(s): Dedman Alexandra | Majeed Yasser | Tumova Sarka | Zeng Fanning | Kumar Bhaskar | Munsch Christopher | Bateson Alan | Wittmann Jürgen | Jäck Hans-Martin | Porter Karen | Beech David
Volume: 12
Issue: 1
Year: 2011
CGGBP1 regulates cell cycle in cancer cells

Author(s): Singh Umashankar | Roswall Pernilla | Uhrbom Lene | Westermark Bengt
Volume: 12
Issue: 1
Year: 2011
Regulation of bombesin-stimulated cyclooxygenase-2 expression in prostate cancer cells

Author(s): Wen Xiaodong | Chao Celia | Ives Kirk | Hellmich Mark
Volume: 12
Issue: 1
Year: 2011
Liposome-based DNA carriers may induce cellular stress response and change gene expression pattern in transfected cells

Author(s): Fiszer-Kierzkowska Anna | Vydra Natalia | Wysocka-Wycisk Aleksandra | Kronekova Zuzana | Jarząb Michał | Lisowska Katarzyna Marta | Krawczyk Zdzisław
Volume: 12
Issue: 1
Year: 2011
Alternative splicing of the human gene SYBL1 modulates protein domain architecture of longin VAMP7/TI-VAMP, showing both non-SNARE and synaptobrevin-like isoforms

Author(s): Vacca Marcella | Albania Lara | Ragione Floriana | Carpi Andrea | Rossi Valeria | Strazzullo Maria | De Franceschi Nicola | Rossetto Ornella | Filippini Francesco | D'Esposito Maurizio
Volume: 12
Issue: 1
Year: 2011
Exon sequence requirements for excision in vivo of the bacterial group II intron RmInt1

Author(s): Barrientos-Durán Antonio | Chillón Isabel | Martínez-Abarca Francisco | Toro Nicolás
Volume: 12
Issue: 1
Year: 2011
Cell-to-cell diversity in protein levels of a gene driven by a tetracycline inducible promoter

Author(s): Smolander Olli-Pekka | Kandhavelu Meenakshisundaram | Mannerström Henrik | Lihavainen Eero | Kalaichelvan Shanmugapriya | Healy Shannon | Yli-Harja Olli | Karp Matti | Ribeiro Andre
Volume: 12
Issue: 1
Year: 2011
Functional characterization of an alkaline exonuclease and single strand annealing protein from the SXT genetic element of Vibrio cholerae

Author(s): Chen Wen-yang | Ho John | Huang Jian-dong | Watt Rory
Volume: 12
Issue: 1
Year: 2011
GhMPK16, a novel stress-responsive group D MAPK gene from cotton, is involved in disease resistance and drought sensitivity

Author(s): Shi Jing | Zhang Liang | An Hailong | Wu Changai | Guo Xingqi
Volume: 12
Issue: 1
Year: 2011
Functional characterization of the ER stress induced X-box-binding protein-1 (Xbp-1) in the porcine system

Author(s): Zhang Jin-Yu | Lee Kyu-Sun | Kim Ji-Su | Song Bong-Seok | Jin Dong-Il | Koo Deog-Bon | Yu Kweon
Volume: 12
Issue: 1
Year: 2011
Recombination phenotypes of the NCI-60 collection of human cancer cells

Author(s): Stults Dawn | Killen Michael | Shelton Brent | Pierce Andrew
Volume: 12
Issue: 1
Year: 2011
Clarifying mammalian RISC assembly in vitro

Author(s): Tan Grace | Garchow Barry | Liu Xuhang | Metzler David | Kiriakidou Marianthi
Volume: 12
Issue: 1
Year: 2011
Novel reference genes for quantifying transcriptional responses of Escherichia coli to protein overexpression by quantitative PCR

Author(s): Zhou Kang | Zhou Lihan | Lim Qing | Zou Ruiyang | Stephanopoulos Gregory | Too Heng-Phon
Volume: 12
Issue: 1
Year: 2011
The four Zn fingers of MBNL1 provide a flexible platform for recognition of its RNA binding elements

Author(s): Cass Danielle | Hotchko Rachel | Barber Paul | Jones Kimberly | Gates Devika | Berglund J Andrew
Volume: 12
Issue: 1
Year: 2011
RecA Proteins from Deinococcus geothermalis and Deinococcus murrayi - Cloning, Purification and Biochemical Characterisation

Author(s): Wanarska Marta | Krawczyk Beata | Hildebrandt Piotr | Kur Józef
Volume: 12
Issue: 1
Year: 2011
A cDNA microarray, UniShrimpChip, for identification of genes relevant to testicular development in the black tiger shrimp (Penaeus monodon)

Author(s): Leelatanawit Rungnapa | Uawisetwathana Umaporn | Klinbunga Sirawut | Karoonuthaisiri Nitsara
Volume: 12
Issue: 1
Year: 2011
Analysis of the regulation of fatty acid binding protein 7 expression in human renal carcinoma cell lines

Author(s): Takaoka Naohisa | Takayama Tatsuya | Teratani Takumi | Sugiyama Takayuki | Mugiya Soichi | Ozono Seiichiro
Volume: 12
Issue: 1
Year: 2011
Functional characterization of the sciarid BhC4-1 core promoter in transgenic Drosophila

Author(s): Garcia Adriana | Gitaí Daniel | Humann Fernanda | Paçó-Larson Maria | Monesi Nadia
Volume: 12
Issue: 1
Year: 2011
The TPR-containing domain within Est1 homologs exhibits species-specific roles in telomerase interaction and telomere length homeostasis

Author(s): Sealey David | Kostic Aleksandar | LeBel Catherine | Pryde Fiona | Harrington Lea
Volume: 12
Issue: 1
Year: 2011
Cis-regulatory functions of overlapping HIF-1alpha/E-box/AP-1-like sequences of CD164

Author(s): Tang Jingqun | Luo Zhaohui | Zhou Guangqian | Song Chao | Yu Fenglei | Xiang Juanjuan | Li Gang
Volume: 12
Issue: 1
Year: 2011
Characterization of the χψ subcomplex of Pseudomonas aeruginosa DNA polymerase III

Author(s): El Houry Mignan Sirine | Witte Gregor | Naue Natalie | Curth Ute
Volume: 12
Issue: 1
Year: 2011
Profile of small interfering RNAs from cotton plants infected with the polerovirus Cotton leafroll dwarf virus

Author(s): Silva Tatiane | Romanel Elisson | Andrade Roberto | Farinelli Laurent | Østerås Magne | Deluen Cécile | Corrêa Régis | Schrago Carlos | Vaslin Maite
Volume: 12
Issue: 1
Year: 2011
LIM kinase 1 - dependent cofilin 1 pathway and actin dynamics mediate nuclear retinoid receptor function in T lymphocytes

Author(s): Ishaq Mohammad | Lin Bor-Ruei | Bosche Marjorie | Zheng Xin | Yang Jun | Huang Dawei | Lempicki Richard | Natarajan Ven
Volume: 12
Issue: 1
Year: 2011
A small basic protein from the brz-brb operon is involved in regulation of bop transcription in Halobacterium salinarum

Author(s): Tarasov Valery | Schwaiger Rita | Furtwängler Katarina | Dyall-Smith Mike | Oesterhelt Dieter
Volume: 12
Issue: 1
Year: 2011
Cruciform structures are a common DNA feature important for regulating biological processes

Author(s): Brázda Václav | Laister Rob | Jagelská Eva | Arrowsmith Cheryl
Volume: 12
Issue: 1
Year: 2011
Use of Maximum Likelihood-Mixed Models to select stable reference genes: a case of heat stress response in sheep

Author(s): Serrano Magdalena | Moreno-Sánchez Natalia | González Carmen | Marcos-Carcavilla Ane | Van Poucke Mario | Calvo Jorge | Salces Judit | Cubero Jaime | Carabaño María
Volume: 12
Issue: 1
Year: 2011
The effects of stem length and core placement on shRNA activity

Author(s): Mcintyre Glen | Yu Yi-Hsin | Lomas Mehnaaz | Fanning Gregory
Volume: 12
Issue: 1
Year: 2011
Identification of two distinct genes at the vertebrate TRPC2 locus and their characterisation in a marsupial and a monotreme

Author(s): Frankenberg Stephen | Schneider Nanette | Fletcher Terrence | Shaw Geoffrey | Renfree Marilyn
Volume: 12
Issue: 1
Year: 2011
Increased complexity of Tmem16a/Anoctamin 1 transcript alternative splicing

Author(s): O'Driscoll Kate | Pipe Rachel | Britton Fiona
Volume: 12
Issue: 1
Year: 2011
PSMB2 and RPL32 are suitable denominators to normalize gene expression profiles in bronchoalveolar cells

Author(s): Kriegova Eva | Arakelyan Arsen | Fillerova Regina | Zatloukal Jaromir | Mrazek Frantisek | Navratilova Zdenka | Kolek Vitezslav | du Bois Roland | Petrek Martin
Volume: 9
Issue: 1
Year: 2008
Identification of suitable endogenous control genes for microRNA gene expression analysis in human breast cancer

Author(s): Davoren Pamela | McNeill Roisin | Lowery Aoife | Kerin Michael | Miller Nicola
Volume: 9
Issue: 1
Year: 2008
Differential expression of the TFIIIB subunits Brf1 and Brf2 in cancer cells

Author(s): Cabarcas Stephanie | Jacob Joby | Veras Ingrid | Schramm Laura
Volume: 9
Issue: 1
Year: 2008
Statistical modelling of transcript profiles of differentially regulated genes

Author(s): Eastwood Daniel | Mead Andrew | Sergeant Martin | Burton Kerry
Volume: 9
Issue: 1
Year: 2008
In vivo analysis of Caenorhabditis elegans noncoding RNA promoter motifs

Author(s): Li Tiantian | He Housheng | Wang Yunfei | Zheng Haixia | Skogerbø Geir | Chen Runsheng
Volume: 9
Issue: 1
Year: 2008
Housekeeping while brain's storming Validation of normalizing factors for gene expression studies in a murine model of traumatic brain injury

Author(s): Rhinn Hervé | Marchand-Leroux Catherine | Croci Nicole | Plotkine Michel | Scherman Daniel | Escriou Virginie
Volume: 9
Issue: 1
Year: 2008
Expression profiles of the pluripotency marker gene POU5F1 and validation of reference genes in rabbit oocytes and preimplantation stage embryos

Author(s): Mamo Solomon | Gal Arpad | Polgar Zsuzsanna | Dinnyes Andras
Volume: 9
Issue: 1
Year: 2008
Optical mapping discerns genome wide DNA methylation profiles

Author(s): Ananiev Gene | Goldstein Steve | Runnheim Rod | Forrest Dan | Zhou Shiguo | Potamousis Konstantinos | Churas Chris | Bergendahl Veit | Thomson James | Schwartz David
Volume: 9
Issue: 1
Year: 2008
Quantification of mRNA in single cells and modelling of RT-qPCR induced noise

Author(s): Bengtsson Martin | Hemberg Martin | Rorsman Patrik | Ståhlberg Anders
Volume: 9
Issue: 1
Year: 2008
Selection of housekeeping genes for gene expression studies in the adult rat submandibular gland under normal, inflamed, atrophic and regenerative states

Author(s): Silver Nicholas | Cotroneo Emanuele | Proctor Gordon | Osailan Samira | Paterson Katherine | Carpenter Guy
Volume: 9
Issue: 1
Year: 2008
Phosphorylation at Ser473 regulates heterochromatin protein 1 binding and corepressor function of TIF1beta/KAP1

Author(s): Chang Chiung-Wen | Chou Han-Yi | Lin Yu-Sheng | Huang Kuo-Hsiang | Chang Ching-Jin | Hsu Tsui-Chun | Lee Sheng-Chung
Volume: 9
Issue: 1
Year: 2008
Systemic RNAi mediated gene silencing in the anhydrobiotic nematode Panagrolaimus superbus

Author(s): Shannon Adam | Tyson Trevor | Dix Ilona | Boyd Jacqueline | Burnell Ann
Volume: 9
Issue: 1
Year: 2008
Off-target effects of siRNA specific for GFP

Author(s): Tschuch Cordula | Schulz Angela | Pscherer Armin | Werft Wiebke | Benner Axel | Hotz-Wagenblatt Agnes | Barrionuevo Leticia | Lichter Peter | Mertens Daniel
Volume: 9
Issue: 1
Year: 2008
Validation of internal control for gene expression study in soybean by quantitative real-time PCR

Author(s): Jian Bo | Liu Bin | Bi Yurong | Hou Wensheng | Wu Cunxiang | Han Tianfu
Volume: 9
Issue: 1
Year: 2008
LTR retrotransposons and the evolution of dosage compensation in Drosophila

Author(s): Matyunina Lilya | Bowen Nathan | McDonald John
Volume: 9
Issue: 1
Year: 2008
A novel universal real-time PCR system using the attached universal duplex probes for quantitative analysis of nucleic acids

Author(s): Yang Litao | Liang Wanqi | Jiang Lingxi | Li Wenquan | Cao Wei | Wilson Zoe | Zhang Dabing
Volume: 9
Issue: 1
Year: 2008
Selection of reference genes for quantitative real-time PCR in a rat asphyxial cardiac arrest model

Author(s): Langnaese Kristina | John Robin | Schweizer Hannes | Ebmeyer Uwe | Keilhoff Gerburg
Volume: 9
Issue: 1
Year: 2008
IRES-mediated translation of the carboxy-terminal domain of the horizontal cell specific connexin Cx55.5 in vivo and in vitro

Author(s): Ul-Hussain Mahboob | Zoidl Georg | Klooster Jan | Kamermans Maarten | Dermietzel Rolf
Volume: 9
Issue: 1
Year: 2008
Identification of valid reference genes for the normalization of RT qPCR gene expression data in human brain tissue

Author(s): Coulson David | Brockbank Simon | Quinn Joseph | Murphy Suzanne | Ravid Rivka | Irvine G Brent | Johnston Janet
Volume: 9
Issue: 1
Year: 2008
Comparative in silico analysis identifies bona fide MyoD binding sites within the Myocyte Stress 1 gene promoter

Author(s): Ounzain Samir | Dacwag Caroline | Samani Nilesh | Imbalzano Anthony | Chong Nelson
Volume: 9
Issue: 1
Year: 2008
Distinct and stage specific nuclear factors regulate the expression of falcipains, Plasmodium falciparum cysteine proteases

Author(s): Sunil Sujatha | Chauhan Virander | Malhotra Pawan
Volume: 9
Issue: 1
Year: 2008
Exercise induced stress in horses: Selection of the most stable reference genes for quantitative RT-PCR normalization

Author(s): Cappelli Katia | Felicetti Michela | Capomaccio Stefano | Spinsanti Giacomo | Silvestrelli Maurizio | Supplizi Andrea
Volume: 9
Issue: 1
Year: 2008
The BsaHI restriction-modification system: Cloning, sequencing and analysis of conserved motifs

Author(s): Neely Robert | Roberts Richard
Volume: 9
Issue: 1
Year: 2008
Characterization and expression patterns of a membrane-bound trehalase from Spodoptera exigua

Author(s): Tang Bin | Chen Xiaofei | Liu Yang | Tian Honggang | Liu Jian | Hu Jian | Xu Weihua | Zhang Wenqing
Volume: 9
Issue: 1
Year: 2008
Molecular characterization of senescence marker protein-30 gene promoter: Identification of repressor elements and functional nuclear factor binding sites

Author(s): Rath Bandita | Pandey Ravi | Debata Priya | Maruyama Naoki | Supakar Prakash
Volume: 9
Issue: 1
Year: 2008
Mutation detection using ENDO1: Application to disease diagnostics in humans and TILLING and Eco-TILLING in plants

Author(s): Triques Karine | Piednoir Elodie | Dalmais Marion | Schmidt Julien | Le Signor Christine | Sharkey Mark | Caboche Michel | Sturbois Bénédicte | Bendahmane Abdelhafid
Volume: 9
Issue: 1
Year: 2008
A GATA4/WT1 cooperation regulates transcription of genes required for mammalian sex determination and differentiation

Author(s): Miyamoto Yoko | Taniguchi Hiroaki | Hamel Frédéric | Silversides David | Viger Robert
Volume: 9
Issue: 1
Year: 2008
DNA demethylation-dependent enhancement of toll-like receptor-2 gene expression in cystic fibrosis epithelial cells involves SP1-activated transcription

Author(s): Furuta Takashi | Shuto Tsuyoshi | Shimasaki Shogo | Ohira Yuko | Suico Mary | Gruenert Dieter | Kai Hirofumi
Volume: 9
Issue: 1
Year: 2008
Characterization of two functional NKX3.1 binding sites upstream of the PCAN1 gene that are involved in the positive regulation of PCAN1 gene transcription

Author(s): Liu Wenwen | Zhang Pengju | Chen Weiwen | Yu Chunxiao | Cui Fuai | Kong Feng | Zhang Jianye | Jiang Anli
Volume: 9
Issue: 1
Year: 2008
The calcium channel β2 (CACNB2) subunit repertoire in teleosts

Author(s): Ebert Alicia | McAnelly Catherine | Srinivasan Ashok | Mueller Rachel | Garrity David | Garrity Deborah
Volume: 9
Issue: 1
Year: 2008
The Mre11 protein interacts with both Rad50 and the HerA bipolar helicase and is recruited to DNA following gamma irradiation in the archaeon Sulfolobus acidocaldarius

Author(s): Quaiser Achim | Constantinesco Florence | White Malcolm | Forterre Patrick | Elie Christiane
Volume: 9
Issue: 1
Year: 2008
Characterization of the human DYRK1A promoter and its regulation by the transcription factor E2F1

Author(s): Maenz Barbara | Hekerman Paul | Vela Eva | Galceran Juan | Becker Walter
Volume: 9
Issue: 1
Year: 2008
Essential and distinct roles of the F-box and helicase domains of Fbh1 in DNA damage repair

Author(s): Sakaguchi Chikako | Morishita Takashi | Shinagawa Hideo | Hishida Takashi
Volume: 9
Issue: 1
Year: 2008
Transcriptional profile of the homologous recombination machinery and characterization of the EhRAD51 recombinase in response to DNA damage in Entamoeba histolytica

Author(s): López-Casamichana Mavil | Orozco Esther | Marchat Laurence | López-Camarillo César
Volume: 9
Issue: 1
Year: 2008
HMG-box domain stimulation of RAG1/2 cleavage activity is metal ion dependent

Author(s): Kriatchko Aleksei | Bergeron Serge | Swanson Patrick
Volume: 9
Issue: 1
Year: 2008
Ligand-induced sequestering of branchpoint sequence allows conditional control of splicing

Author(s): Kim Dong-Suk | Gusti Veronica | Dery Kenneth | Gaur Rajesh
Volume: 9
Issue: 1
Year: 2008
Association of ATRX with pericentric heterochromatin and the Y chromosome of neonatal mouse spermatogonia

Author(s): Baumann Claudia | Schmidtmann Anja | Muegge Kathrin | De La Fuente Rabindranath
Volume: 9
Issue: 1
Year: 2008
Selection of housekeeping genes for gene expression studies in larvae from flatfish using real-time PCR

Author(s): Infante Carlos | Matsuoka Makoto | Asensio Esther | Cañavate José | Reith Michael | Manchado Manuel
Volume: 9
Issue: 1
Year: 2008
Characterization of human mesenchymal stem cell secretome at early steps of adipocyte and osteoblast differentiation

Author(s): Chiellini Chiara | Cochet Olivia | Negroni Luc | Samson Michel | Poggi Marjorie | Ailhaud Gérard | Alessi Marie-Christine | Dani Christian | Amri Ez-Zoubir
Volume: 9
Issue: 1
Year: 2008
Checkpoint effects and telomere amplification during DNA re-replication in fission yeast

Author(s): Mickle Katie | Oliva Anna | Huberman Joel | Leatherwood Janet
Volume: 8
Issue: 1
Year: 2007
Iron-dependent degradation of IRP2 requires its C-terminal region and IRP structural integrity

Author(s): Wang Jian | Chen Guohua | Lee Julie | Pantopoulos Kostas
Volume: 9
Issue: 1
Year: 2008
Housekeeping genes for quantitative expression studies in the three-spined stickleback Gasterosteus aculeatus

Author(s): Hibbeler Sascha | Scharsack Joern | Becker Sven
Volume: 9
Issue: 1
Year: 2008
Ror2 modulates the canonical Wnt signaling in lung epithelial cells through cooperation with Fzd2

Author(s): Li Changgong | Chen Hongyan | Hu Lingyan | Xing Yiming | Sasaki Tomoyo | Villosis Maria | Li John | Nishita Michiru | Minami Yasuhiro | Minoo Parviz
Volume: 9
Issue: 1
Year: 2008
A direct repeat of E-box-like elements is required for cell-autonomous circadian rhythm of clock genes

Author(s): Nakahata Yasukazu | Yoshida Mayumi | Takano Atsuko | Soma Haruhiko | Yamamoto Takuro | Yasuda Akio | Nakatsu Toru | Takumi Toru
Volume: 9
Issue: 1
Year: 2008
Selection and validation of a set of reliable reference genes for quantitative sod gene expression analysis in C. elegans

Author(s): Hoogewijs David | Houthoofd Koen | Matthijssens Filip | Vandesompele Jo | Vanfleteren Jacques
Volume: 9
Issue: 1
Year: 2008
Alternative splicing and differential subcellular localization of the rat FGF antisense gene product

Author(s): Zhang Shuo | MacDonald Kimberley | Baguma-Nibasheka Mark | Geldenhuys Laurette | Casson Alan | Murphy Paul
Volume: 9
Issue: 1
Year: 2008
Substrate specificity of new methyl-directed DNA endonuclease GlaI

Author(s): Tarasova Galina | Nayakshina Tatiana | Degtyarev Sergey
Volume: 9
Issue: 1
Year: 2008
Expression of yeast lipid phosphatase Sac1p is regulated by phosphatidylinositol-4-phosphate

Author(s): Knödler Andreas | Konrad Gerlinde | Mayinger Peter
Volume: 9
Issue: 1
Year: 2008
A novel mutant of the Sup35 protein of Saccharomyces cerevisiae defective in translation termination and in GTPase activity still supports cell viability

Author(s): Fabret Céline | Cosnier Bruno | Lekomtsev Sergey | Gillet Sylvie | Hatin Isabelle | Le Maréchal Pierre | Rousset Jean
Volume: 9
Issue: 1
Year: 2008
Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis

Author(s): Jin Hailing | Vacic Vladimir | Girke Thomas | Lonardi Stefano | Zhu Jian-Kang
Volume: 9
Issue: 1
Year: 2008
Preamplification techniques for real-time RT-PCR analyses of endomyocardial biopsies

Author(s): Noutsias Michel | Rohde Maria | Block Andrea | Klippert Katrin | Lettau Olga | Blunert Katja | Hummel Michael | Kühl Uwe | Lehmkuhl Hans | Hetzer Roland | Rauch Ursula | Poller Wolfgang | Pauschinger Matthias | Schultheiss Heinz | Volk Hans | Kotsch Katja
Volume: 9
Issue: 1
Year: 2008
Analysis of the transcriptional activity of endogenous NFAT5 in primary cells using transgenic NFAT-luciferase reporter mice

Author(s): Morancho Beatriz | Minguillón Jordi | Molkentin Jeffery | López-Rodríguez Cristina | Aramburu Jose
Volume: 9
Issue: 1
Year: 2008
hMMS2 serves a redundant role in human PCNA polyubiquitination

Author(s): Brun Jan | Chiu Roland | Lockhart Katherine | Xiao Wei | Wouters Bradly | Gray Douglas
Volume: 9
Issue: 1
Year: 2008
Differential regulation of the two transcriptional activation domains of the coiled-coil coactivator CoCoA by sumoylation

Author(s): Yang Catherine | Kim Jeong | Ann David | Stallcup Michael
Volume: 9
Issue: 1
Year: 2008
Specificity of DNA-binding by the FAX-1 and NHR-67 nuclear receptors of Caenorhabditis elegans is partially mediated via a subclass-specific P-box residue

Author(s): DeMeo Stephen | Lombel Rebecca | Cronin Melissa | Smith Eric | Snowflack Danielle | Reinert Kristy | Clever Sheila | Wightman Bruce
Volume: 9
Issue: 1
Year: 2008
Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene

Author(s): Amit Maayan | Sela Noa | Keren Hadas | Melamed Ze'ev | Muler Inna | Shomron Noam | Izraeli Shai | Ast Gil
Volume: 8
Issue: 1
Year: 2007
Tissue factor pathway inhibitor-2 was repressed by CpG hypermethylation through inhibition of KLF6 binding in highly invasive breast cancer cells

Author(s): Guo Hongshen | Lin Yifeng | Zhang Hongwei | Liu Juan | Zhang Nong | Li Yiming | Kong Desheng | Tang Qiqun | Ma Duan
Volume: 8
Issue: 1
Year: 2007
Expression and characterization of novel ovine orthologs of bovine placental prolactin-related proteins

Author(s): Ushizawa Koichi | Takahashi Toru | Hosoe Misa | Ohkoshi Katsuhiro | Hashizume Kazuyoshi
Volume: 8
Issue: 1
Year: 2007
Human NCU-G1 can function as a transcription factor and as a nuclear receptor co-activator

Author(s): Steffensen Knut | Bouzga Mariam | Skjeldal Frode | Kasi Cecilie | Karahasan Almira | Matre Vilborg | Bakke Oddmund | Guérin Sylvain | Eskild Winnie
Volume: 8
Issue: 1
Year: 2007
Long-term stability of RNA in post-mortem bovine skeletal muscle, liver and subcutaneous adipose tissues

Author(s): Bahar Bojlul | Monahan Frank | Moloney Aidan | Schmidt Olaf | MacHugh David | Sweeney Torres
Volume: 8
Issue: 1
Year: 2007
Differential regulation of NAB corepressor genes in Schwann cells

Author(s): Srinivasan Rajini | Jang Sung-Wook | Ward Rebecca | Sachdev Shrikesh | Ezashi Toshihiko | Svaren John
Volume: 8
Issue: 1
Year: 2007
Relative quantification of mRNA: comparison of methods currently used for real-time PCR data analysis

Author(s): Čikoš Štefan | Bukovská Alexandra | Koppel Juraj
Volume: 8
Issue: 1
Year: 2007
Checkpoint independence of most DNA replication origins in fission yeast

Author(s): Mickle Katie | Ramanathan Sunita | Rosebrock Adam | Oliva Anna | Chaudari Amna | Yompakdee Chulee | Scott Donna | Leatherwood Janet | Huberman Joel
Volume: 8
Issue: 1
Year: 2007
Localization of TFIIB binding regions using serial analysis of chromatin occupancy

Author(s): Yochum Gregory | Rajaraman Veena | Cleland Ryan | McWeeney Shannon
Volume: 8
Issue: 1
Year: 2007
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) in Corynebacterium glutamicum

Author(s): Gaigalat Lars | Schlüter Jan-Philip | Hartmann Michelle | Mormann Sascha | Tauch Andreas | Pühler Alfred | Kalinowski Jörn
Volume: 8
Issue: 1
Year: 2007
The 3' untranslated region of human Cyclin-Dependent Kinase 5 Regulatory subunit 1 contains regulatory elements affecting transcript stability

Author(s): Moncini Silvia | Bevilacqua Annamaria | Venturin Marco | Fallini Claudia | Ratti Antonia | Nicolin Angelo | Riva Paola
Volume: 8
Issue: 1
Year: 2007
Transcriptional regulation of human eosinophil RNases by an evolutionary- conserved sequence motif in primate genome

Author(s): Wang Hsiu-Yu | Chang Hao-Teng | Pai Tun-Wen | Wu Chung-I | Lee Yuan-Hung | Chang Yen-Hsin | Tai Hsiu-Ling | Tang Chuan-Yi | Chou Wei-Yao | Chang Margaret
Volume: 8
Issue: 1
Year: 2007
The Varicella-Zoster Virus Immediate-Early 63 protein affects chromatin controlled gene transcription in a cell-type dependent manner

Author(s): Habran Lionel | El Mjiyad Nadia | Di Valentin Emmanuel | Sadzot-Delvaux Catherine | Bontems Sébastien | Piette Jacques
Volume: 8
Issue: 1
Year: 2007
Regulation of poly(ADP-ribose) polymerase-1 (PARP-1) gene expression through the post-translational modification of Sp1: a nuclear target protein of PARP-1

Author(s): Zaniolo Karine | Desnoyers Serge | Leclerc Steeve | Guérin Sylvain
Volume: 8
Issue: 1
Year: 2007
Hfq stimulates the activity of the CCA-adding enzyme

Author(s): Scheibe Marion | Bonin Sonja | Hajnsdorf Eliane | Betat Heike | Mörl Mario
Volume: 8
Issue: 1
Year: 2007
Hepatoma derived growth factor binds DNA through the N-terminal PWWP domain

Author(s): Yang Jun | Everett Allen
Volume: 8
Issue: 1
Year: 2007
Control of gag-pol gene expression in the Candida albicans retrotransposon Tca2

Author(s): Forbes Elaine | Nieduszynska Siân | Brunton Fiona | Gibson Joanne | Glover L Anne | Stansfield Ian
Volume: 8
Issue: 1
Year: 2007
Systematic identification of non-coding RNA 2,2,7-trimethylguanosine cap structures in Caenorhabditis elegans

Author(s): Jia Dong | Cai Lun | He Housheng | Skogerbø Geir | Li Tiantian | Aftab Muhammad | Chen Runsheng
Volume: 8
Issue: 1
Year: 2007
Evaluation and validation of candidate endogenous control genes for real-time quantitative PCR studies of breast cancer

Author(s): McNeill Roisin | Miller Nicola | Kerin Michael
Volume: 8
Issue: 1
Year: 2007
ADAM15 gene structure and differential alternative exon use in human tissues

Author(s): Kleino Iivari | Ortiz Rebekka | Huovila Ari-Pekka
Volume: 8
Issue: 1
Year: 2007
An unusual S-adenosylmethionine synthetase gene from dinoflagellate is methylated

Author(s): Ho Percy | Kong KF | Chan YH | Tsang Jimmy | Wong Joseph
Volume: 8
Issue: 1
Year: 2007
Reciprocal regulation of p63 by C/EBP delta in human keratinocytes

Author(s): Borrelli Serena | Testoni Barbara | Callari Maurizio | Alotto Daniela | Castagnoli Carlotta | Romano Rose-Anne | Sinha Satrajit | Viganò Alessandra | Mantovani Roberto
Volume: 8
Issue: 1
Year: 2007
Detection limits of several commercial reverse transcriptase enzymes: impact on the low- and high-abundance transcript levels assessed by quantitative RT-PCR

Author(s): Levesque-Sergerie Jean-Philippe | Duquette Mathieu | Thibault Catherine | Delbecchi Louis | Bissonnette Nathalie
Volume: 8
Issue: 1
Year: 2007
PlasmaDNA: a free, cross-platform plasmid manipulation program for molecular biology laboratories

Author(s): Angers-Loustau Alexandre | Rainy Jeffrey | Wartiovaara Kirmo
Volume: 8
Issue: 1
Year: 2007
Functional analysis of human mutations in homeodomain transcription factor PITX3

Author(s): Sakazume Satoru | Sorokina Elena | Iwamoto Yoshiki | Semina Elena
Volume: 8
Issue: 1
Year: 2007
Alternative splicing of human peroxisome proliferator-activated receptor delta (PPARdelta):effects on translation efficiency and trans-activation ability

Author(s): Lundell Kerstin | Thulin Petra | Hamsten Anders | Ehrenborg Ewa
Volume: 8
Issue: 1
Year: 2007
Site-specific acetylation of ISWI by GCN5

Author(s): Ferreira Roger | Eberharter Anton | Bonaldi Tiziana | Chioda Mariacristina | Imhof Axel | Becker Peter
Volume: 8
Issue: 1
Year: 2007
Rod-derived Cone Viability Factor-2 is a novel bifunctional-thioredoxin-like protein with therapeutic potential

Author(s): Chalmel Frédéric | Léveillard Thierry | Jaillard Céline | Lardenois Aurélie | Berdugo Naomi | Morel Emmanuelle | Koehl Patrice | Lambrou George | Holmgren Arne | Sahel José | Poch Olivier
Volume: 8
Issue: 1
Year: 2007
Structural and functional analysis of the Entamoeba histolytica EhrabB gene promoter

Author(s): Romero-Díaz Mónica | Gómez Consuelo | López-Reyes Israel | Martínez Máximo | Orozco Esther | Rodríguez Mario
Volume: 8
Issue: 1
Year: 2007
Inactivation of NMD increases viability of sup45 nonsense mutants in Saccharomyces cerevisiae

Author(s): Chabelskaya Svetlana | Gryzina Valentina | Moskalenko Svetlana | Le Goff Catherine | Zhouravleva Galina
Volume: 8
Issue: 1
Year: 2007
Characterization of novel transforming growth factor-beta type I receptors found in malignant pleural effusion tumor cells

Author(s): Chen Kuo-Li | Liu Wan-Hsin | Yang Yi-Yuan | Leu Sy-Jye | Shih Neng-Yao
Volume: 8
Issue: 1
Year: 2007
Enzymes involved in DNA ligation and end-healing in the radioresistant bacterium Deinococcus radiodurans

Author(s): Blasius Melanie | Buob Rebecca | Shevelev Igor | Hubscher Ulrich
Volume: 8
Issue: 1
Year: 2007
Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR

Author(s): Nygard Ann-Britt | Jørgensen Claus | Cirera Susanna | Fredholm Merete
Volume: 8
Issue: 1
Year: 2007
The promoter regions of the Myb-regulated Adora2B and Mcm4 genes co-localize with origins of DNA replication

Author(s): Gundelach Holger | Braas Daniel | Klempnauer Karl-Heinz
Volume: 8
Issue: 1
Year: 2007
HIV-1 TAR element is processed by Dicer to yield a viral micro-RNA involved in chromatin remodeling of the viral LTR

Author(s): Klase Zachary | Kale Prachee | Winograd Rafael | Gupta Madhur | Heydarian Mohammad | Berro Reem | McCaffrey Timothy | Kashanchi Fatah
Volume: 8
Issue: 1
Year: 2007
Expression and functional analysis of TaASY1 during meiosis of bread wheat (Triticum aestivum)

Author(s): Boden Scott | Shadiac Nadim | Tucker Elise | Langridge Peter | Able Jason
Volume: 8
Issue: 1
Year: 2007
Identification of new reference genes for the normalisation of canine osteoarthritic joint tissue transcripts from microarray data

Author(s): Maccoux Lindsey | Clements Dylan | Salway Fiona | Day Philip
Volume: 8
Issue: 1
Year: 2007
Inactivation of nucleolin leads to nucleolar disruption, cell cycle arrest and defects in centrosome duplication

Author(s): Ugrinova Iva | Monier Karine | Ivaldi Corinne | Thiry Marc | Storck Sébastien | Mongelard Fabien | Bouvet Philippe
Volume: 8
Issue: 1
Year: 2007
Somatic CTG•CAG repeat instability in a mouse model for myotonic dystrophy type 1 is associated with changes in cell nuclearity and DNA ploidy

Author(s): van den Broek Walther | Wansink Derick | Wieringa Bé
Volume: 8
Issue: 1
Year: 2007
A flow cytometry technique to study intracellular signals NF-κB and STAT3 in peripheral blood mononuclear cells

Author(s): Lafarge Sandrine | Hamzeh-Cognasse Hind | Chavarin Patricia | Genin Christian | Garraud Olivier | Cognasse Fabrice
Volume: 8
Issue: 1
Year: 2007
In search of suitable reference genes for gene expression studies of human renal cell carcinoma by real-time PCR

Author(s): Jung Monika | Ramankulov Azizbek | Roigas Jan | Johannsen Manfred | Ringsdorf Martin | Kristiansen Glen | Jung Klaus
Volume: 8
Issue: 1
Year: 2007
Transcriptional response of pancreatic beta cells to metabolic stimulation: large scale identification of immediate-early and secondary response genes

Author(s): Glauser Dominique | Brun Thierry | Gauthier Benoit | Schlegel Werner
Volume: 8
Issue: 1
Year: 2007
Mutational pattern and frequency of induced nucleotide changes in mouse ENU mutagenesis

Author(s): Takahasi K Ryo | Sakuraba Yoshiyuki | Gondo Yoichi
Volume: 8
Issue: 1
Year: 2007
GAPDH is not regulated in human glioblastoma under hypoxic conditions

Author(s): Said Harun | Hagemann Carsten | Stojic Jelena | Schoemig Beate | Vince Giles | Flentje Michael | Roosen Klaus | Vordermark Dirk
Volume: 8
Issue: 1
Year: 2007
Histone gene expression and histone mRNA 3' end structure in Caenorhabditis elegans

Author(s): Keall Rebecca | Whitelaw Sandra | Pettitt Jonathan | Müller Berndt
Volume: 8
Issue: 1
Year: 2007
Gene expression profiles in skeletal muscle after gene electrotransfer

Author(s): Hojman Pernille | Zibert John | Gissel Hanne | Eriksen Jens | Gehl Julie
Volume: 8
Issue: 1
Year: 2007
Vertebrate DM domain proteins bind similar DNA sequences and can heterodimerize on DNA

Author(s): Murphy Mark | Zarkower David | Bardwell Vivian
Volume: 8
Issue: 1
Year: 2007
Antisense oligonucleotide induced exon skipping and the dystrophin gene transcript: cocktails and chemistries

Author(s): Adams Abbie | Harding Penny | Iversen Patrick | Coleman Catherine | Fletcher Sue | Wilton Steve
Volume: 8
Issue: 1
Year: 2007
Structural and RNAi characterization of the German cockroach lipophorin receptor, and the evolutionary relationships of lipoprotein receptors

Author(s): Ciudad Laura | Bellés Xavier | Piulachs Maria-Dolors
Volume: 8
Issue: 1
Year: 2007
Hormonal and nutritional regulation of alternative CD36 transcripts in rat liver – a role for growth hormone in alternative exon usage

Author(s): Cheung Louisa | Andersen Malin | Gustavsson Carolina | Odeberg Jacob | Fernández-Pérez Leandro | Norstedt Gunnar | Tollet-Egnell Petra
Volume: 8
Issue: 1
Year: 2007
Biochemical characterization of a recombinant Japanese encephalitis virus RNA-dependent RNA polymerase

Author(s): Kim Yeon-Gu | Yoo Ji-Seung | Kim Jung-Hee | Kim Chan-Mi | Oh Jong-Won
Volume: 8
Issue: 1
Year: 2007
Regulation of p73 by Hck through kinase-dependent and independent mechanisms

Author(s): Paliwal Preeti | Radha Vegesna | Swarup Ghanshyam
Volume: 8
Issue: 1
Year: 2007
Zfra affects TNF-mediated cell death by interacting with death domain protein TRADD and negatively regulates the activation of NF-κB, JNK1, p53 and WOX1 during stress response

Author(s): Hong Qunying | Hsu Li-Jin | Schultz Lori | Pratt Nicole | Mattison Jeffrey | Chang Nan-Shan
Volume: 8
Issue: 1
Year: 2007
Do anesthetics and sampling strategies affect transcription analysis of fish tissues?

Author(s): Olsvik Pål | Lie Kai | Hevrøy Ernst
Volume: 8
Issue: 1
Year: 2007
Mesenchymal stem cells with high telomerase expression do not actively restore their chromosome arm specific telomere length pattern after exposure to ionizing radiation

Author(s): Graakjaer Jesper | Christensen Rikke | Kolvraa Steen | Serakinci Nedime
Volume: 8
Issue: 1
Year: 2007
Selection strategy and the design of hybrid oligonucleotide primers for RACE-PCR: cloning a family of toxin-like sequences from Agelena orientalis

Author(s): Pan Zhensheng | Barry Richard | Lipkin Alexey | Soloviev Mikhail
Volume: 8
Issue: 1
Year: 2007
Transcriptional analysis of an immune-responsive serine protease from Indian malarial vector, Anopheles culicifacies

Author(s): Rodrigues Janneth | Agrawal Neema | Sharma Anil | Malhotra Pawan | Adak Tridibes | Chauhan Virander | Bhatnagar Raj
Volume: 8
Issue: 1
Year: 2007
Exploring cellular memory molecules marking competent and active transcriptions

Author(s): Xin Li | Zhou Guo-Ling | Song Wei | Wu Xue-Song | Wei Gong-Hong | Hao De-Long | Lv Xiang | Liu De-Pei | Liang Chih-Chuan
Volume: 8
Issue: 1
Year: 2007
Duplication of the dystroglycan gene in most branches of teleost fish

Author(s): Pavoni Ernesto | Cacchiarelli Davide | Tittarelli Roberta | Orsini Massimiliano | Galtieri Antonio | Giardina Bruno | Brancaccio Andrea
Volume: 8
Issue: 1
Year: 2007
Important roles of multiple Sp1 binding sites and epigenetic modifications in the regulation of the methionine sulfoxide reductase B1 (MsrB1) promoter

Author(s): De Luca Antonella | Sacchetta Paolo | Nieddu Marzia | Di Ilio Carmine | Favaloro Bartolo
Volume: 8
Issue: 1
Year: 2007
Coordinated regulation of Myc trans-activation targets by Polycomb and the Trithorax group protein Ash1

Author(s): Goodliffe Julie | Cole Michael | Wieschaus Eric
Volume: 8
Issue: 1
Year: 2007
Novel in vivo targets of ΔNp63 in keratinocytes identified by a modified chromatin immunoprecipitation approach

Author(s): Birkaya Barbara | Ortt Kori | Sinha Satrajit
Volume: 8
Issue: 1
Year: 2007
Three novel ABCC5 splice variants in human retina and their role as regulators of ABCC5 gene expression

Author(s): Stojic Jelena | Stöhr Heidi | Weber Bernhard
Volume: 8
Issue: 1
Year: 2007
Leptin induces inflammation-related genes in RINm5F insulinoma cells

Author(s): Hekerman Paul | Zeidler Julia | Korfmacher Stefanie | Bamberg-Lemper Simone | Knobelspies Holger | Zabeau Lennart | Tavernier Jan | Becker Walter
Volume: 8
Issue: 1
Year: 2007
Core histone genes of Giardia intestinalis: genomic organization, promoter structure, and expression

Author(s): Yee Janet | Tang Anita | Lau Wei-Ling | Ritter Heather | Delport Dewald | Page Melissa | Adam Rodney | Müller Miklós | Wu Gang
Volume: 8
Issue: 1
Year: 2007
Amino acids and insulin act additively to regulate components of the ubiquitin-proteasome pathway in C2C12 myotubes

Author(s): Sadiq Fouzia | Hazlerigg David | Lomax Michael
Volume: 8
Issue: 1
Year: 2007
Optimization of laser capture microdissection and RNA amplification for gene expression profiling of prostate cancer

Author(s): Kube Dagmar | Savci-Heijink Cemile | Lamblin Anne-Françoise | Kosari Farhad | Vasmatzis George | Cheville John | Connelly Donald | Klee George
Volume: 8
Issue: 1
Year: 2007
Stripped-down DNA repair in a highly reduced parasite

Author(s): Gill Erin | Fast Naomi
Volume: 8
Issue: 1
Year: 2007
Interaction between ATM and PARP-1 in response to DNA damage and sensitization of ATM deficient cells through PARP inhibition

Author(s): Aguilar-Quesada Rocío | Muñoz-Gámez José | Martín-Oliva David | Peralta Andreína | Valenzuela Ma Teresa | Matínez-Romero Rubén | Quiles-Pérez Rosa | Murcia Josiane | de Murcia Gilbert | de Almodóvar Mariano | Oliver F Javier
Volume: 8
Issue: 1
Year: 2007
The coding/non-coding overlapping architecture of the gene encoding the Drosophila pseudouridine synthase

Author(s): Riccardo Sara | Tortoriello Giuseppe | Giordano Ennio | Turano Mimmo | Furia Maria
Volume: 8
Issue: 1
Year: 2007
Selection of reliable reference genes for qPCR studies on chondroprotective action

Author(s): Toegel Stefan | Huang Wenwen | Piana Claudia | Unger Frank | Wirth Michael | Goldring Mary | Gabor Franz | Viernstein Helmut
Volume: 8
Issue: 1
Year: 2007
Sp1/Sp3 and DNA-methylation contribute to basal transcriptional activation of human podoplanin in MG63 versus Saos-2 osteoblastic cells

Author(s): Hantusch Brigitte | Kalt Romana | Krieger Sigurd | Puri Christina | Kerjaschki Dontscho
Volume: 8
Issue: 1
Year: 2007
NF-κB mediates the transcription of mouse calsarcin-1 gene, but not calsarcin-2, in C2C12 cells

Author(s): Wang Heng | Yang Shulin | Yang E | Zhu Zhengmao | Mu Yulian | Feng Shutang | Li Kui
Volume: 8
Issue: 1
Year: 2007
Distinctive expression patterns of 185/333 genes in the purple sea urchin, Strongylocentrotus purpuratus: an unexpectedly diverse family of transcripts in response to LPS, β-1,3-glucan, and dsRNA

Author(s): Terwilliger David | Buckley Katherine | Brockton Virginia | Ritter Nicole | Smith L Courtney
Volume: 8
Issue: 1
Year: 2007
Evaluation of the OPTC gene in primary open angle glaucoma: functional significance of a silent change

Author(s): Acharya Moulinath | Mookherjee Suddhasil | Bhattacharjee Ashima | Thakur Sanjay | Bandyopadhyay Arun | Sen Abhijit | Chakrabarti Subhabrata | Ray Kunal
Volume: 8
Issue: 1
Year: 2007
Interleukin-4 inhibition of interleukin-1-induced expression of matrix metalloproteinase-3 (MMP-3) is independent of lipoxygenase and PPARγ activation in human gingival fibroblasts

Author(s): Stewart Denise | Javadi Masoud | Chambers Mariah | Gunsolly Chad | Gorski Grzegorz | Borghaei Ruth
Volume: 8
Issue: 1
Year: 2007
Ets-2 and C/EBP-beta are important mediators of ovine trophoblast Kunitz domain protein-1 gene expression in trophoblast

Author(s): Chakrabarty Anindita | Roberts Michael
Volume: 8
Issue: 1
Year: 2007
Bluetongue virus RNA binding protein NS2 is a modulator of viral replication and assembly

Author(s): Kar Alak | Bhattacharya Bishnupriya | Roy Polly
Volume: 8
Issue: 1
Year: 2007
An improved genetic system for detection and analysis of protein nuclear import signals

Author(s): Marshall Kris | Zhang Zhiying | Curran Jennifer | Derbyshire Stephanie | Mymryk Joe
Volume: 8
Issue: 1
Year: 2007
Two non-homologous brain diseases-related genes, SERPINI1 and PDCD10, are tightly linked by an asymmetric bidirectional promoter in an evolutionarily conserved manner

Author(s): Chen Ping-Yen | Chang Wun-Shaing | Chou Ruey-Hwang | Lai Yiu-Kay | Lin Sheng-Chieh | Chi Chia-Yi | Wu Cheng-Wen
Volume: 8
Issue: 1
Year: 2007
Characterization of an Oct1 orthologue in the channel catfish, Ictalurus punctatus: A negative regulator of immunoglobulin gene transcription?

Author(s): Lennard Mara | Hikima Jun-ichi | Ross David | Kruiswijk Corine | Wilson Melanie | Miller Norman | Warr Gregory
Volume: 8
Issue: 1
Year: 2007
Antisense oligonucleotide-induced alternative splicing of the APOB mRNA generates a novel isoform of APOB

Author(s): Khoo Bernard | Roca Xavier | Chew Shern | Krainer Adrian
Volume: 8
Issue: 1
Year: 2007
ABCA1, ABCG1 and SR-BI: hormonal regulation in primary rat hepatocytes and human cell lines

Author(s): Sporstøl Marita | Mousavi Seyed | Eskild Winnie | Roos Norbert | Berg Trond
Volume: 8
Issue: 1
Year: 2007
Chicken ovalbumin upstream promoter transcription factor II regulates uncoupling protein 3 gene transcription in Phodopus sungorus

Author(s): Fromme Tobias | Reichwald Kathrin | Platzer Matthias | Li Xing-Sheng | Klingenspor Martin
Volume: 8
Issue: 1
Year: 2007
Modification of the mycobacteriophage Ms6 attP core allows the integration of multiple vectors into different tRNAala T-loops in slow- and fast-growing mycobacteria

Author(s): Vultos Tiago | Méderlé Isabelle | Abadie Valérie | Pimentel Madalena | Moniz-Pereira José | Gicquel Brigitte | Reyrat Jean-Marc | Winter Nathalie
Volume: 7
Issue: 1
Year: 2006
Interleukin-4 induction of the CC chemokine TARC (CCL17) in murine macrophages is mediated by multiple STAT6 sites in the TARC gene promoter

Author(s): Liddiard Kate | Welch John | Lozach Jean | Heinz Sven | Glass Christopher | Greaves David
Volume: 7
Issue: 1
Year: 2006
Characterizing exons 11 and 1 promoters of the mu opioid receptor (Oprm) gene in transgenic mice

Author(s): Xu Jin | Xu Mingming | Pan Ying-Xian
Volume: 7
Issue: 1
Year: 2006
Studies on the CPA cysteine peptidase in the Leishmania infantum genome strain JPCM5

Author(s): Denise Hubert | Poot Jacqueline | Jiménez Maribel | Ambit Audrey | Herrmann Daland | Vermeulen Arno | Coombs Graham | Mottram Jeremy
Volume: 7
Issue: 1
Year: 2006
Rtt107/Esc4 binds silent chromatin and DNA repair proteins using different BRCT motifs

Author(s): Zappulla David | Maharaj Arindel | Connelly Jessica | Jockusch Rebecca | Sternglanz Rolf
Volume: 7
Issue: 1
Year: 2006
Rhythmic expression of the cycle gene in a hematophagous insect vector

Author(s): Meireles-Filho Antonio | Amoretty Paulo | Souza Nataly | Kyriacou Charalambos | Peixoto Alexandre
Volume: 7
Issue: 1
Year: 2006
Specific use of start codons and cellular localization of splice variants of human phosphodiesterase 9A gene

Author(s): Rentero Carles | Puigdomènech Pere
Volume: 7
Issue: 1
Year: 2006
Expression and loss of alleles in cultured mouse embryonic fibroblasts and stem cells carrying allelic fluorescent protein genes

Author(s): Larson Jon | Yin Moying | Fischer Jared | Stringer Saundra | Stringer James
Volume: 7
Issue: 1
Year: 2006
TLK1B promotes repair of UV-damaged DNA through chromatin remodeling by Asf1

Author(s): Sen Siddhartha | De Benedetti Arrigo
Volume: 7
Issue: 1
Year: 2006
Selection of reference genes for quantitative RT-PCR studies in striped dolphin (Stenella coeruleoalba) skin biopsies

Author(s): Spinsanti Giacomo | Panti Cristina | Lazzeri Elisa | Marsili Letizia | Casini Silvia | Frati Francesco | Fossi Cristina
Volume: 7
Issue: 1
Year: 2006
Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR

Author(s): Silver Nicholas | Best Steve | Jiang Jie | Thein Swee
Volume: 7
Issue: 1
Year: 2006
N-terminal region of Saccharomyces cerevisiae eRF3 is essential for the functioning of the eRF1/eRF3 complex beyond translation termination

Author(s): Urakov Valery | Valouev Igor | Kochneva-Pervukhova Natalia | Packeiser Anna | Vishnevsky Alexander | Glebov Oleg | Smirnov Vladimir | Ter-Avanesyan Michael
Volume: 7
Issue: 1
Year: 2006
Differences in polyadenylation site choice between somatic and male germ cells

Author(s): McMahon K Wyatt | Hirsch Benjamin | MacDonald Clinton
Volume: 7
Issue: 1
Year: 2006
Development and evaluation of different normalization strategies for gene expression studies in Candida albicans biofilms by real-time PCR

Author(s): Nailis Heleen | Coenye Tom | Van Nieuwerburgh Filip | Deforce Dieter | Nelis Hans
Volume: 7
Issue: 1
Year: 2006
AtMND1 is required for homologous pairing during meiosis in Arabidopsis

Author(s): Panoli Aneesh | Ravi Maruthachalam | Sebastian Jose | Nishal Bindu | Reddy Thamalampudi | Marimuthu Mohan | Subbiah Veeraputhiran | Vijaybhaskar Virupapuram | Siddiqi Imran
Volume: 7
Issue: 1
Year: 2006
The yfhQ gene of Escherichia coli encodes a tRNA:Cm32/Um32 methyltransferase

Author(s): Purta Elzbieta | van Vliet Françoise | Tkaczuk Karolina | Dunin-Horkawicz Stanislaw | Mori Hirotada | Droogmans Louis | Bujnicki Janusz
Volume: 7
Issue: 1
Year: 2006
Hypoxia induces telomerase reverse transcriptase (TERT) gene expression in non-tumor fish tissues in vivo: the marine medaka (Oryzias melastigma) model

Author(s): Yu Richard | Chen Eric | Kong Richard | Ng Patrick | Mok Helen | Au Doris
Volume: 7
Issue: 1
Year: 2006
Cooperation between MEF2 and PPARγ in human intestinal β,β-carotene 15,15'-monooxygenase gene expression

Author(s): Gong Xiaoming | Tsai Shu-Whei | Yan Bingfang | Rubin Lewis
Volume: 7
Issue: 1
Year: 2006
Bacillus subtilis SbcC protein plays an important role in DNA inter-strand cross-link repair

Author(s): Mascarenhas Judita | Sanchez Humberto | Tadesse Serkalem | Kidane Dawit | Krisnamurthy Mahalakshmi | Alonso Juan | Graumann Peter
Volume: 7
Issue: 1
Year: 2006
Serum repressing efflux pump CDR1 in Candida albicans

Author(s): Yang Yun-Liang | Lin Yi-Hsuan | Tsao Ming-Yang | Chen Chia-Geun | Shih Hsin-I | Fan Jen-Chung | Wang Jang-Shiun | Lo Hsiu-Jung
Volume: 7
Issue: 1
Year: 2006
Locked nucleoside analogues expand the potential of DNAzymes to cleave structured RNA targets

Author(s): Vester Birte | Hansen Lykke | Bo Lundberg Lars | Babu B Ravindra | Sørensen Mads | Wengel Jesper | Douthwaite Stephen
Volume: 7
Issue: 1
Year: 2006
No direct effect of the -521 C/T polymorphism in the human dopamine D4 receptor gene promoter on transcriptional activity

Author(s): Kereszturi Eva | Kiraly Orsolya | Barta Csaba | Molnar Noemi | Sasvari-Szekely Maria | Csapo Zsolt
Volume: 7
Issue: 1
Year: 2006
Role of transcription factor Sp1 and CpG methylation on the regulation of the human podocalyxin gene promoter

Author(s): Butta Nora | Larrucea Susana | Alonso Sonia | Rodriguez Ramón | Arias-Salgado Elena | Ayuso Matilde | González-Manchón Consuelo | Parrilla Roberto
Volume: 7
Issue: 1
Year: 2006
Flexible promoter architecture requirements for coactivator recruitment

Author(s): Chiang Derek | Nix David | Shultzaberger Ryan | Gasch Audrey | Eisen Michael
Volume: 7
Issue: 1
Year: 2006
Alternative promoter usage of the membrane glycoprotein CD36

Author(s): Andersen Malin | Lenhard Boris | Whatling Carl | Eriksson Per | Odeberg Jacob
Volume: 7
Issue: 1
Year: 2006
Functional characterisation of the regulation of CAAT enhancer binding protein alpha by GSK-3 phosphorylation of Threonines 222/226

Author(s): Liu H-K | Perrier S | Lipina C | Finlay D | McLauchlan H | Hastie CJ | Hundal HS | Sutherland C
Volume: 7
Issue: 1
Year: 2006
Sp1/3 and NF-1 mediate basal transcription of the human P2X1 gene in megakaryoblastic MEG-01 cells

Author(s): Zhao Jiangqin | Ennion Steven
Volume: 7
Issue: 1
Year: 2006
Alternative first exon splicing regulates subcellular distribution of methionine sulfoxide reductases

Author(s): Kim Hwa-Young | Gladyshev Vadim
Volume: 7
Issue: 1
Year: 2006
A potential role of alternative splicing in the regulation of the transcriptional activity of human GLI2 in gonadal tissues

Author(s): Speek Mart | Njunkova Olga | Pata Illar | Valdre Eola | Kogerman Priit
Volume: 7
Issue: 1
Year: 2006
Characterization of novel elongated Parvulin isoforms that are ubiquitously expressed in human tissues and originate from alternative transcription initiation

Author(s): Mueller Jonathan | Kessler Daniel | Neumann Daniel | Stratmann Tina | Papatheodorou Panagiotis | Hartmann-Fatu Cristina | Bayer Peter
Volume: 7
Issue: 1
Year: 2006
The RIN: an RNA integrity number for assigning integrity values to RNA measurements

Author(s): Schroeder Andreas | Mueller Odilo | Stocker Susanne | Salowsky Ruediger | Leiber Michael | Gassmann Marcus | Lightfoot Samar | Menzel Wolfram | Granzow Martin | Ragg Thomas
Volume: 7
Issue: 1
Year: 2006
The Tgif2 gene contains a retained intron within the coding sequence

Author(s): Melhuish Tiffany | Wotton David
Volume: 7
Issue: 1
Year: 2006
The in vitro real-time oscillation monitoring system identifies potential entrainment factors for circadian clocks

Author(s): Nakahata Yasukazu | Akashi Makoto | Trcka Daniel | Yasuda Akio | Takumi Toru
Volume: 7
Issue: 1
Year: 2006
Competition between the DNA unwinding and strand pairing activities of the Werner and Bloom syndrome proteins

Author(s): Machwe Amrita | Lozada Enerlyn | Xiao Liren | Orren David
Volume: 7
Issue: 1
Year: 2006
Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon

Author(s): Olsvik Pål | Lie Kai | Jordal Ann-Elise | Nilsen Tom | Hordvik Ivar
Volume: 6
Issue: 1
Year: 2005
The radioresistance kinase TLK1B protects the cells by promoting repair of double strand breaks

Author(s): Sunavala-Dossabhoy Gulshan | Balakrishnan Sri | Sen Siddhartha | Nuthalapaty Sam | De Benedetti Arrigo
Volume: 6
Issue: 1
Year: 2005
Analysis of the function of E. coli 23S rRNA helix-loop 69 by mutagenesis

Author(s): Liiv Aivar | Karitkina Diana | Maiväli Ülo | Remme Jaanus
Volume: 6
Issue: 1
Year: 2005
An in vivo analysis of the localisation and interactions of human p66 DNA polymerase δ subunit

Author(s): Pohler J Richard | Otterlei Marit | Warbrick Emma
Volume: 6
Issue: 1
Year: 2005
Nuclear distribution and chromatin association of DNA polymerase α-primase is affected by TEV protease cleavage of Cdc23 (Mcm10) in fission yeast

Author(s): Yang Xiaowen | Gregan Juraj | Lindner Karola | Young Hedi | Kearsey Stephen
Volume: 6
Issue: 1
Year: 2005
Comparative 3-D Modeling of tmRNA

Author(s): Burks Jody | Zwieb Christian | Müller Florian | Wower Iwona | Wower Jacek
Volume: 6
Issue: 1
Year: 2005
Characterization of TRZ1, a yeast homolog of the human candidate prostate cancer susceptibility gene ELAC2 encoding tRNase Z

Author(s): Chen Yang | Beck Audrey | Davenport Christina | Chen Yuan | Shattuck Donna | Tavtigian Sean
Volume: 6
Issue: 1
Year: 2005
Comparing protocols for preparation of DNA-free total yeast RNA suitable for RT-PCR

Author(s): Del Aguila Eduardo | Dutra Marcio | Silva Joab | Paschoalin Vânia
Volume: 6
Issue: 1
Year: 2005
Relative transcript quantification by Quantitative PCR: Roughly right or precisely wrong?

Author(s): Skern Rasmus | Frost Petter | Nilsen Frank
Volume: 6
Issue: 1
Year: 2005
Use of adenoviral E1A protein to analyze K18 promoter deregulation in colon carcinoma cells discloses a role for CtBP1 and BRCA1

Author(s): Delouis Cécile | Prochasson Philippe | Laithier Madeleine | Brison Olivier
Volume: 6
Issue: 1
Year: 2005
Cloning and transcriptional analysis of the mouse receptor activity modifying protein-1 gene promoter

Author(s): Pondel Marc | Mould Richard
Volume: 6
Issue: 1
Year: 2005
Heterologous expression in Tritrichomonas foetus of functional Trichomonas vaginalis AP65 adhesin

Author(s): Kucknoor Ashwini | Mundodi Vasanthakrishna | Alderete JF
Volume: 6
Issue: 1
Year: 2005
Recognition and binding of mismatch repair proteins at an oncogenic hot spot

Author(s): Edelbrock Michael | He Huiling | Schroering Allen | Fernstrom Martha | Bathala Sangeetha | Williams Kandace
Volume: 6
Issue: 1
Year: 2005
A minor alternative transcript of the fumarylacetoacetate hydrolase gene produces a protein despite being likely subjected to nonsense-mediated mRNA decay

Author(s): Dreumont Natacha | Maresca Antonella | Boisclair-Lachance Jean-François | Bergeron Anne | Tanguay Robert
Volume: 6
Issue: 1
Year: 2005
Chromosomal duplications and cointegrates generated by the bacteriophage lamdba Red system in Escherichia coli K-12

Author(s): Poteete Anthony | Fenton Anita | Nadkarni Ashwini
Volume: 5
Issue: 1
Year: 2004
Mapping and mutation of the conserved DNA polymerase interaction motif (DPIM) located in the C-terminal domain of fission yeast DNA polymerase δ subunit Cdc27

Author(s): Gray Fiona | Pohler J Richard | Warbrick Emma | MacNeill Stuart
Volume: 5
Issue: 1
Year: 2004
Transcriptional oscillation of canonical clock genes in mouse peripheral tissues

Author(s): Yamamoto Takuro | Nakahata Yasukazu | Soma Haruhiko | Akashi Makoto | Mamine Takayoshi | Takumi Toru
Volume: 5
Issue: 1
Year: 2004
The Drosophila methyl-DNA binding protein MBD2/3 interacts with the NuRD complex via p55 and MI-2

Author(s): Marhold Joachim | Brehm Alexander | Kramer Katja
Volume: 5
Issue: 1
Year: 2004
Real-time PCR quantitation of glucocorticoid receptor alpha isoform

Author(s): Melo Murilo | Faria Cláudia | Melo Keli | Rebouças Nancy | Longui Carlos
Volume: 5
Issue: 1
Year: 2004
Glycogen Synthase Kinase-3 regulates IGFBP-1 gene transcription through the Thymine-rich Insulin Response Element

Author(s): Finlay David | Patel Satish | Dickson Lorna | Shpiro Natalia | Marquez Rodolfo | Rhodes Chris | Sutherland Calum
Volume: 5
Issue: 1
Year: 2004
Coactivators p300 and PCAF physically and functionally interact with the foamy viral trans-activator

Author(s): Bannert Helmut | Muranyi Walter | Ogryzko Vasily | Nakatani Yoshihiro | Flügel Rolf
Volume: 5
Issue: 1
Year: 2004
Periodicity of DNA in exons

Author(s): Eskesen Stephen | Eskesen Frank | Kinghorn Brian | Ruvinsky Anatoly
Volume: 5
Issue: 1
Year: 2004
Short-term cytotoxic effects and long-term instability of RNAi delivered using lentiviral vectors

Author(s): Fish Richard | Kruithof Egbert
Volume: 5
Issue: 1
Year: 2004
Co-transcriptional folding is encoded within RNA genes

Author(s): Meyer Irmtraud | Miklós István
Volume: 5
Issue: 1
Year: 2004
High-level gene expression in Aedes albopictus cells using a baculovirus Hr3 enhancer and IE1 transactivator

Author(s): Gray Christine | Coates Craig
Volume: 5
Issue: 1
Year: 2004
Post-translational generation of constitutively active cores from larger phosphatases in the malaria parasite, Plasmodium falciparum: implications for proteomics

Author(s): Kumar Rajinder | Musiyenko Alla | Oldenburg Anja | Adams Brian | Barik Sailen
Volume: 5
Issue: 1
Year: 2004
A Xenopus Dbf4 homolog is required for Cdc7 chromatin binding and DNA replication

Author(s): Jares Pedro | Luciani M Gloria | Blow J Julian
Volume: 5
Issue: 1
Year: 2004
The expression of HSP83 genes in Leishmania infantum is affected by temperature and by stage-differentiation and is regulated at the levels of mRNA stability and translation

Author(s): Larreta Ruth | Soto Manuel | Quijada Luis | Folgueira Cristina | Abanades Daniel | Alonso Carlos | Requena Jose
Volume: 5
Issue: 1
Year: 2004
Translation of the radioresistance kinase TLK1B is induced by γ-irradiation through activation of mTOR and phosphorylation of 4E-BP1

Author(s): Sunavala-Dossabhoy Gulshan | Fowler Marcie | De Benedetti Arrigo
Volume: 5
Issue: 1
Year: 2004
Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic E. coli

Author(s): Murphy Kenan | Campellone Kenneth
Volume: 4
Issue: 1
Year: 2003
A protein knockdown strategy to study the function of β-catenin in tumorigenesis

Author(s): Cong Feng | Zhang Jianxuan | Pao William | Zhou Pengbo | Varmus Harold
Volume: 4
Issue: 1
Year: 2003
The p53-inhibitor Pifithrin-α inhibits Firefly Luciferase activity in vivo and in vitro

Author(s): Rocha Sonia | Campbell Kirsteen | Roche Kevin | Perkins Neil
Volume: 4
Issue: 1
Year: 2003
Interactions within the mammalian DNA methyltransferase family

Author(s): Margot Jean | Ehrenhofer-Murray Ann | Leonhardt Heinrich
Volume: 4
Issue: 1
Year: 2003
Genetic heterogeneity in response to adenovirus gene therapy

Author(s): Lefesvre Pierre | Attema Joline | Lemckert Angelique | Havenga Menzo | Bekkum Dirk van
Volume: 4
Issue: 1
Year: 2003
Fragile X (CGG)n repeats induce a transcriptional repression in cis upon a linked promoter: Evidence for a chromatin mediated effect

Author(s): Chandler Simon | Kansagra Pushpa | Hirst Mark
Volume: 4
Issue: 1
Year: 2003
Mutations in the Lactococcus lactis Ll.LtrB group II intron that retain mobility in vivo

Author(s): D'Souza Lisa | Zhong Jin
Volume: 3
Issue: 1
Year: 2002
Viable nonsense mutants for the essential gene SUP45 of Saccharomyces cerevisiae

Author(s): Moskalenko Svetlana | Chabelskaya Svetlana | Inge-Vechtomov Sergei | Philippe Michel | Zhouravleva Galina
Volume: 4
Issue: 1
Year: 2003
Phage annealing proteins promote oligonucleotide-directed mutagenesis in Escherichia coli and mouse ES cells

Author(s): Zhang Youming | Muyrers Joep | Rientjes Jeanette | Stewart A Francis
Volume: 4
Issue: 1
Year: 2003
Cyclooxygenase-2 is a neuronal target gene of NF-κB

Author(s): Kaltschmidt Barbara | Linker Ralf | Deng Jinbo | Kaltschmidt Christian
Volume: 3
Issue: 1
Year: 2002
Aggregation and retention of human urokinase type plasminogen activator in the yeast endoplasmic reticulum

Author(s): Agaphonov Michael | Romanova Nina | Trushkina Polina | Smirnov Vladimir | Ter-Avanesyan Michael
Volume: 3
Issue: 1
Year: 2002
Binding of the baculovirus very late expression factor 1 (VLF-1) to different DNA structures

Author(s): Mikhailov Victor | Rohrmann George
Volume: 3
Issue: 1
Year: 2002
Retroviral vectors for establishing tetracycline-regulated gene expression in an otherwise recalcitrant cell line

Author(s): Kenny Paraic | Enver Tariq | Ashworth Alan
Volume: 3
Issue: 1
Year: 2002
A comparison of efficacy and toxicity between electroporation and adenoviral gene transfer

Author(s): Lefesvre Pierre | Attema Joline | van Bekkum Dirk
Volume: 3
Issue: 1
Year: 2002
Loss of cellular adhesion to matrix induces p53-independent expression of PTEN tumor suppressor

Author(s): Wu Ray-Chang | Blumenthal Martina | Li Xinwei | Schönthal Axel
Volume: 3
Issue: 1
Year: 2002
USF2 inhibits C/EBP-mediated transcriptional regulation of the RIIβ subunit of cAMP-dependent protein kinase

Author(s): Dahle Maria | Taskén Kjetil | Taskén Kristin
Volume: 3
Issue: 1
Year: 2002
Screening for sequence-specific RNA-BPs by comprehensive UV crosslinking

Author(s): Hartley Rebecca | Le Meuth-Metzinger Valerie | Osborne H Beverley
Volume: 3
Issue: 1
Year: 2002
Control of dinucleoside polyphosphates by the FHIT-homologous HNT2 gene, adenine biosynthesis and heat shock in Saccharomyces cerevisiae

Author(s): Rubio-Texeira Marta | Varnum James | Bieganowski Pawel | Brenner Charles
Volume: 3
Issue: 1
Year: 2002
Cdc5 influences phosphorylation of Net1 and disassembly of the RENT complex

Author(s): Shou Wenying | Azzam Ramzi | Chen Susan | Huddleston Michael | Baskerville Christopher | Charbonneau Harry | Annan Roland | Carr Steve | Deshaies Raymond
Volume: 3
Issue: 1
Year: 2002
A bovine papillomavirus-1 based vector restores the function of the low-density lipoprotein receptor in the receptor-deficient CHO-ldlA7 cell line

Author(s): Tammur Jaana | Sibul Hiljar | Ustav Ene | Ustav Mart | Metspalu Andres
Volume: 3
Issue: 1
Year: 2002
Natural antisense RNA inhibits the expression of BCMA, a tumour necrosis factor receptor homologue.

Author(s): Hatzoglou Anastassia | Deshayes Frédérique | Madry Christine | Laprée Geneviéve | Castanas Elias | Tsapis Andreas
Volume: 3
Issue: 1
Year: 2002
Molecular cloning of the rat proteinase-activated receptor 4 (PAR4)

Author(s): Hoogerwerf Willemijntje | Hellmich Helen | Micci Maria | Winston John | Zou Lei | Pasricha Pankaj
Volume: 3
Issue: 1
Year: 2002
A human RNA polymerase II subunit is encoded by a recently generated multigene family

Author(s): Grandemange Sylvie | Schaller Sophie | Yamano Shigeru | Du Manoir Stanislas | Shpakovski George | Mattei Marie-Geneviève | Kedinger Claude | Vigneron Marc
Volume: 2
Issue: 1
Year: 2001
Expression of c-myc is not critical for cell proliferation in established human leukemia lines

Author(s): Tidd David | Giles Richard | Broughton Caroline | Clark Richard
Volume: 2
Issue: 1
Year: 2001
The major transcription initiation site of the p27Kip1 gene is conserved in human and mouse and produces a long 5'-UTR

Author(s): Coleman Jennifer | Hawkinson Michelle | Miskimins Robin | Miskimins W Keith
Volume: 2
Issue: 1
Year: 2001
Transcriptional transactivation by selected short random peptides attached to lexA-GFP fusion proteins

Author(s): Abedi Majid | Caponigro Giordano | Shen Jiaxiang | Hansen Steven | Sandrock Tanya | Kamb Alexander
Volume: 2
Issue: 1
Year: 2001
Itt1p, a novel protein inhibiting translation termination in Saccharomyces cerevisiae

Author(s): Urakov Valery | Valouev Igor | Lewitin Eugeny | Paushkin Sergey | Kosorukov Vyacheslav | Kushnirov Vitaly | Smirnov Vladimir | Ter-Avanesyan Michael
Volume: 2
Issue: 1
Year: 2001
Different effects of antisense RelA p65 and NF-κB1 p50 oligonucleotides on the nuclear factor-κB mediated expression of ICAM-1 in human coronary endothelial and smooth muscle cells

Author(s): Voisard Rainer | Huber Nicola | Baur Regine | Susa Milorat | Ickrath Oliver | Both Anton | Koenig Wolfgang | Hombach Vinzenz
Volume: 2
Issue: 1
Year: 2001
Asymmetric interactions in the adenosine-binding pockets of the MS2 coat protein dimer

Author(s): Powell Amy | Peabody David
Volume: 2
Issue: 1
Year: 2001
The regulation of CD5 expression in murine T cells

Author(s): Tung James | Kunnavatana Shaun | Herzenberg Leonard | Herzenberg Leonore
Volume: 2
Issue: 1
Year: 2001
Coordinate regulation of RARgamma2, TBP, and TAFII135 by targeted proteolysis during retinoic acid-induced differentiation of F9 embryonal carcinoma cells

Author(s): Perletti Lucia | Kopf Eliezer | Carré Lucie | Davidson Irwin
Volume: 2
Issue: 1
Year: 2001
UAG readthrough in mammalian cells: Effect of upstream and downstream stop codon contexts reveal different signals

Author(s): Cassan Michel | Rousset Jean-Pierre
Volume: 2
Issue: 1
Year: 2001
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