Academic Journals Database
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Proteome Science

ISSN: 1477--5956
Publisher: BioMed Central


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Predicting DNA-binding locations and orientation on proteins using knowledge-based learning of geometric properties

Author(s): Wang Chien-Chih | Chen Chien-Yu
Volume: 9
Issue: Suppl 1
Year: 2011
A new method for alignment of LC-MALDI-TOF data

Author(s): Tang Zhiqun | Zhang Lihua | Cheema Amrita | Ressom Habtom
Volume: 9
Issue: Suppl 1
Year: 2011
Prediction of DNA-binding protein based on statistical and geometric features and support vector machines

Author(s): Zhou Weiqiang | Yan Hong
Volume: 9
Issue: Suppl 1
Year: 2011
Bayesian non-negative factor analysis for reconstructing transcription factor mediated regulatory networks

Author(s): Meng Jia | Zhang Jianqiu (Michelle) | Chen Yidong | Huang Yufei
Volume: 9
Issue: Suppl 1
Year: 2011
Fast subcellular localization by cascaded fusion of signal-based and homology-based methods

Author(s): Mak Man-Wai | Wang Wei | Kung Sun-Yuan
Volume: 9
Issue: Suppl 1
Year: 2011
Ontology integration to identify protein complex in protein interaction networks

Author(s): Xu Bo | Lin Hongfei | Yang Zhihao
Volume: 9
Issue: Suppl 1
Year: 2011
Prediction of 492 human protein kinase substrate specificities

Author(s): Safaei Javad | Maňuch Ján | Gupta Arvind | Stacho Ladislav | Pelech Steven
Volume: 9
Issue: Suppl 1
Year: 2011
Protein complex detection with semi-supervised learning in protein interaction networks

Author(s): Shi Lei | Lei Xiujuan | Zhang Aidong
Volume: 9
Issue: Suppl 1
Year: 2011
ATPsite: sequence-based prediction of ATP-binding residues

Author(s): Chen Ke | Mizianty Marcin | Kurgan Lukasz
Volume: 9
Issue: Suppl 1
Year: 2011
Peptide charge state determination of tandem mass spectra from low-resolution collision induced dissociation

Author(s): Shi Jinhong | Wu Fang-Xiang
Volume: 9
Issue: Suppl 1
Year: 2011
SProt: sphere-based protein structure similarity algorithm

Author(s): Galgonek Jakub | Hoksza David | Skopal Tomáš
Volume: 9
Issue: Suppl 1
Year: 2011
Processing methods for signal suppression of FTMS data

Author(s): Ma Xuepo | Cui Jian | Zhang Jianqiu
Volume: 9
Issue: Suppl 1
Year: 2011
An effective hybrid of hill climbing and genetic algorithm for 2D triangular protein structure prediction

Author(s): Su Shih-Chieh | Lin Cheng-Jian | Ting Chuan-Kang
Volume: 9
Issue: Suppl 1
Year: 2011
A binary matrix factorization algorithm for protein complex prediction

Author(s): Tu Shikui | Chen Runsheng | Xu Lei
Volume: 9
Issue: Suppl 1
Year: 2011
Applications of graph theory in protein structure identification

Author(s): Yan Yan | Zhang Shenggui | Wu Fang-Xiang
Volume: 9
Issue: Suppl 1
Year: 2011
Identification of protein-RNA interaction sites using the information of spatial adjacent residues

Author(s): Chen Wei | Zhang Shao-Wu | Cheng Yong-Mei | Pan Quan
Volume: 9
Issue: Suppl 1
Year: 2011
Decomposing PPI networks for complex discovery

Author(s): Liu Guimei | Yong Chern Han | Chua Hon Nian | Wong Limsoon
Volume: 9
Issue: Suppl 1
Year: 2011
NWE: Node-weighted expansion for protein complex prediction using random walk distances

Author(s): Maruyama Osamu | Chihara Ayaka
Volume: 9
Issue: Suppl 1
Year: 2011
Sequence and structural features of binding site residues in protein-protein complexes: comparison with protein-nucleic acid complexes

Author(s): Gromiha M | Saranya N | Selvaraj S | Jayaram B | Fukui Kazuhiko
Volume: 9
Issue: Suppl 1
Year: 2011
Phosphoproteins regulated by heat stress in rice leaves

Author(s): Chen Xinhai | Zhang Wenfeng | Zhang Baoqian | Zhou Jiechao | Wang Yongfei | Yang Qiaobin | Ke Yuqin | He Huaqin
Volume: 9
Issue: 1
Year: 2011
Analysis of the photosynthetic apparatus in transgenic tobacco plants with altered endogenous cytokinin content: a proteomic study

Author(s): Cortleven Anne | Noben Jean-Paul | Valcke Roland
Volume: 9
Issue: 1
Year: 2011
Comparative Proteomic Analysis of saccharopolyspora spinosa SP06081 and PR2 strains reveals the differentially expressed proteins correlated with the increase of spinosad yield

Author(s): Luo Yushuang | Ding Xuezhi | Xia Liqiu | Huang Fan | Li Wenping | Huang Shaoya | Tang Ying | Sun Yunjun
Volume: 9
Issue: 1
Year: 2011
Immunoproteomic analysis of bacterial proteins of Actinobacillus pleuropneumoniae serotype 1

Author(s): Zhang Wei | Shao Jing | Liu Guangjin | Tang Fang | Lu Yan | Zhai Zhipeng | Wang Yang | Wu Zongfu | Yao Huochun | Lu Chengping
Volume: 9
Issue: 1
Year: 2011
High-density lipoprotein proteome dynamics in human endotoxemia

Author(s): Levels Johannes | Geurts Pierre | Karlsson Helen | Marée Raphaël | Ljunggren Stefan | Fornander Louise | Wehenkel Louis | Lindahl Mats | Stroes Erik | Kuivenhoven Jan | Meijers Joost
Volume: 9
Issue: 1
Year: 2011
Discrimination of grade 2 and 3 cervical intraepithelial neoplasia by means of analysis of water soluble proteins recovered from cervical biopsies

Author(s): Uleberg Kai-Erik | Munk Ane | Brede Cato | Gudlaugsson Einar | van Diermen Bianca | Skaland Ivar | Malpica Anais | Janssen Emiel | Hjelle Anne | Baak Jan
Volume: 9
Issue: 1
Year: 2011
Multi-Segment Direct Inject nano-ESI-LTQ-FT-ICR-MS/MS For Protein Identification

Author(s): Chen Jing | Canales Lorena | Neal Rachel
Volume: 9
Issue: 1
Year: 2011
A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study

Author(s): Albaum Stefan | Hahne Hannes | Otto Andreas | Haußmann Ute | Becher Dörte | Poetsch Ansgar | Goesmann Alexander | Nattkemper Tim
Volume: 9
Issue: 1
Year: 2011
Analysis of EGFR signaling pathway in nasopharyngeal carcinoma cells by quantitative phosphoproteomics

Author(s): Ruan Lin | Li Xin-Hui | Wan Xun-Xun | Yi Hong | Li Cui | Li Mao-Yu | Zhang Peng-Fei | Zeng Gu-Qing | Qu Jia-Quan | He Qiu-Yan | Li Jian-Huang | Chen Yu | Chen Zhu-Chu | Xiao Zhi-Qiang
Volume: 9
Issue: 1
Year: 2011
Identification of a novel SEREX antigen family, ECSA, in esophageal squamous cell carcinoma

Author(s): Kagaya Akiko | Shimada Hideaki | Shiratori Tooru | Kuboshima Mari | Nakashima-Fujita Kazue | Yasuraoka Mari | Nishimori Takanori | Kurei Shunsuke | Hachiya Takahisa | Murakami Akihiro | Tamura Yutaka | Nomura Fumio | Ochiai Takenori | Matsubara Hisahiro | Takiguchi Masaki | Hiwasa Takaki
Volume: 9
Issue: 1
Year: 2011
Identification of maturation and protein synthesis related proteins from porcine oocytes during in vitro maturation

Author(s): Kim Jumi | Kim Ji-Su | Jeon Young-Joo | Kim Dong-Wook | Yang Tae-Ho | Soh Yunjo | Lee Hak | Choi Nag-Jin | Park Soo-Bong | Seo Kang | Chung Hyung | Lee Dong-Seok | Chae Jung-Il
Volume: 9
Issue: 1
Year: 2011
Clinical and Technical Phosphoproteomic Research

Author(s): López Elena | López Isabel | Ferreira Antonio | Sequí Julia
Volume: 9
Issue: 1
Year: 2011
Evaluation of formalin-fixed paraffin-embedded tissues in the proteomic analysis of parathyroid glands

Author(s): Donadio Elena | Giusti Laura | Cetani Filomena | Da Valle Ylenia | Ciregia Federica | Giannaccini Gino | Pardi Elena | Saponaro Federica | Torregrossa Liborio | Basolo Fulvio | Marcocci Claudio | Lucacchini Antonio
Volume: 9
Issue: 1
Year: 2011
Comparative proteomics analysis of proteins expressed in the I-1 and I-2 internodes of strawberry stolons

Author(s): Fang Xianping | Ma Huasheng | Lu Dezhao | Yu Hong | Lai Wenguo | Ruan Songlin
Volume: 9
Issue: 1
Year: 2011
Chronic kidney disease-related atherosclerosis - proteomic studies of blood plasma

Author(s): Luczak Magdalena | Formanowicz Dorota | Pawliczak Elzbieta | Wanic-Kossowska Maria | Wykretowicz Andrzej | Figlerowicz Marek
Volume: 9
Issue: 1
Year: 2011
Proteomic and immunoproteomic characterization of a DIVA subunit vaccine against Actinobacillus pleuropneumoniae

Author(s): Buettner Falk | Konze Sarah | Maas Alexander | Gerlach Gerald
Volume: 9
Issue: 1
Year: 2011
Evaluation of three high abundance protein depletion kits for umbilical cord serum proteomics

Author(s): Liu Bin | Qiu Fang-hua | Voss Courtney | Xu Yun | Zhao Ming-zhe | Wu Yan-xin | Nie Jing | Wang Zi-lian
Volume: 9
Issue: 1
Year: 2011
Improving Detection Accuracy of Lung Cancer Serum Proteomic Profiling via Two-Stage Training Process

Author(s): Hsu Pei-Sung | Wang Yu-Shan | Huang Su-Chen | Lin Yi-Hsien | Chang Chih-Chia | Tsang Yuk-Wah | Jiang Jiunn-Song | Kao Shang-Jyh | Uen Wu-Ching | Chi Kwan-Hwa
Volume: 9
Issue: 1
Year: 2011
Periostin identified as a potential biomarker of prostate cancer by iTRAQ-proteomics analysis of prostate biopsy

Author(s): Sun Chuanyu | Song Chao | Ma Zhicheng | Xu Ke | Zhang Yang | Jin Hong | Tong Shijun | Ding Weihong | Xia Guowei | Ding Qiang
Volume: 9
Issue: 1
Year: 2011
Deglycosylation and label-free quantitative LC-MALDI MS applied to efficient serum biomarker discovery of lung cancer

Author(s): Toyama Atsuhiko | Nakagawa Hidewaki | Matsuda Koichi | Ishikawa Nobuhisa | Kohno Nobuoki | Daigo Yataro | Sato Taka-Aki | Nakamura Yusuke | Ueda Koji
Volume: 9
Issue: 1
Year: 2011
Identification of Apo-A1 as a biomarker for early diagnosis of bladder transitional cell carcinoma

Author(s): Li Hongjie | Li Changying | Wu Huili | Zhang Ting | Wang Jin | Wang Shixin | Chang Jiwu
Volume: 9
Issue: 1
Year: 2011
A proteomic analysis of Curcuma comosa Roxb. rhizomes

Author(s): Boonmee Apaporn | Srisomsap Chantragan | Chokchaichamnankit Daranee | Karnchanatat Aphichart | Sangvanich Polkit
Volume: 9
Issue: 1
Year: 2011
Proteomic analysis of young leaves at three developmental stages in an albino tea cultivar

Author(s): Li Qin | Huang Jianan | Liu Shuoqian | Li Juan | Yang Xinhe | Liu Yisong | Liu Zhonghua
Volume: 9
Issue: 1
Year: 2011
Identification of azurocidin as a potential periodontitis biomarker by a proteomic analysis of gingival crevicular fluid

Author(s): Choi Young-Jin | Heo Sun-Hee | Lee Jae-Mok | Cho Je-Yoel
Volume: 9
Issue: 1
Year: 2011
Proteomic analysis of pregnancy-related proteins from pig uterus endometrium during pregnancy

Author(s): Chae Jung-Il | Kim Jumi | Lee Seong | Jeon Young-Joo | Kim Dong-Wook | Soh Yunjo | Seo Kang | Lee Hak | Choi Nag-Jin | Ryu Joohyun | Kang Sunghyun | Cho Seong-Keun | Lee Dong-Seok | Chung Hyung | Koo and
Volume: 9
Issue: 1
Year: 2011
Comparative analysis of the Spirulina platensis subcellular proteome in response to low- and high-temperature stresses: uncovering cross-talk of signaling components

Author(s): Kurdrid Pavinee | Senachak Jittisak | Sirijuntarut Matura | Yutthanasirikul Rayakorn | Phuengcharoen Phuttawadee | Jeamton Wattana | Roytrakul Sittiruk | Cheevadhanarak Supapon | Hongsthong Apiradee
Volume: 9
Issue: 1
Year: 2011
In vivo rescue of alveolar macrophages from SP-A knockout mice with exogenous SP-A nearly restores a wild type intracellular proteome; actin involvement

Author(s): Phelps David | Umstead Todd | Quintero Omar | Yengo Christopher | Floros Joanna
Volume: 9
Issue: 1
Year: 2011
Differential chromatin proteomics of the MMS-induced DNA damage response in yeast

Author(s): Kim Dong | Gidvani Rohan | Ingalls Brian | Duncker Bernard | McConkey Brendan
Volume: 9
Issue: 1
Year: 2011
Comparative shotgun proteomic analysis of Clostridium acetobutylicum from butanol fermentation using glucose and xylose

Author(s): Sivagnanam Kumaran | Raghavan Vijaya | Shah Manesh | Hettich Robert | Verberkmoes Nathan | Lefsrud Mark
Volume: 9
Issue: 1
Year: 2011
Optimizing Human Synovial Fluid Preparation for Two-Dimensional Gel Electrophoresis

Author(s): Chen Carl | Hsu Chih-Chin | Yeh Wen-Lin | Lin Hsiu-Chu | Hsieh Sen-Yung | Lin Shih-Cherng | Chen Tai-Tzung | Chen Max | Tang Simon
Volume: 9
Issue: 1
Year: 2011
Identification of stromal proteins overexpressed in nodular sclerosis Hodgkin lymphoma

Author(s): Kischel Philippe | Waltregny David | Greffe Yannick | Mazzucchelli Gabriel | De Pauw Edwin | de Leval Laurence | Castronovo Vincent
Volume: 9
Issue: 1
Year: 2011
Brain region specific mitophagy capacity could contribute to selective neuronal vulnerability in Parkinson's disease

Author(s): Diedrich Madeleine | Kitada Tohru | Nebrich Grit | Koppelstaetter Andrea | Shen Jie | Zabel Claus | Klose Joachim | Mao Lei
Volume: 9
Issue: 1
Year: 2011
Plasma proteome changes associated with refractory cytopenia with multilineage dysplasia

Author(s): Májek Pavel | Reicheltová Zuzana | Suttnar Jiří | Čermák Jaroslav | Dyr Jan
Volume: 9
Issue: 1
Year: 2011
A label-free quantitative shotgun proteomics analysis of rice grain development

Author(s): Lee Joohyun | Koh Hee-Jong
Volume: 9
Issue: 1
Year: 2011
Differential proteome analysis of human embryonic kidney cell line (HEK-293) following mycophenolic acid treatment

Author(s): Qasim Muhammad | Rahman Hazir | Oellerich Michael | Asif Abdul
Volume: 9
Issue: 1
Year: 2011
2D DIGE analysis of maternal plasma for potential biomarkers of Down Syndrome

Author(s): Heywood Wendy | Madgett Tracey | Wang Darrell | Wallington Amanda | Hogg Julie | Mills Kevin | Avent Neil
Volume: 9
Issue: 1
Year: 2011
Proteomic analysis of mare follicular fluid during late follicle development

Author(s): Fahiminiya Somayyeh | Labas Valérie | Roche Stéphane | Dacheux Jean-Louis | Gérard Nadine
Volume: 9
Issue: 1
Year: 2011
Analysis of the biofilm proteome of Xylella fastidiosa

Author(s): Silva Mariana | De Souza Alessandra | Takita Marco | Labate Carlos | Machado Marcos
Volume: 9
Issue: 1
Year: 2011
Combination of hydrogel nanoparticles and proteomics to reveal secreted proteins associated with decidualization of human uterine stromal cells

Author(s): Paule Sarah | Meehan Katie | Rainczuk Adam | Stephens Andrew | Nie Guiying
Volume: 9
Issue: 1
Year: 2011
Improved protein arrays for quantitative systems analysis of the dynamics of signaling pathway interactions

Author(s): Wang Xiaoyu | Dong Ying | Jiwani Ameena | Zou Yonglong | Pastor Johanne | Kuro-o Makoto | Habib Amyn | Ruan Minzi | Boothman David | Yang Chin-Rang
Volume: 9
Issue: 1
Year: 2011
Enriched sera protein profiling for detection of non-small cell lung cancer biomarkers

Author(s): Monari Emanuela | Casali Christian | Cuoghi Aurora | Nesci Jessica | Bellei Elisa | Bergamini Stefania | Fantoni Luca | Natali Pamela | Morandi Uliano | Tomasi Aldo
Volume: 9
Issue: 1
Year: 2011
Differential expression of proteins and phosphoproteins during larval metamorphosis of the polychaete Capitella sp. I

Author(s): Chandramouli Kondethimmanahalli | Soo Lisa | Qian Pei-Yuan
Volume: 9
Issue: 1
Year: 2011
Proteomics study of changes in soybean lines resistant and sensitive to Phytophthora sojae

Author(s): Zhang YuMei | Zhao JinMing | Xiang Yang | Bian XiaoChun | Zuo QiaoMei | Shen Qi | Gai JunYi | Xing Han
Volume: 9
Issue: 1
Year: 2011
Impact of clostridial glucosylating toxins on the proteome of colonic cells determined by isotope-coded protein labeling and LC-MALDI

Author(s): Jochim Nelli | Gerhard Ralf | Just Ingo | Pich Andreas
Volume: 9
Issue: 1
Year: 2011
Resveratrol suppresses human colon cancer cell proliferation and induces apoptosis via targeting the pentose phosphate and the talin-FAK signaling pathways-A proteomic approach

Author(s): Vanamala Jairam | Radhakrishnan Sridhar | Reddivari Lavanya | Bhat Vadiraja | Ptitsyn Andrey
Volume: 9
Issue: 1
Year: 2011
Comparison of human glomerulus proteomic profiles obtained from low quantities of samples by different mass spectrometry with the comprehensive database

Author(s): Zhang Ying | Yoshida Yutaka | Xu Bo | Magdeldin Sameh | Fujinaka Hidehiko | Liu Zan | Miyamoto Masahito | Yaoita Eishin | Yamamoto Tadashi
Volume: 9
Issue: 1
Year: 2011
Profiling of serum and tissue high abundance acute-phase proteins of patients with epithelial and germ line ovarian carcinoma

Author(s): Chen Yeng | Lim Boon-Kiong | Peh Suat-Cheng | Abdul-Rahman Puteri | Hashim Onn
Volume: 6
Issue: 1
Year: 2008
Deciphering animal development through proteomics: requirements and prospects

Author(s): Reintsch Wolfgang | Mandato Craig
Volume: 6
Issue: 1
Year: 2008
Protein profiling of the dimorphic, pathogenic fungus, Penicillium marneffei

Author(s): Chandler Julie | Treece Erin | Trenary Heather | Brenneman Jessica | Flickner Tressa | Frommelt Jonathan | Oo Zaw | Patterson Megan | Rundle William | Valle Olga | Kim Thomas | Walker Gary | Cooper Chester
Volume: 6
Issue: 1
Year: 2008
Proteomic changes in rat hippocampus and adrenals following short-term sleep deprivation

Author(s): Poirrier Jean-Etienne | Guillonneau François | Renaut Jenny | Sergeant Kjell | Luxen Andre | Maquet Pierre | Leprince Pierre
Volume: 6
Issue: 1
Year: 2008
Proteomic profiling of urine for the detection of colon cancer

Author(s): Ward Douglas | Nyangoma Stephen | Joy Howard | Hamilton Emma | Wei Wenbin | Tselepis Chris | Steven Neil | Wakelam Michael | Johnson Philip | Ismail Tariq | Martin Ashley
Volume: 6
Issue: 1
Year: 2008
Comprehensive analysis of the mouse renal cortex using two-dimensional HPLC – tandem mass spectrometry

Author(s): Zhao Yingxin | Denner Larry | Haidacher Sigmund | LeJeune Wanda | Tilton Ronald
Volume: 6
Issue: 1
Year: 2008
Proteome of monocyte priming by lipopolysaccharide, including changes in interleukin-1beta and leukocyte elastase inhibitor

Author(s): Pabst Michael | Pabst Karen | Handsman David | Beranova-Giorgianni Sarka | Giorgianni Francesco
Volume: 6
Issue: 1
Year: 2008
Proteome alteration induced by hTERT transfection of human fibroblast cells

Author(s): Mazzucchelli Gabriel | Gabelica Valérie | Smargiasso Nicolas | Fléron Maximilien | Ashimwe Wilson | Rosu Frédéric | De Pauw-Gillet Marie-Claire | Riou Jean-François | De Pauw Edwin
Volume: 6
Issue: 1
Year: 2008
Detection and identification of NAP-2 as a biomarker in hepatitis B-related hepatocellular carcinoma by proteomic approach

Author(s): He Min | Qin Jian | Zhai Rihong | Wei Xiao | Wang Qi | Rong Minhua | Jiang Zhihua | Huang Yuanjiao | Zhang Zhiyong
Volume: 6
Issue: 1
Year: 2008
Peptides OFFGEL electrophoresis: a suitable pre-analytical step for complex eukaryotic samples fractionation compatible with quantitative iTRAQ labeling

Author(s): Chenau Jérôme | Michelland Sylvie | Sidibe Jonathan | Seve Michel
Volume: 6
Issue: 1
Year: 2008
Early antibody response against Mycobacterium avium subspecies paratuberculosis antigens in subclinical cattle

Author(s): Bannantine John | Bayles Darrell | Waters W Ray | Palmer Mitchell | Stabel Judith | Paustian Michael
Volume: 6
Issue: 1
Year: 2008
Automated production of recombinant human proteins as resource for proteome research

Author(s): Kohl Thorsten | Schmidt Christian | Wiemann Stefan | Poustka Annemarie | Korf Ulrike
Volume: 6
Issue: 1
Year: 2008
Proteome profiling of embryo chick retina

Author(s): Mizukami Mina | Kanamoto Takashi | Souchelnytskyi Nazariy | Kiuchi Yoshiaki
Volume: 6
Issue: 1
Year: 2008
Data mining of plasma peptide chromatograms for biomarkers of air contaminant exposures

Author(s): Karthikeyan Subramanian | Kumarathasan Premkumari | Vincent Renaud
Volume: 6
Issue: 1
Year: 2008
Age-related subproteomic analysis of mouse liver and kidney peroxisomes

Author(s): Mi Jia | Garcia-Arcos Itsaso | Alvarez Ruben | Cristobal Susana
Volume: 5
Issue: 1
Year: 2007
Proteomic profile determination of autosomal aneuploidies by mass spectrometry on amniotic fluids

Author(s): Mange Alain | Desmetz Caroline | Bellet Virginie | Molinari Nicolas | Maudelonde Thierry | Solassol Jerome
Volume: 6
Issue: 1
Year: 2008
Increase in local protein concentration by field-inversion gel electrophoresis

Author(s): Tsai Henghang | Low Teck | Freeby Steve | Paulus Aran | Ramnarayanan Kalpana | Cheng Chung-pui | Leung Hon-chiu
Volume: 5
Issue: 1
Year: 2007
Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils

Author(s): Jethwaney Deepa | Islam Md Rafiqul | Leidal Kevin | de Bernabe Daniel | Campbell Kevin | Nauseef William | Gibson Bradford
Volume: 5
Issue: 1
Year: 2007
Quantifying raft proteins in neonatal mouse brain by 'tube-gel' protein digestion label-free shotgun proteomics

Author(s): Yu Hongwei | Wakim Bassam | Li Man | Halligan Brian | Tint G Stephen | Patel Shailendra
Volume: 5
Issue: 1
Year: 2007
Proteomic analyses of retina of excitatory amino acid carrier 1 deficient mice

Author(s): Okumichi Hideaki | Kanamoto Takashi | Souchelnytskyi Nazariy | Tanimoto Seiji | Tanaka Kohichi | Kiuchi Yoshiaki
Volume: 5
Issue: 1
Year: 2007
Bacillus anthracis secretome time course under host-simulated conditions and identification of immunogenic proteins

Author(s): Walz Alexander | Mujer Cesar | Connolly Joseph | Alefantis Tim | Chafin Ryan | Dake Clarissa | Whittington Jessica | Kumar Srikanta | Khan Akbar | DelVecchio Vito
Volume: 5
Issue: 1
Year: 2007
Laboratory methods to improve SELDI peak detection and quantitation

Author(s): Rollin Dominique | Whistler Toni | Vernon Suzanne
Volume: 5
Issue: 1
Year: 2007
PrestOMIC, an open source application for dissemination of proteomic datasets by individual laboratories

Author(s): Howes Charles | Foster Leonard
Volume: 5
Issue: 1
Year: 2007
SELDI-TOF-MS ProteinChip array profiling of T-cell clones propagated in long-term culture identifies human profilin-1 as a potential bio-marker of immunosenescence

Author(s): Mazzatti Dawn | Pawelec Graham | Longdin Robin | Powell Jonathan | Forsey Rosalyn
Volume: 5
Issue: 1
Year: 2007
Proteome characterization of a human urothelial cell line resistant to the bladder carcinogen 4-aminobiphenyl

Author(s): Pastorelli Roberta | Saletta Federica | Carpi Donatella | Campagna Roberta | dell'Osta Carlo | Schiarea Silvia | Vineis Paolo | Airoldi Luisa | Matullo Giuseppe
Volume: 5
Issue: 1
Year: 2007
Methods for peptide identification by spectral comparison

Author(s): Liu Jian | Bell Alexander | Bergeron John | Yanofsky Corey | Carrillo Brian | Beaudrie Christian | Kearney Robert
Volume: 5
Issue: 1
Year: 2007
Proteomics profiling of urine with surface enhanced laser desorption/ionization time of flight mass spectrometry

Author(s): Roelofsen Han | Alvarez-Llamas Gloria | Schepers Marianne | Landman Karloes | Vonk Roel
Volume: 5
Issue: 1
Year: 2007
Proteomic analysis of tyrosine phosphorylation during human liver transplantation

Author(s): Emadali Anouk | Metrakos Peter | Kalantari Fariba | Boutros Tarek | Boismenu Daniel | Chevet Eric
Volume: 5
Issue: 1
Year: 2007
The use of proteomics in identifying differentially expressed serum proteins in humans with type 2 diabetes

Author(s): Sundsten Tea | Eberhardson Michael | Göransson Michael | Bergsten Peter
Volume: 4
Issue: 1
Year: 2006
Signal stability of Cy3 and Cy5 on antibody microarrays

Author(s): Gu Qiang | Sivanandam Thamil Mani | Kim Caroline
Volume: 4
Issue: 1
Year: 2006
Data processing and classification analysis of proteomic changes: a case study of oil pollution in the mussel, Mytilus edulis

Author(s): Monsinjon Tiphaine | Andersen Odd | Leboulenger François | Knigge Thomas
Volume: 4
Issue: 1
Year: 2006
Proteome-level display by 2-dimensional chromatography of extracellular matrix-dependent modulation of the phenotype of bladder cancer cells

Author(s): Hurst Robert | Kyker Kimberly | Dozmorov Mikhail | Takemori Nobuaki | Singh Anil | Matsumoto Hiroyuki | Saban Ricardo | Betgovargez Edna | Simonian Michael
Volume: 4
Issue: 1
Year: 2006
High-throughput screening of cellulase F mutants from multiplexed plasmid sets using an automated plate assay on a functional proteomic robotic workcell

Author(s): Hughes Stephen | Riedmuller Steven | Mertens Jeffrey | Li Xin-Liang | Bischoff Kenneth | Qureshi Nasib | Cotta Michael | Farrelly Philip
Volume: 4
Issue: 1
Year: 2006
Competition between bound and free peptides in an ELISA-based procedure that assays peptides derived from protein digests

Author(s): Braitbard Ori | Glickstein Hava | Bishara-Shieban Janette | Pace Umberto | Stein Wilfred
Volume: 4
Issue: 1
Year: 2006
Ontogenetic variations in the venom proteome of the Amazonian snake Bothrops atrox

Author(s): Guércio Rafael | Shevchenko Anna | Shevchenko Andrej | López-Lozano Jorge | Paba Jaime | Sousa Marcelo | Ricart Carlos
Volume: 4
Issue: 1
Year: 2006
A systems approach to clinical oncology: Focus on breast cancer

Author(s): Abramovitz Mark | Leyland-Jones Brian
Volume: 4
Issue: 1
Year: 2006
Proteomic identification of Drosophila melanogaster male accessory gland proteins, including a pro-cathepsin and a soluble γ-glutamyl transpeptidase

Author(s): Walker Michael | Rylett Caroline | Keen Jeff | Audsley Neil | Sajid Mohammed | Shirras Alan | Isaac R Elwyn
Volume: 4
Issue: 1
Year: 2006
Optimising the Use of TRIzol-extracted Proteins in Surface Enhanced Laser Desorption/ Ionization (SELDI) Analysis

Author(s): Man Tsz-Kwong | Li Yiting | Dang Tu | Shen Jianhe | Perlaky Laszlo | Lau Ching
Volume: 4
Issue: 1
Year: 2006
Application of protein lysate microarrays to molecular marker verification and quantification

Author(s): Ramaswamy Anitha | Lin E | Chen Iou | Mitra Rahul | Morrisett Joel | Coombes Kevin | Ju Zhenlin | Kapoor Mini
Volume: 3
Issue: 1
Year: 2005
Molecular weight assessment of proteins in total proteome profiles using 1D-PAGE and LC/MS/MS

Author(s): Ahmad Q Rushdy | Nguyen Dat | Wingerd Mark | Church George | Steffen Martin
Volume: 3
Issue: 1
Year: 2005
Proteome analysis of a recombinant Bacillus megaterium strain during heterologous production of a glucosyltransferase

Author(s): Wang Wei | Hollmann Rajan | Fürch Tobias | Nimtz Manfred | Malten Marco | Jahn Dieter | Deckwer Wolf-Dieter
Volume: 3
Issue: 1
Year: 2005
Target selection of soluble protein complexes for structural proteomics studies

Author(s): Shen Weiping | Yun Steven | Tam Bonny | Dalal Kush | Pio Frederic
Volume: 3
Issue: 1
Year: 2005
Mass spectrometrical analysis of recombinant human growth hormone (Genotropin®) reveals amino acid substitutions in 2% of the expressed protein

Author(s): Hepner Felix | Cszasar Edina | Roitinger Elisabeth | Lubec Gert
Volume: 3
Issue: 1
Year: 2005
Expressional patterns of chaperones in ten human tumor cell lines

Author(s): Myung Jae-Kyung | Afjehi-Sadat Leila | Felizardo-Cabatic Maureen | Slavc Irene | Lubec Gert
Volume: 2
Issue: 1
Year: 2004
Validation of a prefractionation method followed by two-dimensional electrophoresis – Applied to cerebrospinal fluid proteins from frontotemporal dementia patients

Author(s): Hansson Sara | Puchades Maja | Blennow Kaj | Sjögren Magnus | Davidsson Pia
Volume: 2
Issue: 1
Year: 2004
Characterization of the microheterogeneity of transthyretin in plasma and urine using SELDI-TOF-MS immunoassay

Author(s): Schweigert Florian | Wirth Kerstin | Raila Jens
Volume: 2
Issue: 1
Year: 2004
Optimisation of the two-dimensional gel electrophoresis protocol using the Taguchi approach

Author(s): Khoudoli Guennadi | Porter Iain | Blow J Julian | Swedlow Jason
Volume: 2
Issue: 1
Year: 2004
A data management system for structural genomics

Author(s): Raymond Stéphane | O'Toole Nicholas | Cygler Miroslaw
Volume: 2
Issue: 1
Year: 2004
Altered expression of hypothetical proteins in hippocampus of transgenic mice overexpressing human Cu/Zn-superoxide dismutase 1

Author(s): Shin Joo-Ho | Yang Jae-Won | Le Pecheur Marie | London Jacqueline | Hoeger Harald | Lubec Gert
Volume: 2
Issue: 1
Year: 2004
From sequence to structure and back again: approaches for predicting protein-DNA binding

Author(s): Höglund Annette | Kohlbacher Oliver
Volume: 2
Issue: 1
Year: 2004
Evidence for existence of thirty hypothetical proteins in rat brain

Author(s): Shin Joo-Ho | Yang Jae-Won | Juranville Jean-François | Fountoulakis Michael | Lubec Gert
Volume: 2
Issue: 1
Year: 2004
The proteome of human brain microdialysate

Author(s): Maurer Martin | Berger Christian | Wolf Margit | Fütterer Carsten | Feldmann Robert | Schwab Stefan | Kuschinsky Wolfgang
Volume: 1
Issue: 1
Year: 2003
Protein identification from two-dimensional gel electrophoresis analysis of Klebsiella pneumoniae by combined use of mass spectrometry data and raw genome sequences

Author(s): Wang Wei | Sun Jibin | Nimtz Manfred | Deckwer Wolf-Dieter | Zeng An-Ping
Volume: 1
Issue: 1
Year: 2003
In silico proteome analysis to facilitate proteomics experiments using mass spectrometry

Author(s): Cagney Gerard | Amiri Shiva | Premawaradena Thanuja | Lindo Micheal | Emili Andrew
Volume: 1
Issue: 1
Year: 2003
The proteome of neural stem cells from adult rat hippocampus

Author(s): Maurer Martin | Feldmann Robert | Fütterer Carsten | Kuschinsky Wolfgang
Volume: 1
Issue: 1
Year: 2003
Deciphering the complexities of the wheat flour proteome using quantitative two-dimensional electrophoresis, three proteases and tandem mass spectrometry

Author(s): Dupont Frances | Vensel William | Tanaka Charlene | Hurkman William | Altenbach Susan
Volume: 9
Issue: 1
Year: 2011
Proteomic analysis of chicken embryonic trachea and kidney tissues after infection in ovo by avian infectious bronchitis coronavirus

Author(s): Cao Zhongzan | Han Zongxi | Shao Yuhao | Geng Heyuan | Kong Xiangang | Liu Shengwang
Volume: 9
Issue: 1
Year: 2011
Characterization of proteome alterations in Phanerochaete chrysosporium in response to lead exposure

Author(s): Yıldırım Volkan | Özcan Servet | Becher Dörte | Büttner Knut | Hecker Michael | Özcengiz Gülay
Volume: 9
Issue: 1
Year: 2011
Urinary protein profiling in hyperactive delirium and non-delirium cardiac surgery ICU patients

Author(s): van den Boogaard Mark | van Swelm Rachel | Russel Frans | Heemskerk Suzanne | van der Hoeven Johannes | Masereeuw Rosalinde | Pickkers Peter
Volume: 9
Issue: 1
Year: 2011
Identification of low-abundance proteins via fractionation of the urine proteome with weak anion exchange chromatography

Author(s): Lu Chih-Ming | Wu Yu-Jen | Chen Cheng-Chi | Hsu Jue-Liang | Chen Jiing-Chuan | Chen Jeff | Huang Chun-Hsiung | Ko Ying-Chin
Volume: 9
Issue: 1
Year: 2011
Targeted quantitative mass spectrometric immunoassay for human protein variants

Author(s): Trenchevska Olgica | Nedelkov Dobrin
Volume: 9
Issue: 1
Year: 2011
Systems analysis of endothelial cell plasma membrane proteome of rat lung microvasculature

Author(s): Li Yan | Massey Kerri | Witkiewicz Halina | Schnitzer Jan
Volume: 9
Issue: 1
Year: 2011
Differential analysis of glioblastoma multiforme proteome by a 2D-DIGE approach

Author(s): Collet Brigitte | Guitton Nathalie | Saïkali Stephan | Avril Tony | Pineau Charles | Hamlat Abderrahmane | Mosser Jean | Quillien Véronique
Volume: 9
Issue: 1
Year: 2011
A large-scale electrophoresis- and chromatography-based determination of gene expression profiles in bovine brain capillary endothelial cells after the re-induction of blood-brain barrier properties

Author(s): Pottiez Gwënaël | Deracinois Barbara | Duban-Deweer Sophie | Cecchelli Roméo | Fenart Laurence | Karamanos Yannis | Flahaut Christophe
Volume: 8
Issue: 1
Year: 2010
Proteome of the phytopathogen Xanthomonas citri subsp. citri: a global expression profile

Author(s): Soares Márcia | Facincani Agda | Ferreira Rafael | Moreira Leandro | de Oliveira Julio | Ferro Jesus | Ferro Maria | Meneghini Rogério | Gozzo Fábio
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of streptomycin resistant and sensitive clinical isolates of Mycobacterium tuberculosis

Author(s): Sharma Prashant | Kumar Bhavnesh | Gupta Yash | Singhal Neelja | Katoch Vishwa | Venkatesan Krishnamurthy | Bisht Deepa
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of small acid soluble proteins in the spore core of Bacillus subtilis ΔprpE and 168 strains with predictions of peptides liquid chromatography retention times as an additional tool in protein identification

Author(s): Macur Katarzyna | Temporini Caterina | Massolini Gabriella | Grzenkowicz-Wydra Jolanta | Obuchowski Michał | Bączek Tomasz
Volume: 8
Issue: 1
Year: 2010
A comparison of imputation procedures and statistical tests for the analysis of two-dimensional electrophoresis data

Author(s): Miecznikowski Jeffrey | Damodaran Senthilkumar | Sellers Kimberly | Rabin Richard
Volume: 8
Issue: 1
Year: 2010
Use of cervicovaginal fluid for the identification of biomarkers for pathologies of the female genital tract

Author(s): Zegels Geert | Van Raemdonck Geert | Tjalma Wiebren | Van Ostade Xaveer
Volume: 8
Issue: 1
Year: 2010
A label-free differential quantitative mass spectrometry method for the characterization and identification of protein changes during citrus fruit development

Author(s): Katz Ehud | Fon Mario | Eigenheer Richard | Phinney Brett | Fass Joseph | Lin Dawei | Sadka Avi | Blumwald Eduardo
Volume: 8
Issue: 1
Year: 2010
RNAi-based validation of antibodies for reverse phase protein arrays

Author(s): Mannsperger Heiko | Uhlmann Stefan | Schmidt Christian | Wiemann Stefan | Sahin Özgür | Korf Ulrike
Volume: 8
Issue: 1
Year: 2010
A proteomic analysis of C-reactive protein stimulated THP-1 monocytes

Author(s): Eisenhardt Steffen | Habersberger Jonathon | Oliva Karen | Lancaster Graeme | Ayhan Mustafa | Woollard Kevin | Bannasch Holger | Rice Greg | Peter Karlheinz
Volume: 9
Issue: 1
Year: 2011
Clinical proteomics for liver disease: a promising approach for discovery of novel biomarkers

Author(s): Uto Hirofumi | Kanmura Shuji | Takami Yoichiro | Tsubouchi Hirohito
Volume: 8
Issue: 1
Year: 2010
Cardiogenol C can induce Mouse Hair Bulge Progenitor Cells to Transdifferentiate into Cardiomyocyte-like Cells

Author(s): Yau Winifred | Tang Mei | Chen Elve | YaoYao | Wong Ivan | Lee Henry | Lee Kenneth
Volume: 9
Issue: 1
Year: 2011
Analysis of the proteome of human airway epithelial secretions

Author(s): Ali Mehboob | Lillehoj Erik | Park Yongsung | Kyo Yoshiyuki | Kim K
Volume: 9
Issue: 1
Year: 2011
Plasma peptidome profiling of acute hepatitis E patients by MALDI-TOF/TOF

Author(s): Taneja Shikha | Ahmad Imran | Sen Somdutta | Kumar Saravanan | Arora Reena | Gupta Vijay | Aggarwal Rakesh | Narayanasamy Krishnamoorthy | Reddy Vanga | Jameel Shahid
Volume: 9
Issue: 1
Year: 2011
Factors affecting the accuracy of urine-based biomarkers of BSE

Author(s): Plews Margot | Lamoureux Lise | Simon Sharon | Graham Catherine | Ruddat Viola | Czub Stefanie | Knox J
Volume: 9
Issue: 1
Year: 2011
Analysis of protein composition of rabbit aqueous humor following two different cataract surgery incision procedures using 2-DE and LC-MS/MS

Author(s): Stastna Miroslava | Behrens Ashley | McDonnell Peter | Van Eyk Jennifer
Volume: 9
Issue: 1
Year: 2011
An automated growth enclosure for metabolic labeling of Arabidopsis thaliana with 13C-carbon dioxide - an in vivo labeling system for proteomics and metabolomics research

Author(s): Chen Wen-Ping | Yang Xiao-Yuan | Harms Geoffrey | Gray William | Hegeman Adrian | Cohen Jerry
Volume: 9
Issue: 1
Year: 2011
Identification and structural analysis of C-terminally truncated collapsin response mediator protein-2 in a murine model of prion diseases

Author(s): Shinkai-Ouchi Fumiko | Yamakawa Yoshio | Hara Hideyuki | Tobiume Minoru | Nishijima Masahiro | Hanada Kentaro | Hagiwara Ken'ichi
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell

Author(s): Marie Benjamin | Marie Arul | Jackson Daniel | Dubost Lionel | Degnan Bernard | Milet Christian | Marin Frédéric
Volume: 8
Issue: 1
Year: 2010
A proteomic view of Caenorhabditis elegans caused by short-term hypoxic stress

Author(s): Li Hualing | Ren Changhong | Shi Jinping | Hang Xingyi | Zhang Feilong | Gao Yan | Wu Yonghong | Xu Langlai | Chen Changsheng | Zhang Chenggang
Volume: 8
Issue: 1
Year: 2010
Proteomic characterization of vanA-containing Enterococcus recovered from Seagulls at the Berlengas Natural Reserve, W Portugal

Author(s): Radhouani Hajer | Poeta Patrícia | Pinto Luís | Miranda Júlio | Coelho Céline | Carvalho Carlos | Rodrigues Jorge | López María | Torres Carmen | Vitorino Rui | Domingues Pedro | Igrejas Gilberto
Volume: 8
Issue: 1
Year: 2010
Influence of Moraxella sp. colonization on the kidney proteome of farmed gilthead sea breams (Sparus aurata, L.)

Author(s): Addis Maria | Cappuccinelli Roberto | Tedde Vittorio | Pagnozzi Daniela | Viale Iolanda | Meloni Mauro | Salati Fulvio | Roggio Tonina | Uzzau Sergio
Volume: 8
Issue: 1
Year: 2010
The extracellular proteome of Rhizobium etli CE3 in exponential and stationary growth phase

Author(s): Meneses Niurka | Mendoza-Hernández Guillermo | Encarnación Sergio
Volume: 8
Issue: 1
Year: 2010
Analysis of proteome response to the mobile phone radiation in two types of human primary endothelial cells

Author(s): Nylund Reetta | Kuster Niels | Leszczynski Dariusz
Volume: 8
Issue: 1
Year: 2010
Novel O-palmitolylated beta-E1 subunit of pyruvate dehydrogenase is phosphorylated during ischemia/reperfusion injury

Author(s): Folmes Clifford | Sawicki Grzegorz | Cadete Virgilio | Masson Grant | Barr Amy | Lopaschuk Gary
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix

Author(s): Mann Karlheinz | Wilt Fred | Poustka Albert
Volume: 8
Issue: 1
Year: 2010
Differences in the BAL proteome after Klebsiella pneumoniae infection in wild type and SP-A-/- mice

Author(s): Ali Mehboob | Umstead Todd | Haque Rizwanul | Mikerov Anatoly | Freeman Willard | Floros Joanna | Phelps David
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of differentially expressed proteins in Penaeus monodon hemocytes after Vibrio harveyi infection

Author(s): Somboonwiwat Kunlaya | Chaikeeratisak Vorrapon | Wang Hao-Ching | Fang Lo Chu | Tassanakajon Anchalee
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of proteins expressing in regions of rat brain by a combination of SDS-PAGE with nano-liquid chromatography-quadrupole-time of flight tandem mass spectrometry

Author(s): Katagiri Tomoki | Hatano Naoya | Aihara Masamune | Kawano Hiroo | Okamoto Mariko | Liu Ying | Izumi Tomonori | Maekawa Tsuyoshi | Nakamura Shoji | Ishihara Tokuhiro | Shirai Mutsunori | Mizukami Yoichi
Volume: 8
Issue: 1
Year: 2010
Dependency on de novo protein synthesis and proteomic changes during metamorphosis of the marine bryozoan Bugula neritina

Author(s): Wong Yue | Arellano Shawn | Zhang Huoming | Ravasi Timothy | Qian Pei-Yuan
Volume: 8
Issue: 1
Year: 2010
Quantitative proteomic analysis by iTRAQ® for the identification of candidate biomarkers in ovarian cancer serum

Author(s): Boylan Kristin | Andersen John | Anderson Lorraine | Higgins LeeAnn | Skubitz Amy
Volume: 8
Issue: 1
Year: 2010
A novel anti-virulence gene revealed by proteomic analysis in Shigella flexneri 2a

Author(s): Zhao Ge | Zhu Li | Feng Erling | Cao Xiaoyu | Shang Na | Liu Xiankai | Liao Xiang | Ying Tianyi | Wang Jie | Chen Huipeng | Wang Hengliang
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of primary duck hepatocytes infected with duck hepatitis B virus

Author(s): Zhao Yanfeng | Ben Haijing | Qu Su | Zhou Xinwen | Yan Liang | Xu Bin | Zhou Shuangcheng | Lou Qiang | Ye Rong | Zhou Tianlun | Yang Pengyuan | Qu Di
Volume: 8
Issue: 1
Year: 2010
Identification of latexin by a proteomic analysis in rat normal articular cartilage

Author(s): Pérez Elizabeth | Gallegos José | Cortés Leticia | Calderón Karla | Luna José | Cázares Febe | Velasquillo María | Kouri Juan | Hernández Fidel
Volume: 8
Issue: 1
Year: 2010
Development of high-yield autofluorescent protein microarrays using hybrid cell-free expression with combined Escherichia coli S30 and wheat germ extracts

Author(s): Zárate Xristo | Henderson David | Phillips Keenan | Lake April | Galbraith David
Volume: 8
Issue: 1
Year: 2010
Identification of proteins related to the stress response in Enterococcus faecalis V583 caused by bovine bile

Author(s): Bøhle Liv | Færgestad Ellen | Veiseth-Kent Eva | Steinmoen Hilde | Nes Ingolf | Eijsink Vincent | Mathiesen Geir
Volume: 8
Issue: 1
Year: 2010
Differential expression of proteomics models of colorectal cancer, colorectal benign disease and healthy controls

Author(s): Liu Ming | Li Chun-Feng | Chen Hong-Sheng | Lin Luo-Qiang | Zhang Chun-Peng | Zhao Jin-Lu | Liu Yan | Zhang Shu-Jun | Jin Jun-Chao | Wang Lei | Liu Jia-Ren
Volume: 8
Issue: 1
Year: 2010
Proteome analysis of human Wharton's jelly cells during in vitro expansion

Author(s): Angelucci Stefania | Marchisio Marco | Di Giuseppe Fabrizio | Pierdomenico Laura | Sulpizio Marilisa | Eleuterio Enrica | Lanuti Paola | Sabatino Giuseppe | Miscia Sebastiano | Di Ilio Carmine
Volume: 8
Issue: 1
Year: 2010
Shotgun proteomic analysis of mulberry dwarf phytoplasma

Author(s): Ji Xianling | Gai Yingping | Lu Baoyun | Zheng Chengchao | Mu Zhimei
Volume: 8
Issue: 1
Year: 2010
Identification of a novel Plasmopara halstedii elicitor protein combining de novo peptide sequencing algorithms and RACE-PCR

Author(s): Jung Stephan | Fladerer Claudia | Braendle Frank | Madlung Johannes | Spring Otmar | Nordheim Alfred
Volume: 8
Issue: 1
Year: 2010
Proteome characterization of cassava (Manihot esculenta Crantz) somatic embryos, plantlets and tuberous roots

Author(s): Li Kaimian | Zhu Wenli | Zeng Kang | Zhang Zhenwen | Ye Jianqiu | Ou Wenjun | Rehman Samrina | Heuer Bruria | Chen Songbi
Volume: 8
Issue: 1
Year: 2010
A novel method for sample preparation of fresh lung cancer tissue for proteomics analysis by tumor cell enrichment and removal of blood contaminants

Author(s): De Petris Luigi | Pernemalm Maria | Elmberger Göran | Bergman Per | Orre Lotta | Lewensohn Rolf | Lehtiö Janne
Volume: 8
Issue: 1
Year: 2010
Alterations in the red blood cell membrane proteome in alzheimer's subjects reflect disease-related changes and provide insight into altered cell morphology

Author(s): Mohanty Joy | Shukla Hem | Williamson Jefferey | Launer Lenore | Saxena Satya | Rifkind Joseph
Volume: 8
Issue: 1
Year: 2010
Proteome differences associated with fat accumulation in bovine subcutaneous adipose tissues

Author(s): Zhao Yong | Basu Urmila | Dodson Michael | Basarb John | Guan Le
Volume: 8
Issue: 1
Year: 2010
Effects of UVB-induced oxidative stress on protein expression and specific protein oxidation in normal human epithelial keratinocytes: a proteomic approach

Author(s): Perluigi Marzia | Di Domenico Fabio | Blarzino Carla | Foppoli Cesira | Cini Chiara | Giorgi Alessandra | Grillo Caterina | De Marco Federico | Butterfield David | Schininà Maria | Coccia Raffaella
Volume: 8
Issue: 1
Year: 2010
A gel-free approach in vascular smooth muscle cell proteome: perspectives for a better insight into activation

Author(s): Rocchiccioli Silvia | Citti Lorenzo | Boccardi Claudia | Ucciferri Nadia | Tedeschi Lorena | Lande Caterina | Trivella Maria | Cecchettini Antonella
Volume: 8
Issue: 1
Year: 2010
Downregulated expression of HSP27 in human low-grade glioma tissues discovered by a quantitative proteomic analysis

Author(s): Shen Guobo | Liang Shufang | Xu Zhizhong | Zhou Liangxue | Xiao Shiyin | Xia Xiangying | Li Ronghui | Liao Ying | You Chao | Wei Yuquan
Volume: 8
Issue: 1
Year: 2010
Proteome analysis of soybean leaves, hypocotyls and roots under salt stress

Author(s): Sobhanian Hamid | Razavizadeh Roya | Nanjo Yohei | Ehsanpour Ali | Jazii Ferdous | Motamed Nasrin | Komatsu Setsuko
Volume: 8
Issue: 1
Year: 2010
Changes in the proteomes of the hemocytes and fat bodies of the flesh fly Sarcophaga bullata larvae after infection by Escherichia coli

Author(s): Masova Alice | Sanda Miloslav | Jiracek Jiri | Selicharova Irena
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of regenerating mouse liver following 50% partial hepatectomy

Author(s): Cao Hongcui | Yu Jiong | Xu Wei | Jia Xiaofei | Yang Jinfeng | Pan Qiaoling | Zhang Qiyi | Sheng Guoping | Li Jun | Pan Xiaoping | Wang Yingjie | Li Lanjuan
Volume: 7
Issue: 1
Year: 2009
Effects of MMP-9 inhibition by doxycycline on proteome of lungs in high tidal volume mechanical ventilation-induced acute lung injury

Author(s): Doroszko Adrian | Hurst Thomas | Polewicz Dorota | Sawicka Jolanta | Fert-Bober Justyna | Johnson David | Sawicki Grzegorz
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of prolactinoma cells by immuno-laser capture microdissection combined with online two-dimensional nano-scale liquid chromatography/mass spectrometry

Author(s): Liu Yingchao | Wu Jinsong | Yan Guoquan | Hou Ruiping | Zhuang Dongxiao | Chen Luping | Pang Qi | Zhu Jianhong
Volume: 8
Issue: 1
Year: 2010
Plasma proteome analysis of patients with type 1 diabetes with diabetic nephropathy

Author(s): Overgaard Anne | Hansen Henning | Lajer Maria | Pedersen Lykke | Tarnow Lise | Rossing Peter | McGuire James | Pociot Flemming
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of the metabolic adaptation of the biocontrol agent Pseudozyma flocculosa leading to glycolipid production

Author(s): Hammami Walid | Chain Florian | Michaud Dominique | Bélanger Richard
Volume: 8
Issue: 1
Year: 2010
Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome

Author(s): Stellberger Thorsten | Häuser Roman | Baiker Armin | Pothineni Venkata | Haas Jürgen | Uetz Peter
Volume: 8
Issue: 1
Year: 2010
Activity-based protein profiling of the hepatitis C virus replication in Huh-7 hepatoma cells using a non-directed active site probe

Author(s): Singaravelu Ragunath | Blais David | McKay Craig | Pezacki John
Volume: 8
Issue: 1
Year: 2010
Comparative proteomic analysis of pathogenic and non-pathogenic strains from the swine pathogen Mycoplasma hyopneumoniae

Author(s): Pinto Paulo | Klein Cátia | Zaha Arnaldo | Ferreira Henrique
Volume: 7
Issue: 1
Year: 2009
Quantitative mass spectrometry of TATA binding protein-containing complexes and subunit phosphorylations during the cell cycle

Author(s): Pijnappel WWM Pim | Kolkman Annemieke | Baltissen Marijke | Heck Albert | Timmers HT Marc
Volume: 7
Issue: 1
Year: 2009
A comparison between protein profiles of B cell subpopulations and mantle cell lymphoma cells

Author(s): Stranneheim Henrik | Orre Lukas | Lehtiö Janne | Flygare Jenny
Volume: 7
Issue: 1
Year: 2009
Proteins related to lipoprotein profile were identified using a pharmaco-proteomic approach as markers for growth response to growth hormone (GH) treatment in short prepubertal children

Author(s): Andersson Björn | Hellgren Gunnel | Nierop Andreas | Hochberg Ze'ev | Albertsson-Wikland Kerstin
Volume: 7
Issue: 1
Year: 2009
Functional phosphoproteomic profiling of phosphorylation sites in membrane fractions of salt-stressed Arabidopsis thaliana

Author(s): Hsu Jue-Liang | Wang Lan-Yu | Wang Shu-Ying | Lin Ching-Huang | Ho Kuo-Chieh | Shi Fong-Ku | Chang Ing-Feng
Volume: 7
Issue: 1
Year: 2009
Enrichment and proteomic analysis of plasma membrane from rat dorsal root ganglions

Author(s): Xiong Xia | Huang Sha | Zhang Hai | Li Jianjun | Shen Jianying | Xiong Jixian | Lin Yong | Jiang Liping | Wang Xianchun | Liang Sonping
Volume: 7
Issue: 1
Year: 2009
Optimized sample preparation for two-dimensional gel electrophoresis of soluble proteins from chicken bursa of Fabricius

Author(s): Wu Yongping | Zhou Jiyong | Zhang Xin | Zheng Xiaojuan | Jiang Xuetao | Shi Lixue | Yin Wei | Wang Junhua
Volume: 7
Issue: 1
Year: 2009
Plasma and urine biomarkers in acute viral hepatitis E

Author(s): Taneja Shikha | Sen Somdutta | Gupta Vijay | Aggarwal Rakesh | Jameel Shahid
Volume: 7
Issue: 1
Year: 2009
Subcellular proteomic characterization of the high-temperature stress response of the cyanobacterium Spirulina platensis

Author(s): Hongsthong Apiradee | Sirijuntarut Matura | Yutthanasirikul Rayakorn | Senachak Jittisak | Kurdrid Pavinee | Cheevadhanarak Supapon | Tanticharoen Morakot
Volume: 7
Issue: 1
Year: 2009
Proteomic profiling of L-cysteine induced selenite resistance in Enterobacter sp. YSU

Author(s): Jasenec Ashley | Barasa Nathaniel | Kulkarni Samatha | Shaik Nabeel | Moparthi Swarnalatha | Konda Venkataramana | Caguiat Jonathan
Volume: 7
Issue: 1
Year: 2009
Large-scale analysis of protein expression changes in human keratinocytes immortalized by human papilloma virus type 16 E6 and E7 oncogenes

Author(s): Merkley Mark | Hildebrandt Ellen | Podolsky Robert | Arnouk Hilal | Ferris Daron | Dynan William | Stöppler Hubert
Volume: 7
Issue: 1
Year: 2009
Prediction of outcome of non-small cell lung cancer patients treated with chemotherapy and bortezomib by time-course MALDI-TOF-MS serum peptide profiling

Author(s): Voortman Johannes | Pham Thang | Knol Jaco | Giaccone Giuseppe | Jimenez Connie
Volume: 7
Issue: 1
Year: 2009
Proteomic analysis of total cellular proteins of human neutrophils

Author(s): Tomazella Gisele | da Silva Idalete | Laure Helen | Rosa José | Chammas Roger | Wiker Harald | de Souza Gustavo | Greene Lewis
Volume: 7
Issue: 1
Year: 2009
Proteome analysis of the Escherichia coli heat shock response under steady-state conditions

Author(s): Lüders Svenja | Fallet Claas | Franco-Lara Ezequiel
Volume: 7
Issue: 1
Year: 2009
2-DE analysis indicates that Acinetobacter baumannii displays a robust and versatile metabolism

Author(s): Soares Nelson | Cabral Maria | Parreira José | Gayoso Carmen | Barba Maria | Bou Germán
Volume: 7
Issue: 1
Year: 2009
Proteomic profiling of glucocorticoid-exposed myogenic cells: Time series assessment of protein translocation and transcription of inactive mRNAs

Author(s): Reeves Erica | Gordish-Dressman Heather | Hoffman Eric | Hathout Yetrib
Volume: 7
Issue: 1
Year: 2009
Identification of protein functions using a machine-learning approach based on sequence-derived properties

Author(s): Lee Bum | Shin Moon | Oh Young | Oh Hae | Ryu Keun
Volume: 7
Issue: 1
Year: 2009
Enhanced detection method for corneal protein identification using shotgun proteomics

Author(s): Meade Mitchell | Shiyanov Pavel | Schlager John
Volume: 7
Issue: 1
Year: 2009
Altered proteolytic events in experimental autoimmune encephalomyelitis discovered by iTRAQ shotgun proteomics analysis of spinal cord

Author(s): Jain Mohit | Bian Shengjie | Liu Tong | Hu Jun | Elkabes Stella | Li Hong
Volume: 7
Issue: 1
Year: 2009
Comparison of two label-free global quantitation methods, APEX and 2D gel electrophoresis, applied to the Shigella dysenteriae proteome

Author(s): Kuntumalla Srilatha | Braisted John | Huang Shih-Ting | Parmar Prashanth | Clark David | Alami Hamid | Zhang Quanshun | Donohue-Rolfe Arthur | Tzipori Saul | Fleischmann Robert | Peterson Scott | Pieper Rembert
Volume: 7
Issue: 1
Year: 2009
Proteomic analysis of the response of the plant growth-promoting bacterium Pseudomonas putida UW4 to nickel stress

Author(s): Cheng Zhenyu | Wei Yi-Yun | Sung Wilson | Glick Bernard | McConkey Brendan
Volume: 7
Issue: 1
Year: 2009
Classification-based comparison of pre-processing methods for interpretation of mass spectrometry generated clinical datasets

Author(s): Wegdam Wouter | Moerland Perry | Buist Marrije | van Themaat Emiel | Bleijlevens Boris | Hoefsloot Huub | de Koster Chris | Aerts Johannes
Volume: 7
Issue: 1
Year: 2009
Mitochondrial proteomics on human fibroblasts for identification of metabolic imbalance and cellular stress

Author(s): Palmfeldt Johan | Vang Søren | Stenbroen Vibeke | Pedersen Christina | Christensen Jane | Bross Peter | Gregersen Niels
Volume: 7
Issue: 1
Year: 2009
Comprehensive proteomic analysis of human cervical-vaginal fluid using colposcopy samples

Author(s): Zegels Geert | Van Raemdonck Geert | Coen Edmond | Tjalma Wiebren | Van Ostade Xaveer
Volume: 7
Issue: 1
Year: 2009
A novel approach to denoising ion trap tandem mass spectra

Author(s): Ding Jiarui | Shi Jinhong | Poirier Guy | Wu Fang-Xiang
Volume: 7
Issue: 1
Year: 2009
Proteomic study on gender differences in aging kidney of mice

Author(s): Amelina Hanna | Cristobal Susana
Volume: 7
Issue: 1
Year: 2009
Discovery and identification of potential biomarkers of pediatric Acute Lymphoblastic Leukemia

Author(s): Shi Linan | Zhang Jun | Wu Peng | Feng Kai | Li Jing | Xie Zhensheng | Xue Peng | Cai Tanxi | Cui Ziyou | Chen Xiulan | Hou Junjie | Zhang Jianzhong | Yang Fuquan
Volume: 7
Issue: 1
Year: 2009
Integral and peripheral association of proteins and protein complexes with Yersinia pestis inner and outer membranes

Author(s): Pieper Rembert | Huang Shih-Ting | Clark David | Robinson Jeffrey | Alami Hamid | Parmar Prashanth | Suh Moo-Jin | Kuntumalla Srilatha | Bunai Christine | Perry Robert | Fleischmann Robert | Peterson Scott
Volume: 7
Issue: 1
Year: 2009
Biomarkers of HIV-1 associated dementia: proteomic investigation of sera

Author(s): Wiederin Jayme | Rozek Wojciech | Duan Fenghai | Ciborowski Pawel
Volume: 7
Issue: 1
Year: 2009
Identification and bioinformatic analysis of the membrane proteins of synechocystis sp. PCC 6803

Author(s): Wang Yingchun | Xu Wu | Chitnis Parag
Volume: 7
Issue: 1
Year: 2009
The impact of surfactant protein-A on ozone-induced changes in the mouse bronchoalveolar lavage proteome

Author(s): Haque Rizwanul | Umstead Todd | Freeman Willard | Floros Joanna | Phelps David
Volume: 7
Issue: 1
Year: 2009
Two-dimensional gel proteome reference map of human small intestine

Author(s): Simula Maria | Cannizzaro Renato | Marin Maria | Pavan Alessandro | Toffoli Giuseppe | Canzonieri Vincenzo | De Re Valli
Volume: 7
Issue: 1
Year: 2009
Identification of pancreatic cancer invasion-related proteins by proteomic analysis

Author(s): Walsh Naomi | O'Donovan Norma | Kennedy Susan | Henry Michael | Meleady Paula | Clynes Martin | Dowling Paul
Volume: 7
Issue: 1
Year: 2009
Protein expression profiling during chick retinal maturation: a proteomics-based approach

Author(s): Finnegan Sorcha | Robson Joanne | Wylie Mildred | Healy Adrienne | Stitt Alan | Curry William
Volume: 6
Issue: 1
Year: 2008
High resolution preparation of monocyte-derived macrophages (MDM) protein fractions for clinical proteomics

Author(s): Polati Rita | Castagna Annalisa | Bossi Alessandra | Campostrini Natascia | Zaninotto Federica | Timperio Anna | Zolla Lello | Olivieri Oliviero | Corrocher Roberto | Girelli Domenico
Volume: 7
Issue: 1
Year: 2009
Glycoproteomic analysis of two mouse mammary cell lines during transforming growth factor (TGF)-β induced epithelial to mesenchymal transition

Author(s): Hill Jennifer | Tremblay Tammy-Lynn | Cantin Christiane | O'Connor-McCourt Maureen | Kelly John | Lenferink Anne
Volume: 7
Issue: 1
Year: 2009
GO Explorer: A gene-ontology tool to aid in the interpretation of shotgun proteomics data

Author(s): Carvalho Paulo | Fischer Juliana | Chen Emily | Domont Gilberto | Carvalho Maria | Degrave Wim | Yates John | Barbosa Valmir
Volume: 7
Issue: 1
Year: 2009
Histoplasma capsulatum proteome response to decreased iron availability

Author(s): Winters Michael | Spellman Daniel | Chan Qilin | Gomez Francisco | Hernandez Margarita | Catron Brittany | Smulian Alan | Neubert Thomas | Deepe George
Volume: 6
Issue: 1
Year: 2008
In-depth, high-accuracy proteomics of sea urchin tooth organic matrix

Author(s): Mann Karlheinz | Poustka Albert | Mann Matthias
Volume: 6
Issue: 1
Year: 2008
A proteomic approach identified growth hormone-dependent nutrition markers in children with idiopathic short stature

Author(s): Hellgren Gunnel | Andersson Björn | Nierop Andreas | Dahlgren Jovanna | Hochberg Ze'ev | Albertsson-Wikland Kerstin
Volume: 6
Issue: 1
Year: 2008
High throughput protein-protein interaction data: clues for the architecture of protein complexes

Author(s): Krycer James | Pang Chi | Wilkins Marc
Volume: 6
Issue: 1
Year: 2008
A study on the differential protein profiles in liver cells of heat stress rats with and without turpentine treatment

Author(s): Rajaseger Ganapathy | Lim Chin | Wui Lee | Saravanan Padmanabhan | Tang Kai | Gopalakrishnakone Ponnampalam | Pen-huat Yap | Lu Jia | Shabbir Moochhala
Volume: 7
Issue: 1
Year: 2009
SELDI-TOF-MS determination of hepcidin in clinical samples using stable isotope labelled hepcidin as an internal standard

Author(s): Ward Douglas | Roberts Keith | Stonelake Paul | Goon Patrick | Zampronio Cleidiane | Martin Ashley | Johnson Philip | Iqbal Tariq | Tselepis Chris
Volume: 6
Issue: 1
Year: 2008
The identification of disease-induced biomarkers in the urine of BSE infected cattle

Author(s): Simon Sharon | Lamoureux Lise | Plews Margot | Stobart Michael | LeMaistre Jillian | Ziegler Ute | Graham Catherine | Czub Stefanie | Groschup Martin | Knox J David
Volume: 6
Issue: 1
Year: 2008
Trypanosoma cruzi alkaline 2-DE: Optimization and application to comparative proteome analysis of flagellate life stages

Author(s): Magalhães Adriana | Charneau Sébastien | Paba Jaime | Guércio Rafael | Teixeira Antonio | Santana Jaime | Sousa Marcelo | Ricart Carlos
Volume: 6
Issue: 1
Year: 2008
Patients with ovarian carcinoma excrete different altered levels of urine CD59, kininogen-1 and fragments of inter-alpha-trypsin inhibitor heavy chain H4 and albumin

Author(s): Abdullah-Soheimi Siti | Lim Boon-Kiong | Hashim Onn | Shuib Adawiyah
Volume: 8
Issue: 1
Year: 2010
Proteomic profiling of proteins associated with the rejuvenation of Sequoia sempervirens (D. Don) Endl

Author(s): Chang Ing-Feng | Chen Peng-Jen | Shen Chin-Hui | Hsieh Tsung-Ju | Hsu Ya-Wen | Huang Bau-Lian | Kuo Ching-I | Chen Yu-Ting | Chu Hsiu-An | Yeh Kai-Wun | Huang Li-Chun
Volume: 8
Issue: 1
Year: 2010
Down-regulation of phosphoglucomutase 3 mediates sulforaphane-induced cell death in LNCaP prostate cancer cells

Author(s): Lee Chan-Hee | Jeong Soo-Jin | Yun Sun-Mi | Kim Ji-Hyun | Lee Hyo-Jung | Ahn Kwang | Won Suk-Hyun | Kim Hyun | Lee Hyo-Jeong | Ahn Kyoo-Seok | Zhu Shudong | Chen Chang-Yan | Kim Sung-Hoon
Volume: 8
Issue: 1
Year: 2010
Stable isotope shifted matrices enable the use of low mass ion precursor scanning for targeted metabolite identification

Author(s): Reilly Charles | Ramarathinam Sri | Williamson Nicholas | Purcell Anthony
Volume: 9
Issue: 1
Year: 2011
Highlights on the capacities of "Gel-based" proteomics

Author(s): Chevalier François
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of PBMCs: characterization of potential HIV-associated proteins

Author(s): Zhang Lijun | Jia Xiaofang | Zhang Xiaojun | Sun Jianjun | Peng Xia | Qi Tangkai | Ma Fang | Yin Lin | Yao Yamin | Qiu Chao | Lu Hongzhou
Volume: 8
Issue: 1
Year: 2010
Understanding the molecular basis of plant growth promotional effect of Pseudomonas fluorescens on rice through protein profiling

Author(s): Kandasamy Saveetha | Loganathan Karthiba | Muthuraj Raveendran | Duraisamy Saravanakumar | Seetharaman Suresh | Thiruvengadam Raguchander | Ponnusamy Balasubramanian | Ramasamy Samiyappan
Volume: 7
Issue: 1
Year: 2009
Transchromosomic cell model of Down syndrome shows aberrant migration, adhesion and proteome response to extracellular matrix

Author(s): Delom Frédéric | Burt Emma | Hoischen Alex | Veltman Joris | Groet Jürgen | Cotter Finbarr | Nizetic Dean
Volume: 7
Issue: 1
Year: 2009
Proteins altered by elevated levels of palmitate or glucose implicated in impaired glucose-stimulated insulin secretion

Author(s): Sol E-ri | Hovsepyan Meri | Bergsten Peter
Volume: 7
Issue: 1
Year: 2009
Development of reverse phase protein microarrays for the validation of clusterin, a mid-abundant blood biomarker

Author(s): Aguilar-Mahecha Adriana | Cantin Christiane | O'Connor-McCourt Maureen | Nantel Andre | Basik Mark
Volume: 7
Issue: 1
Year: 2009
Pooling serum samples may lead to loss of potential biomarkers in SELDI-ToF MS proteomic profiling

Author(s): Sadiq S Tariq | Agranoff Dan
Volume: 6
Issue: 1
Year: 2008
Label-free detection of biomolecular interactions in real time with a nano-porous silicon-based detection method

Author(s): Latterich Martin | Corbeil Jacques
Volume: 6
Issue: 1
Year: 2008
Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation

Author(s): Ernoult Emilie | Gamelin Erick | Guette Catherine
Volume: 6
Issue: 1
Year: 2008
Multidimensional protein fractionation using ProteomeLab PF 2D™ for profiling amyotrophic lateral sclerosis immunity: A preliminary report

Author(s): Schlautman Joshua | Rozek Wojciech | Stetler Robert | Mosley R Lee | Gendelman Howard | Ciborowski Pawel
Volume: 6
Issue: 1
Year: 2008
Proteomic analysis of the EhV-86 virion

Author(s): Allen Michael | Howard Julie | Lilley Kathryn | Wilson William
Volume: 6
Issue: 1
Year: 2008
Proteomic profiling of endorepellin angiostatic activity on human endothelial cells

Author(s): Zoeller Jason | Iozzo Renato
Volume: 6
Issue: 1
Year: 2008
Surface antigens and potential virulence factors from parasites detected by comparative genomics of perfect amino acid repeats

Author(s): Fankhauser Niklaus | Nguyen-Ha Tien-Minh | Adler Joël | Mäser Pascal
Volume: 5
Issue: 1
Year: 2007
SELDI-TOF mass spectrometry of High-Density Lipoprotein

Author(s): Levels Johannes | Bleijlevens Boris | Rezaee Farhad | Aerts Johannes | Meijers Joost
Volume: 5
Issue: 1
Year: 2007
Comparative proteomics reveal characteristics of life-history transitions in a social insect

Author(s): Wolschin Florian | Amdam Gro
Volume: 5
Issue: 1
Year: 2007
Identification of differentially regulated proteins in a patient with Leber's Congenital Amaurosis – a proteomic study

Author(s): Vorum Henrik | Østergaard Morten | Rice Greg | Honoré Bent | Bek Toke
Volume: 5
Issue: 1
Year: 2007
Effect of long-term exposure of SH-SY5Y cells to morphine: a whole cell proteomic analysis

Author(s): Neasta Jérémie | Uttenweiler-Joseph Sandrine | Chaoui Karima | Monsarrat Bernard | Meunier Jean-Claude | Moulédous Lionel
Volume: 4
Issue: 1
Year: 2006
Interest of major serum protein removal for Surface-Enhanced Laser Desorption/Ionization – Time Of Flight (SELDI-TOF) proteomic blood profiling

Author(s): Roche Stéphane | Tiers Laurent | Provansal Monique | Piva Marie-Thérèse | Lehmann Sylvain
Volume: 4
Issue: 1
Year: 2006
Analytical model of peptide mass cluster centres with applications

Author(s): Wolski Witold | Farrow Malcolm | Emde Anne-Katrin | Lehrach Hans | Lalowski Maciej | Reinert Knut
Volume: 4
Issue: 1
Year: 2006
Phosphoprotein analysis: from proteins to proteomes

Author(s): Delom Frédéric | Chevet Eric
Volume: 4
Issue: 1
Year: 2006
Two-dimensional gel proteome reference map of blood monocytes

Author(s): Jin Ming | Diaz Philip | Bourgeois Tran | Eng Charis | Marsh Clay | Wu Haifeng
Volume: 4
Issue: 1
Year: 2006
An ELISA-based procedure for assaying proteins in digests of human leukocytes and cell lines, using specifically selected peptides and appropriate antibodies

Author(s): Braitbard Ori | Bishara-Shieban Janette | Glickstein Hava | Kott-Gutkowski Miriam | Pace Umberto | Rund Deborah | Stein Wilfred
Volume: 4
Issue: 1
Year: 2006
Identification of differentially expressed proteins in spontaneous thymic lymphomas from knockout mice with deletion of p53

Author(s): Honoré Bent | Buus Søren | Claësson Mogens
Volume: 6
Issue: 1
Year: 2008
Development of pan-specific antibody against trimethyllysine for protein research

Author(s): Liang Ziqian | Wong Ronald | Li Lin Hong | Jiang Hesheng | Xiao Hao | Li Gang
Volume: 6
Issue: 1
Year: 2008
A method for improving SELDI-TOF mass spectrometry data quality

Author(s): Whistler Toni | Rollin Dominique | Vernon Suzanne
Volume: 5
Issue: 1
Year: 2007
An informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQTM

Author(s): Siepen Jennifer | Swainston Neil | Jones Andrew | Hart Sarah | Hermjakob Henning | Jones Philip | Hubbard Simon
Volume: 5
Issue: 1
Year: 2007
Estimating probabilities of peptide database identifications to LC-FTICR-MS observations

Author(s): Anderson Kevin | Monroe Matthew | Daly Don
Volume: 4
Issue: 1
Year: 2006
Protein cleavage strategies for an improved analysis of the membrane proteome

Author(s): Fischer Frank | Poetsch Ansgar
Volume: 4
Issue: 1
Year: 2006
Optimization and evaluation of surface-enhanced laser-desorption/ionization time-of-flight mass spectrometry for protein profiling of cerebrospinal fluid

Author(s): Guerreiro Nelson | Gomez-Mancilla Baltazar | Charmont Stéphane
Volume: 4
Issue: 1
Year: 2006
Proteins pattern alteration in AZT-treated K562 cells detected by two-dimensional gel electrophoresis and peptide mass fingerprinting

Author(s): D'Andrea Gabriele | Lizzi Anna | Venditti Sara | Di Francesco Laura | Giorgi Alessandra | Mignogna Giuseppina | Oratore Arduino | Bozzi Argante
Volume: 4
Issue: 1
Year: 2006
Cognate peptide-receptor ligand mapping by directed phage display

Author(s): Stratmann Thomas | Kang Angray
Volume: 3
Issue: 1
Year: 2005
Human neuroglobin protein in cerebrospinal fluid

Author(s): Casado Begona | Pannell Lewis | Whalen Gail | Clauw Daniel | Baraniuk James
Volume: 3
Issue: 1
Year: 2005
Development and standardization of multiplexed antibody microarrays for use in quantitative proteomics

Author(s): Perlee LT | Christiansen J | Dondero R | Grimwade B | Lejnine S | Mullenix M | Shao W | Sorette M | Tchernev VT | Patel DD | Kingsmore SF
Volume: 2
Issue: 1
Year: 2004
Protein expression profiling arrays: tools for the multiplexed high-throughput analysis of proteins

Author(s): Sydor Jens | Nock Steffen
Volume: 1
Issue: 1
Year: 2003
Enhanced detergent extraction for analysis of membrane proteomes by two-dimensional gel electrophoresis

Author(s): Churchward Matthew | Butt R Hussain | Lang John | Hsu Kimberly | Coorssen Jens
Volume: 3
Issue: 1
Year: 2005
Peptides identify multiple hotspots within the ligand binding domain of the TNF receptor 2

Author(s): Hsiao Ku-chuan | Brissette Renee | Wang Pinger | Fletcher Paul | Rodriguez Vanessa | Lennick Michael | Blume Arthur | Goldstein Neil
Volume: 1
Issue: 1
Year: 2003
Proteome changes in platelets activated by arachidonic acid, collagen, and thrombin

Author(s): Májek Pavel | Reicheltová Zuzana | Štikarová Jana | Suttnar Jiří | Sobotková Alžběta | Dyr Jan
Volume: 8
Issue: 1
Year: 2010
Clinical application for the preservation of phospho-proteins through in-situ tissue stabilization

Author(s): Rountree C Bart | Van Kirk Colleen | You Hanning | Ding Wei | Dang Hien | VanGuilder Heather | Freeman Willard
Volume: 8
Issue: 1
Year: 2010
Online monitoring of immunoaffinity-based depletion of high-abundance blood proteins by UV spectrophotometry using enhanced green fluorescence protein and FITC-labeled human serum albumin

Author(s): Kim Kyunggon | Yu Jiyoung | Min Hophil | Kim Hyunsoo | Kim Byungwook | Yu Hyeong | Kim Youngsoo
Volume: 8
Issue: 1
Year: 2010
Changes in mouse whole saliva soluble proteome induced by tannin-enriched diet

Author(s): Lamy Elsa | Graça Gonçalo | da Costa Gonçalo | Franco Catarina | e Silva Fernando | Baptista Elvira | Coelho Ana
Volume: 8
Issue: 1
Year: 2010
In-depth analysis of the chicken egg white proteome using an LTQ Orbitrap Velos

Author(s): Mann Karlheinz | Mann Matthias
Volume: 9
Issue: 1
Year: 2011
Chicken model of steroid-induced bone marrow adipogenesis using proteome analysis: a preliminary study

Author(s): Li Sing | Lin Ching | Kuo Tzong | Lin Yun | Chen Chia | Lin Way | Chan Wing
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of purified coronavirus infectious bronchitis virus particles

Author(s): Kong Qingming | Xue Chunyi | Ren Xiangpeng | Zhang Chengwen | Li Linlin | Shu Dingming | Bi Yingzuo | Cao Yongchang
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis of the fish pathogen Flavobacterium columnare

Author(s): Dumpala Pradeep | Gülsoy Nagihan | Lawrence Mark | Karsi Attila
Volume: 8
Issue: 1
Year: 2010
A method for protein extraction from different subcellular fractions of laticifer latex in Hevea brasiliensis compatible with 2-DE and MS

Author(s): Wang Xuchu | Shi Minjing | Lu Xiuli | Ma Ruifeng | Wu Chenggong | Guo Anping | Peng Ming | Tian Weimin
Volume: 8
Issue: 1
Year: 2010
Proteomic analysis during larval development and metamorphosis of the spionid polychaete Pseudopolydora vexillosa

Author(s): Mok Flora | Thiyagarajan Vengatesen | Qian Pei-Yuan
Volume: 7
Issue: 1
Year: 2009
An update on the mouse liver proteome

Author(s): Gazzana Giuseppe | Borlak Jürgen
Volume: 7
Issue: 1
Year: 2009
A fractionation method to identify qauntitative changes in protein expression mediated by IGF-1 on the proteome of murine C2C12 myoblasts

Author(s): King Charles | Bouic Kathyrn | Friedmann Theodore
Volume: 7
Issue: 1
Year: 2009
Proteome analysis of the hyaluronic acid-producing bacterium, Streptococcus zooepidemicus

Author(s): Marcellin Esteban | Gruber Christian | Archer Colin | Craik David | Nielsen Lars
Volume: 7
Issue: 1
Year: 2009
A comparison of imputation procedures and statistical tests for the analysis of two-dimensional electrophoresis data

Author(s): Miecznikowski Jeffrey | Damodaran Senthilkumar | Sellers Kimberly | Coling Donald | Salvi Richard | Rabin Richard
Volume: 9
Issue: 1
Year: 2011
Publishing proteomic data

Author(s): Latterich Martin
Volume: 4
Issue: 1
Year: 2006
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