Proteome Science

Predicting DNA-binding locations and orientation on proteins using knowledge-based learning of geometric properties

Author(s): Wang Chien-Chih | Chen Chien-Yu

Volume: 9

Issue: Suppl 1

Year: 2011

A new method for alignment of LC-MALDI-TOF data

Author(s): Tang Zhiqun | Zhang Lihua | Cheema Amrita | Ressom Habtom

Volume: 9

Issue: Suppl 1

Year: 2011

Prediction of DNA-binding protein based on statistical and geometric features and support vector machines

Author(s): Zhou Weiqiang | Yan Hong

Volume: 9

Issue: Suppl 1

Year: 2011

Bayesian non-negative factor analysis for reconstructing transcription factor mediated regulatory networks

Author(s): Meng Jia | Zhang Jianqiu (Michelle) | Chen Yidong | Huang Yufei

Volume: 9

Issue: Suppl 1

Year: 2011

Fast subcellular localization by cascaded fusion of signal-based and homology-based methods

Author(s): Mak Man-Wai | Wang Wei | Kung Sun-Yuan

Volume: 9

Issue: Suppl 1

Year: 2011

Ontology integration to identify protein complex in protein interaction networks

Author(s): Xu Bo | Lin Hongfei | Yang Zhihao

Volume: 9

Issue: Suppl 1

Year: 2011

Prediction of 492 human protein kinase substrate specificities

Author(s): Safaei Javad | Maňuch Ján | Gupta Arvind | Stacho Ladislav | Pelech Steven

Volume: 9

Issue: Suppl 1

Year: 2011

Protein complex detection with semi-supervised learning in protein interaction networks

Author(s): Shi Lei | Lei Xiujuan | Zhang Aidong

Volume: 9

Issue: Suppl 1

Year: 2011

ATPsite: sequence-based prediction of ATP-binding residues

Author(s): Chen Ke | Mizianty Marcin | Kurgan Lukasz

Volume: 9

Issue: Suppl 1

Year: 2011

Peptide charge state determination of tandem mass spectra from low-resolution collision induced dissociation

Author(s): Shi Jinhong | Wu Fang-Xiang

Volume: 9

Issue: Suppl 1

Year: 2011

SProt: sphere-based protein structure similarity algorithm

Author(s): Galgonek Jakub | Hoksza David | Skopal Tomáš

Volume: 9

Issue: Suppl 1

Year: 2011

Processing methods for signal suppression of FTMS data

Author(s): Ma Xuepo | Cui Jian | Zhang Jianqiu

Volume: 9

Issue: Suppl 1

Year: 2011

An effective hybrid of hill climbing and genetic algorithm for 2D triangular protein structure prediction

Author(s): Su Shih-Chieh | Lin Cheng-Jian | Ting Chuan-Kang

Volume: 9

Issue: Suppl 1

Year: 2011

A binary matrix factorization algorithm for protein complex prediction

Author(s): Tu Shikui | Chen Runsheng | Xu Lei

Volume: 9

Issue: Suppl 1

Year: 2011

Applications of graph theory in protein structure identification

Author(s): Yan Yan | Zhang Shenggui | Wu Fang-Xiang

Volume: 9

Issue: Suppl 1

Year: 2011

Identification of protein-RNA interaction sites using the information of spatial adjacent residues

Author(s): Chen Wei | Zhang Shao-Wu | Cheng Yong-Mei | Pan Quan

Volume: 9

Issue: Suppl 1

Year: 2011

Decomposing PPI networks for complex discovery

Author(s): Liu Guimei | Yong Chern Han | Chua Hon Nian | Wong Limsoon

Volume: 9

Issue: Suppl 1

Year: 2011

NWE: Node-weighted expansion for protein complex prediction using random walk distances

Author(s): Maruyama Osamu | Chihara Ayaka

Volume: 9

Issue: Suppl 1

Year: 2011

Sequence and structural features of binding site residues in protein-protein complexes: comparison with protein-nucleic acid complexes

Author(s): Gromiha M | Saranya N | Selvaraj S | Jayaram B | Fukui Kazuhiko

Volume: 9

Issue: Suppl 1

Year: 2011

Unsupervised Integration of Multiple Protein Disorder Predictors: The Method and Evaluation on CASP7, CASP8 and CASP9 Data

Author(s): Zhang Ping | Obradovic Zoran

Volume: 9

Issue: Suppl 1

Year: 2011

Phosphoproteins regulated by heat stress in rice leaves

Volume: 9

Issue: 1

Year: 2011

Analysis of the photosynthetic apparatus in transgenic tobacco plants with altered endogenous cytokinin content: a proteomic study

Author(s): Cortleven Anne | Noben Jean-Paul | Valcke Roland

Volume: 9

Issue: 1

Year: 2011

Comparative Proteomic Analysis of saccharopolyspora spinosa SP06081 and PR2 strains reveals the differentially expressed proteins correlated with the increase of spinosad yield

Volume: 9

Issue: 1

Year: 2011

Immunoproteomic analysis of bacterial proteins of Actinobacillus pleuropneumoniae serotype 1

Volume: 9

Issue: 1

Year: 2011

High-density lipoprotein proteome dynamics in human endotoxemia

Volume: 9

Issue: 1

Year: 2011

Discrimination of grade 2 and 3 cervical intraepithelial neoplasia by means of analysis of water soluble proteins recovered from cervical biopsies

Volume: 9

Issue: 1

Year: 2011

Multi-Segment Direct Inject nano-ESI-LTQ-FT-ICR-MS/MS For Protein Identification

Author(s): Chen Jing | Canales Lorena | Neal Rachel

Volume: 9

Issue: 1

Year: 2011

A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study

Volume: 9

Issue: 1

Year: 2011

Analysis of EGFR signaling pathway in nasopharyngeal carcinoma cells by quantitative phosphoproteomics

Volume: 9

Issue: 1

Year: 2011

Identification of a novel SEREX antigen family, ECSA, in esophageal squamous cell carcinoma

Volume: 9

Issue: 1

Year: 2011

Identification of maturation and protein synthesis related proteins from porcine oocytes during in vitro maturation

Volume: 9

Issue: 1

Year: 2011

Clinical and Technical Phosphoproteomic Research

Author(s): López Elena | López Isabel | Ferreira Antonio | Sequí Julia

Volume: 9

Issue: 1

Year: 2011

Evaluation of formalin-fixed paraffin-embedded tissues in the proteomic analysis of parathyroid glands

Volume: 9

Issue: 1

Year: 2011

Comparative proteomics analysis of proteins expressed in the I-1 and I-2 internodes of strawberry stolons

Volume: 9

Issue: 1

Year: 2011

Chronic kidney disease-related atherosclerosis - proteomic studies of blood plasma

Volume: 9

Issue: 1

Year: 2011

Proteomic and immunoproteomic characterization of a DIVA subunit vaccine against Actinobacillus pleuropneumoniae

Author(s): Buettner Falk | Konze Sarah | Maas Alexander | Gerlach Gerald

Volume: 9

Issue: 1

Year: 2011

Evaluation of three high abundance protein depletion kits for umbilical cord serum proteomics

Volume: 9

Issue: 1

Year: 2011

Improving Detection Accuracy of Lung Cancer Serum Proteomic Profiling via Two-Stage Training Process

Volume: 9

Issue: 1

Year: 2011

Periostin identified as a potential biomarker of prostate cancer by iTRAQ-proteomics analysis of prostate biopsy

Volume: 9

Issue: 1

Year: 2011

Deglycosylation and label-free quantitative LC-MALDI MS applied to efficient serum biomarker discovery of lung cancer

Volume: 9

Issue: 1

Year: 2011

Identification of Apo-A1 as a biomarker for early diagnosis of bladder transitional cell carcinoma

Volume: 9

Issue: 1

Year: 2011

A proteomic analysis of Curcuma comosa Roxb. rhizomes

Author(s): Boonmee Apaporn | Srisomsap Chantragan | Chokchaichamnankit Daranee | Karnchanatat Aphichart | Sangvanich Polkit

Volume: 9

Issue: 1

Year: 2011

Proteomic analysis of young leaves at three developmental stages in an albino tea cultivar

Volume: 9

Issue: 1

Year: 2011

Identification of azurocidin as a potential periodontitis biomarker by a proteomic analysis of gingival crevicular fluid

Author(s): Choi Young-Jin | Heo Sun-Hee | Lee Jae-Mok | Cho Je-Yoel

Volume: 9

Issue: 1

Year: 2011

Antibody cross-linking and target elution protocols used for immunoprecipitation significantly modulate signal-to noise ratio in downstream 2D-PAGE analysis

Author(s): Sousa Mirta | Steen Kristian | Hagen Lars | Slupphaug Geir

Volume: 9

Issue: 1

Year: 2011

Proteomic analysis of pregnancy-related proteins from pig uterus endometrium during pregnancy

Volume: 9

Issue: 1

Year: 2011

Comparative analysis of the Spirulina platensis subcellular proteome in response to low- and high-temperature stresses: uncovering cross-talk of signaling components

Volume: 9

Issue: 1

Year: 2011

In vivo rescue of alveolar macrophages from SP-A knockout mice with exogenous SP-A nearly restores a wild type intracellular proteome; actin involvement

Author(s): Phelps David | Umstead Todd | Quintero Omar | Yengo Christopher | Floros Joanna

Volume: 9

Issue: 1

Year: 2011

Differential chromatin proteomics of the MMS-induced DNA damage response in yeast

Author(s): Kim Dong | Gidvani Rohan | Ingalls Brian | Duncker Bernard | McConkey Brendan

Volume: 9

Issue: 1

Year: 2011

Comparative shotgun proteomic analysis of Clostridium acetobutylicum from butanol fermentation using glucose and xylose

Volume: 9

Issue: 1

Year: 2011

Optimizing Human Synovial Fluid Preparation for Two-Dimensional Gel Electrophoresis

Volume: 9

Issue: 1

Year: 2011

Identification of stromal proteins overexpressed in nodular sclerosis Hodgkin lymphoma

Volume: 9

Issue: 1

Year: 2011

Brain region specific mitophagy capacity could contribute to selective neuronal vulnerability in Parkinson's disease

Volume: 9

Issue: 1

Year: 2011

Ligand-dependent differences in estrogen receptor beta-interacting proteins identified in lung adenocarcinoma cells corresponds to estrogenic responses

Author(s): Ivanova MM | Abner SM | Pierce WM | Klinge CM

Volume: 9

Issue: 1

Year: 2011

Plasma proteome changes associated with refractory cytopenia with multilineage dysplasia

Author(s): Májek Pavel | Reicheltová Zuzana | Suttnar Jiří | Čermák Jaroslav | Dyr Jan

Volume: 9

Issue: 1

Year: 2011

A label-free quantitative shotgun proteomics analysis of rice grain development

Author(s): Lee Joohyun | Koh Hee-Jong

Volume: 9

Issue: 1

Year: 2011

Differential proteome analysis of human embryonic kidney cell line (HEK-293) following mycophenolic acid treatment

Author(s): Qasim Muhammad | Rahman Hazir | Oellerich Michael | Asif Abdul

Volume: 9

Issue: 1

Year: 2011

2D DIGE analysis of maternal plasma for potential biomarkers of Down Syndrome

Volume: 9

Issue: 1

Year: 2011

Proteomic analysis of mare follicular fluid during late follicle development

Author(s): Fahiminiya Somayyeh | Labas Valérie | Roche Stéphane | Dacheux Jean-Louis | Gérard Nadine

Volume: 9

Issue: 1

Year: 2011

Analysis of the biofilm proteome of Xylella fastidiosa

Author(s): Silva Mariana | De Souza Alessandra | Takita Marco | Labate Carlos | Machado Marcos

Volume: 9

Issue: 1

Year: 2011

Combination of hydrogel nanoparticles and proteomics to reveal secreted proteins associated with decidualization of human uterine stromal cells

Author(s): Paule Sarah | Meehan Katie | Rainczuk Adam | Stephens Andrew | Nie Guiying

Volume: 9

Issue: 1

Year: 2011

Improved protein arrays for quantitative systems analysis of the dynamics of signaling pathway interactions

Volume: 9

Issue: 1

Year: 2011

Enriched sera protein profiling for detection of non-small cell lung cancer biomarkers

Volume: 9

Issue: 1

Year: 2011

Differential expression of proteins and phosphoproteins during larval metamorphosis of the polychaete Capitella sp. I

Author(s): Chandramouli Kondethimmanahalli | Soo Lisa | Qian Pei-Yuan

Volume: 9

Issue: 1

Year: 2011

Proteomics study of changes in soybean lines resistant and sensitive to Phytophthora sojae

Volume: 9

Issue: 1

Year: 2011

Impact of clostridial glucosylating toxins on the proteome of colonic cells determined by isotope-coded protein labeling and LC-MALDI

Author(s): Jochim Nelli | Gerhard Ralf | Just Ingo | Pich Andreas

Volume: 9

Issue: 1

Year: 2011

Resveratrol suppresses human colon cancer cell proliferation and induces apoptosis via targeting the pentose phosphate and the talin-FAK signaling pathways-A proteomic approach

Author(s): Vanamala Jairam | Radhakrishnan Sridhar | Reddivari Lavanya | Bhat Vadiraja | Ptitsyn Andrey

Volume: 9

Issue: 1

Year: 2011

Comparison of human glomerulus proteomic profiles obtained from low quantities of samples by different mass spectrometry with the comprehensive database

Volume: 9

Issue: 1

Year: 2011

Profiling of serum and tissue high abundance acute-phase proteins of patients with epithelial and germ line ovarian carcinoma

Author(s): Chen Yeng | Lim Boon-Kiong | Peh Suat-Cheng | Abdul-Rahman Puteri | Hashim Onn

Volume: 6

Issue: 1

Year: 2008

Deciphering animal development through proteomics: requirements and prospects

Author(s): Reintsch Wolfgang | Mandato Craig

Volume: 6

Issue: 1

Year: 2008

Protein profiling of the dimorphic, pathogenic fungus, Penicillium marneffei

Volume: 6

Issue: 1

Year: 2008

Proteomic changes in rat hippocampus and adrenals following short-term sleep deprivation

Volume: 6

Issue: 1

Year: 2008

Proteomic profiling of urine for the detection of colon cancer

Volume: 6

Issue: 1

Year: 2008

Comprehensive analysis of the mouse renal cortex using two-dimensional HPLC – tandem mass spectrometry

Author(s): Zhao Yingxin | Denner Larry | Haidacher Sigmund | LeJeune Wanda | Tilton Ronald

Volume: 6

Issue: 1

Year: 2008

Proteome of monocyte priming by lipopolysaccharide, including changes in interleukin-1beta and leukocyte elastase inhibitor

Author(s): Pabst Michael | Pabst Karen | Handsman David | Beranova-Giorgianni Sarka | Giorgianni Francesco

Volume: 6

Issue: 1

Year: 2008

Proteome alteration induced by hTERT transfection of human fibroblast cells

Volume: 6

Issue: 1

Year: 2008

Detection and identification of NAP-2 as a biomarker in hepatitis B-related hepatocellular carcinoma by proteomic approach

Volume: 6

Issue: 1

Year: 2008

Peptides OFFGEL electrophoresis: a suitable pre-analytical step for complex eukaryotic samples fractionation compatible with quantitative iTRAQ labeling

Author(s): Chenau Jérôme | Michelland Sylvie | Sidibe Jonathan | Seve Michel

Volume: 6

Issue: 1

Year: 2008

Early antibody response against Mycobacterium avium subspecies paratuberculosis antigens in subclinical cattle

Volume: 6

Issue: 1

Year: 2008

Automated production of recombinant human proteins as resource for proteome research

Author(s): Kohl Thorsten | Schmidt Christian | Wiemann Stefan | Poustka Annemarie | Korf Ulrike

Volume: 6

Issue: 1

Year: 2008

Proteome profiling of embryo chick retina

Author(s): Mizukami Mina | Kanamoto Takashi | Souchelnytskyi Nazariy | Kiuchi Yoshiaki

Volume: 6

Issue: 1

Year: 2008

Data mining of plasma peptide chromatograms for biomarkers of air contaminant exposures

Author(s): Karthikeyan Subramanian | Kumarathasan Premkumari | Vincent Renaud

Volume: 6

Issue: 1

Year: 2008

Author(s): Mi Jia | Garcia-Arcos Itsaso | Alvarez Ruben | Cristobal Susana

Volume: 5

Issue: 1

Year: 2007

Proteomic profile determination of autosomal aneuploidies by mass spectrometry on amniotic fluids

Volume: 6

Issue: 1

Year: 2008

Increase in local protein concentration by field-inversion gel electrophoresis

Volume: 5

Issue: 1

Year: 2007

Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils

Volume: 5

Issue: 1

Year: 2007

Quantifying raft proteins in neonatal mouse brain by 'tube-gel' protein digestion label-free shotgun proteomics

Volume: 5

Issue: 1

Year: 2007

Proteomic analyses of retina of excitatory amino acid carrier 1 deficient mice

Volume: 5

Issue: 1

Year: 2007

Bacillus anthracis secretome time course under host-simulated conditions and identification of immunogenic proteins

Volume: 5

Issue: 1

Year: 2007

Laboratory methods to improve SELDI peak detection and quantitation

Author(s): Rollin Dominique | Whistler Toni | Vernon Suzanne

Volume: 5

Issue: 1

Year: 2007

PrestOMIC, an open source application for dissemination of proteomic datasets by individual laboratories

Author(s): Howes Charles | Foster Leonard

Volume: 5

Issue: 1

Year: 2007

SELDI-TOF-MS ProteinChip array profiling of T-cell clones propagated in long-term culture identifies human profilin-1 as a potential bio-marker of immunosenescence

Author(s): Mazzatti Dawn | Pawelec Graham | Longdin Robin | Powell Jonathan | Forsey Rosalyn

Volume: 5

Issue: 1

Year: 2007

Proteome characterization of a human urothelial cell line resistant to the bladder carcinogen 4-aminobiphenyl

Volume: 5

Issue: 1

Year: 2007

Methods for peptide identification by spectral comparison

Volume: 5

Issue: 1

Year: 2007

Proteomics profiling of urine with surface enhanced laser desorption/ionization time of flight mass spectrometry

Author(s): Roelofsen Han | Alvarez-Llamas Gloria | Schepers Marianne | Landman Karloes | Vonk Roel

Volume: 5

Issue: 1

Year: 2007

Proteomic analysis of tyrosine phosphorylation during human liver transplantation

Volume: 5

Issue: 1

Year: 2007

The use of proteomics in identifying differentially expressed serum proteins in humans with type 2 diabetes

Author(s): Sundsten Tea | Eberhardson Michael | Göransson Michael | Bergsten Peter

Volume: 4

Issue: 1

Year: 2006

Comparative proteomic analysis of high cell density cultivations with two recombinant Bacillus megaterium strains for the production of a heterologous dextransucrase

Author(s): Wang Wei | Hollmann Rajan | Deckwer Wolf-Dieter

Volume: 4

Issue: 1

Year: 2006

Signal stability of Cy3 and Cy5 on antibody microarrays

Author(s): Gu Qiang | Sivanandam Thamil Mani | Kim Caroline

Volume: 4

Issue: 1

Year: 2006

Data processing and classification analysis of proteomic changes: a case study of oil pollution in the mussel, Mytilus edulis

Author(s): Monsinjon Tiphaine | Andersen Odd | Leboulenger François | Knigge Thomas

Volume: 4

Issue: 1

Year: 2006

Proteome-level display by 2-dimensional chromatography of extracellular matrix-dependent modulation of the phenotype of bladder cancer cells

Volume: 4

Issue: 1

Year: 2006

High-throughput screening of cellulase F mutants from multiplexed plasmid sets using an automated plate assay on a functional proteomic robotic workcell

Volume: 4

Issue: 1

Year: 2006

Competition between bound and free peptides in an ELISA-based procedure that assays peptides derived from protein digests

Author(s): Braitbard Ori | Glickstein Hava | Bishara-Shieban Janette | Pace Umberto | Stein Wilfred

Volume: 4

Issue: 1

Year: 2006

Ontogenetic variations in the venom proteome of the Amazonian snake Bothrops atrox

Volume: 4

Issue: 1

Year: 2006

Proteomic analysis of acidic chaperones, and stress proteins in extreme halophile Halobacterium NRC-1: a comparative proteomic approach to study heat shock response

Author(s): Shukla Hem

Volume: 4

Issue: 1

Year: 2006

A systems approach to clinical oncology: Focus on breast cancer

Author(s): Abramovitz Mark | Leyland-Jones Brian

Volume: 4

Issue: 1

Year: 2006

Proteomic identification of Drosophila melanogaster male accessory gland proteins, including a pro-cathepsin and a soluble γ-glutamyl transpeptidase

Volume: 4

Issue: 1

Year: 2006

Optimising the Use of TRIzol-extracted Proteins in Surface Enhanced Laser Desorption/ Ionization (SELDI) Analysis

Volume: 4

Issue: 1

Year: 2006

Application of protein lysate microarrays to molecular marker verification and quantification

Volume: 3

Issue: 1

Year: 2005

Molecular weight assessment of proteins in total proteome profiles using 1D-PAGE and LC/MS/MS

Author(s): Ahmad Q Rushdy | Nguyen Dat | Wingerd Mark | Church George | Steffen Martin

Volume: 3

Issue: 1

Year: 2005

Proteome analysis of a recombinant Bacillus megaterium strain during heterologous production of a glucosyltransferase

Volume: 3

Issue: 1

Year: 2005

Target selection of soluble protein complexes for structural proteomics studies

Author(s): Shen Weiping | Yun Steven | Tam Bonny | Dalal Kush | Pio Frederic

Volume: 3

Issue: 1

Year: 2005

Mass spectrometrical analysis of recombinant human growth hormone (Genotropin®) reveals amino acid substitutions in 2% of the expressed protein

Author(s): Hepner Felix | Cszasar Edina | Roitinger Elisabeth | Lubec Gert

Volume: 3

Issue: 1

Year: 2005

Expressional patterns of chaperones in ten human tumor cell lines

Author(s): Myung Jae-Kyung | Afjehi-Sadat Leila | Felizardo-Cabatic Maureen | Slavc Irene | Lubec Gert

Volume: 2

Issue: 1

Year: 2004

Validation of a prefractionation method followed by two-dimensional electrophoresis – Applied to cerebrospinal fluid proteins from frontotemporal dementia patients

Author(s): Hansson Sara | Puchades Maja | Blennow Kaj | Sjögren Magnus | Davidsson Pia

Volume: 2

Issue: 1

Year: 2004

Characterization of the microheterogeneity of transthyretin in plasma and urine using SELDI-TOF-MS immunoassay

Author(s): Schweigert Florian | Wirth Kerstin | Raila Jens

Volume: 2

Issue: 1

Year: 2004

Optimisation of the two-dimensional gel electrophoresis protocol using the Taguchi approach

Author(s): Khoudoli Guennadi | Porter Iain | Blow J Julian | Swedlow Jason

Volume: 2

Issue: 1

Year: 2004

A data management system for structural genomics

Author(s): Raymond Stéphane | O'Toole Nicholas | Cygler Miroslaw

Volume: 2

Issue: 1

Year: 2004

Altered expression of hypothetical proteins in hippocampus of transgenic mice overexpressing human Cu/Zn-superoxide dismutase 1

Volume: 2

Issue: 1

Year: 2004

From sequence to structure and back again: approaches for predicting protein-DNA binding

Author(s): Höglund Annette | Kohlbacher Oliver

Volume: 2

Issue: 1

Year: 2004

Evidence for existence of thirty hypothetical proteins in rat brain

Author(s): Shin Joo-Ho | Yang Jae-Won | Juranville Jean-François | Fountoulakis Michael | Lubec Gert

Volume: 2

Issue: 1

Year: 2004

The proteome of human brain microdialysate

Volume: 1

Issue: 1

Year: 2003

Protein identification from two-dimensional gel electrophoresis analysis of Klebsiella pneumoniae by combined use of mass spectrometry data and raw genome sequences

Author(s): Wang Wei | Sun Jibin | Nimtz Manfred | Deckwer Wolf-Dieter | Zeng An-Ping

Volume: 1

Issue: 1

Year: 2003

In silico proteome analysis to facilitate proteomics experiments using mass spectrometry

Author(s): Cagney Gerard | Amiri Shiva | Premawaradena Thanuja | Lindo Micheal | Emili Andrew

Volume: 1

Issue: 1

Year: 2003

The proteome of neural stem cells from adult rat hippocampus

Author(s): Maurer Martin | Feldmann Robert | Fütterer Carsten | Kuschinsky Wolfgang

Volume: 1

Issue: 1

Year: 2003

MALDI/MS peptide mass fingerprinting for proteome analysis: identification of hydrophobic proteins attached to eucaryote keratinocyte cytoplasmic membrane using different matrices in concert

Author(s): Gonnet Florence | Lemaître Gilles | Waksman Gilles | Tortajada Jeanine

Volume: 1

Issue: 1

Year: 2003

Deciphering the complexities of the wheat flour proteome using quantitative two-dimensional electrophoresis, three proteases and tandem mass spectrometry

Author(s): Dupont Frances | Vensel William | Tanaka Charlene | Hurkman William | Altenbach Susan

Volume: 9

Issue: 1

Year: 2011

Proteomic analysis of chicken embryonic trachea and kidney tissues after infection in ovo by avian infectious bronchitis coronavirus

Volume: 9

Issue: 1

Year: 2011

Characterization of proteome alterations in Phanerochaete chrysosporium in response to lead exposure

Volume: 9

Issue: 1

Year: 2011

Urinary protein profiling in hyperactive delirium and non-delirium cardiac surgery ICU patients

Volume: 9

Issue: 1

Year: 2011

Identification of low-abundance proteins via fractionation of the urine proteome with weak anion exchange chromatography

Volume: 9

Issue: 1

Year: 2011

Targeted quantitative mass spectrometric immunoassay for human protein variants

Author(s): Trenchevska Olgica | Nedelkov Dobrin

Volume: 9

Issue: 1

Year: 2011

Systems analysis of endothelial cell plasma membrane proteome of rat lung microvasculature

Author(s): Li Yan | Massey Kerri | Witkiewicz Halina | Schnitzer Jan

Volume: 9

Issue: 1

Year: 2011

Differential analysis of glioblastoma multiforme proteome by a 2D-DIGE approach

Volume: 9

Issue: 1

Year: 2011

A large-scale electrophoresis- and chromatography-based determination of gene expression profiles in bovine brain capillary endothelial cells after the re-induction of blood-brain barrier properties

Volume: 8

Issue: 1

Year: 2010

Proteome of the phytopathogen Xanthomonas citri subsp. citri: a global expression profile

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of streptomycin resistant and sensitive clinical isolates of Mycobacterium tuberculosis

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of small acid soluble proteins in the spore core of Bacillus subtilis ΔprpE and 168 strains with predictions of peptides liquid chromatography retention times as an additional tool in protein identification

Volume: 8

Issue: 1

Year: 2010

A comparison of imputation procedures and statistical tests for the analysis of two-dimensional electrophoresis data

Author(s): Miecznikowski Jeffrey | Damodaran Senthilkumar | Sellers Kimberly | Rabin Richard

Volume: 8

Issue: 1

Year: 2010

Use of cervicovaginal fluid for the identification of biomarkers for pathologies of the female genital tract

Author(s): Zegels Geert | Van Raemdonck Geert | Tjalma Wiebren | Van Ostade Xaveer

Volume: 8

Issue: 1

Year: 2010

A label-free differential quantitative mass spectrometry method for the characterization and identification of protein changes during citrus fruit development

Volume: 8

Issue: 1

Year: 2010

RNAi-based validation of antibodies for reverse phase protein arrays

Volume: 8

Issue: 1

Year: 2010

A proteomic analysis of C-reactive protein stimulated THP-1 monocytes

Volume: 9

Issue: 1

Year: 2011

Clinical proteomics for liver disease: a promising approach for discovery of novel biomarkers

Author(s): Uto Hirofumi | Kanmura Shuji | Takami Yoichiro | Tsubouchi Hirohito

Volume: 8

Issue: 1

Year: 2010

Cardiogenol C can induce Mouse Hair Bulge Progenitor Cells to Transdifferentiate into Cardiomyocyte-like Cells

Volume: 9

Issue: 1

Year: 2011

Analysis of the proteome of human airway epithelial secretions

Author(s): Ali Mehboob | Lillehoj Erik | Park Yongsung | Kyo Yoshiyuki | Kim K

Volume: 9

Issue: 1

Year: 2011

Plasma peptidome profiling of acute hepatitis E patients by MALDI-TOF/TOF

Volume: 9

Issue: 1

Year: 2011

Factors affecting the accuracy of urine-based biomarkers of BSE

Volume: 9

Issue: 1

Year: 2011

Analysis of protein composition of rabbit aqueous humor following two different cataract surgery incision procedures using 2-DE and LC-MS/MS

Author(s): Stastna Miroslava | Behrens Ashley | McDonnell Peter | Van Eyk Jennifer

Volume: 9

Issue: 1

Year: 2011

An automated growth enclosure for metabolic labeling of Arabidopsis thaliana with 13C-carbon dioxide - an in vivo labeling system for proteomics and metabolomics research

Volume: 9

Issue: 1

Year: 2011

Identification and structural analysis of C-terminally truncated collapsin response mediator protein-2 in a murine model of prion diseases

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell

Volume: 8

Issue: 1

Year: 2010

A proteomic view of Caenorhabditis elegans caused by short-term hypoxic stress

Volume: 8

Issue: 1

Year: 2010

Proteomic characterization of vanA-containing Enterococcus recovered from Seagulls at the Berlengas Natural Reserve, W Portugal

Volume: 8

Issue: 1

Year: 2010

Influence of Moraxella sp. colonization on the kidney proteome of farmed gilthead sea breams (Sparus aurata, L.)

Volume: 8

Issue: 1

Year: 2010

The extracellular proteome of Rhizobium etli CE3 in exponential and stationary growth phase

Author(s): Meneses Niurka | Mendoza-Hernández Guillermo | Encarnación Sergio

Volume: 8

Issue: 1

Year: 2010

Analysis of proteome response to the mobile phone radiation in two types of human primary endothelial cells

Author(s): Nylund Reetta | Kuster Niels | Leszczynski Dariusz

Volume: 8

Issue: 1

Year: 2010

Novel O-palmitolylated beta-E1 subunit of pyruvate dehydrogenase is phosphorylated during ischemia/reperfusion injury

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix

Author(s): Mann Karlheinz | Wilt Fred | Poustka Albert

Volume: 8

Issue: 1

Year: 2010

Differences in the BAL proteome after Klebsiella pneumoniae infection in wild type and SP-A-/- mice

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of differentially expressed proteins in Penaeus monodon hemocytes after Vibrio harveyi infection

Author(s): Somboonwiwat Kunlaya | Chaikeeratisak Vorrapon | Wang Hao-Ching | Fang Lo Chu | Tassanakajon Anchalee

Volume: 8

Issue: 1

Year: 2010

Quantitative comparison of lipoprotein fractions derived from human plasma and serum by liquid chromatography-tandem mass spectrometry

Author(s): Collins Lisamarie | Olivier Michael

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of proteins expressing in regions of rat brain by a combination of SDS-PAGE with nano-liquid chromatography-quadrupole-time of flight tandem mass spectrometry

Volume: 8

Issue: 1

Year: 2010

Dependency on de novo protein synthesis and proteomic changes during metamorphosis of the marine bryozoan Bugula neritina

Author(s): Wong Yue | Arellano Shawn | Zhang Huoming | Ravasi Timothy | Qian Pei-Yuan

Volume: 8

Issue: 1

Year: 2010

Quantitative proteomic analysis by iTRAQ® for the identification of candidate biomarkers in ovarian cancer serum

Author(s): Boylan Kristin | Andersen John | Anderson Lorraine | Higgins LeeAnn | Skubitz Amy

Volume: 8

Issue: 1

Year: 2010

A novel anti-virulence gene revealed by proteomic analysis in Shigella flexneri 2a

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of primary duck hepatocytes infected with duck hepatitis B virus

Volume: 8

Issue: 1

Year: 2010

Identification of latexin by a proteomic analysis in rat normal articular cartilage

Volume: 8

Issue: 1

Year: 2010

Development of high-yield autofluorescent protein microarrays using hybrid cell-free expression with combined Escherichia coli S30 and wheat germ extracts

Author(s): Zárate Xristo | Henderson David | Phillips Keenan | Lake April | Galbraith David

Volume: 8

Issue: 1

Year: 2010

Identification of proteins related to the stress response in Enterococcus faecalis V583 caused by bovine bile

Volume: 8

Issue: 1

Year: 2010

Differential expression of proteomics models of colorectal cancer, colorectal benign disease and healthy controls

Volume: 8

Issue: 1

Year: 2010

Proteome analysis of human Wharton's jelly cells during in vitro expansion

Volume: 8

Issue: 1

Year: 2010

Shotgun proteomic analysis of mulberry dwarf phytoplasma

Author(s): Ji Xianling | Gai Yingping | Lu Baoyun | Zheng Chengchao | Mu Zhimei

Volume: 8

Issue: 1

Year: 2010

Identification of a novel Plasmopara halstedii elicitor protein combining de novo peptide sequencing algorithms and RACE-PCR

Volume: 8

Issue: 1

Year: 2010

Proteome characterization of cassava (Manihot esculenta Crantz) somatic embryos, plantlets and tuberous roots

Volume: 8

Issue: 1

Year: 2010

A novel method for sample preparation of fresh lung cancer tissue for proteomics analysis by tumor cell enrichment and removal of blood contaminants

Volume: 8

Issue: 1

Year: 2010

Alterations in the red blood cell membrane proteome in alzheimer's subjects reflect disease-related changes and provide insight into altered cell morphology

Volume: 8

Issue: 1

Year: 2010

Proteome differences associated with fat accumulation in bovine subcutaneous adipose tissues

Author(s): Zhao Yong | Basu Urmila | Dodson Michael | Basarb John | Guan Le

Volume: 8

Issue: 1

Year: 2010

Effects of UVB-induced oxidative stress on protein expression and specific protein oxidation in normal human epithelial keratinocytes: a proteomic approach

Volume: 8

Issue: 1

Year: 2010

A gel-free approach in vascular smooth muscle cell proteome: perspectives for a better insight into activation

Volume: 8

Issue: 1

Year: 2010

Downregulated expression of HSP27 in human low-grade glioma tissues discovered by a quantitative proteomic analysis

Volume: 8

Issue: 1

Year: 2010

Proteome analysis of soybean leaves, hypocotyls and roots under salt stress

Volume: 8

Issue: 1

Year: 2010

Localization of proteins in the cell wall of Mycobacterium avium subsp. paratuberculosis K10 by proteomic analysis

Author(s): He Zhiguo | De Buck Jeroen

Volume: 8

Issue: 1

Year: 2010

Changes in the proteomes of the hemocytes and fat bodies of the flesh fly Sarcophaga bullata larvae after infection by Escherichia coli

Author(s): Masova Alice | Sanda Miloslav | Jiracek Jiri | Selicharova Irena

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of regenerating mouse liver following 50% partial hepatectomy

Volume: 7

Issue: 1

Year: 2009

Effects of MMP-9 inhibition by doxycycline on proteome of lungs in high tidal volume mechanical ventilation-induced acute lung injury

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of prolactinoma cells by immuno-laser capture microdissection combined with online two-dimensional nano-scale liquid chromatography/mass spectrometry

Volume: 8

Issue: 1

Year: 2010

Plasma proteome analysis of patients with type 1 diabetes with diabetic nephropathy

Volume: 8

Issue: 1

Year: 2010

Phosphoproteomes of Strongylocentrotus purpuratus shell and tooth matrix: identification of a major acidic sea urchin tooth phosphoprotein, phosphodontin

Author(s): Mann Karlheinz | Poustka Albert | Mann Matthias

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of the metabolic adaptation of the biocontrol agent Pseudozyma flocculosa leading to glycolipid production

Author(s): Hammami Walid | Chain Florian | Michaud Dominique | Bélanger Richard

Volume: 8

Issue: 1

Year: 2010

Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome

Volume: 8

Issue: 1

Year: 2010

Activity-based protein profiling of the hepatitis C virus replication in Huh-7 hepatoma cells using a non-directed active site probe

Author(s): Singaravelu Ragunath | Blais David | McKay Craig | Pezacki John

Volume: 8

Issue: 1

Year: 2010

Comparative proteomic analysis of pathogenic and non-pathogenic strains from the swine pathogen Mycoplasma hyopneumoniae

Author(s): Pinto Paulo | Klein Cátia | Zaha Arnaldo | Ferreira Henrique

Volume: 7

Issue: 1

Year: 2009

Quantitative mass spectrometry of TATA binding protein-containing complexes and subunit phosphorylations during the cell cycle

Author(s): Pijnappel WWM Pim | Kolkman Annemieke | Baltissen Marijke | Heck Albert | Timmers HT Marc

Volume: 7

Issue: 1

Year: 2009

A comparison between protein profiles of B cell subpopulations and mantle cell lymphoma cells

Author(s): Stranneheim Henrik | Orre Lukas | Lehtiö Janne | Flygare Jenny

Volume: 7

Issue: 1

Year: 2009

Author(s): Andersson Björn | Hellgren Gunnel | Nierop Andreas | Hochberg Ze'ev | Albertsson-Wikland Kerstin

Volume: 7

Issue: 1

Year: 2009

Functional phosphoproteomic profiling of phosphorylation sites in membrane fractions of salt-stressed Arabidopsis thaliana

Volume: 7

Issue: 1

Year: 2009

Enrichment and proteomic analysis of plasma membrane from rat dorsal root ganglions

Volume: 7

Issue: 1

Year: 2009

Optimized sample preparation for two-dimensional gel electrophoresis of soluble proteins from chicken bursa of Fabricius

Volume: 7

Issue: 1

Year: 2009

Plasma and urine biomarkers in acute viral hepatitis E

Author(s): Taneja Shikha | Sen Somdutta | Gupta Vijay | Aggarwal Rakesh | Jameel Shahid

Volume: 7

Issue: 1

Year: 2009

Subcellular proteomic characterization of the high-temperature stress response of the cyanobacterium Spirulina platensis

Volume: 7

Issue: 1

Year: 2009

Proteomic profiling of L-cysteine induced selenite resistance in Enterobacter sp. YSU

Volume: 7

Issue: 1

Year: 2009

Large-scale analysis of protein expression changes in human keratinocytes immortalized by human papilloma virus type 16 E6 and E7 oncogenes

Volume: 7

Issue: 1

Year: 2009

Prediction of outcome of non-small cell lung cancer patients treated with chemotherapy and bortezomib by time-course MALDI-TOF-MS serum peptide profiling

Author(s): Voortman Johannes | Pham Thang | Knol Jaco | Giaccone Giuseppe | Jimenez Connie

Volume: 7

Issue: 1

Year: 2009

Proteomic analysis of total cellular proteins of human neutrophils

Volume: 7

Issue: 1

Year: 2009

Proteome analysis of the Escherichia coli heat shock response under steady-state conditions

Author(s): Lüders Svenja | Fallet Claas | Franco-Lara Ezequiel

Volume: 7

Issue: 1

Year: 2009

2-DE analysis indicates that Acinetobacter baumannii displays a robust and versatile metabolism

Volume: 7

Issue: 1

Year: 2009

Proteomic profiling of glucocorticoid-exposed myogenic cells: Time series assessment of protein translocation and transcription of inactive mRNAs

Author(s): Reeves Erica | Gordish-Dressman Heather | Hoffman Eric | Hathout Yetrib

Volume: 7

Issue: 1

Year: 2009

Identification of protein functions using a machine-learning approach based on sequence-derived properties

Author(s): Lee Bum | Shin Moon | Oh Young | Oh Hae | Ryu Keun

Volume: 7

Issue: 1

Year: 2009

Enhanced detection method for corneal protein identification using shotgun proteomics

Author(s): Meade Mitchell | Shiyanov Pavel | Schlager John

Volume: 7

Issue: 1

Year: 2009

Altered proteolytic events in experimental autoimmune encephalomyelitis discovered by iTRAQ shotgun proteomics analysis of spinal cord

Volume: 7

Issue: 1

Year: 2009

Comparison of two label-free global quantitation methods, APEX and 2D gel electrophoresis, applied to the Shigella dysenteriae proteome

Volume: 7

Issue: 1

Year: 2009

Proteomic analysis of the response of the plant growth-promoting bacterium Pseudomonas putida UW4 to nickel stress

Author(s): Cheng Zhenyu | Wei Yi-Yun | Sung Wilson | Glick Bernard | McConkey Brendan

Volume: 7

Issue: 1

Year: 2009

Classification-based comparison of pre-processing methods for interpretation of mass spectrometry generated clinical datasets

Volume: 7

Issue: 1

Year: 2009

Mitochondrial proteomics on human fibroblasts for identification of metabolic imbalance and cellular stress

Volume: 7

Issue: 1

Year: 2009

Comprehensive proteomic analysis of human cervical-vaginal fluid using colposcopy samples

Author(s): Zegels Geert | Van Raemdonck Geert | Coen Edmond | Tjalma Wiebren | Van Ostade Xaveer

Volume: 7

Issue: 1

Year: 2009

A novel approach to denoising ion trap tandem mass spectra

Author(s): Ding Jiarui | Shi Jinhong | Poirier Guy | Wu Fang-Xiang

Volume: 7

Issue: 1

Year: 2009

Proteomic analysis of phosphoproteins sensitive to a phosphatidylinositol 3-kinase inhibitor, ZSTK474, by using SELDI-TOF MS

Author(s): Akashi Tetsuyuki | Yamori Takao

Volume: 7

Issue: 1

Year: 2009

Proteomic study on gender differences in aging kidney of mice

Author(s): Amelina Hanna | Cristobal Susana

Volume: 7

Issue: 1

Year: 2009

Discovery and identification of potential biomarkers of pediatric Acute Lymphoblastic Leukemia

Volume: 7

Issue: 1

Year: 2009

Integral and peripheral association of proteins and protein complexes with Yersinia pestis inner and outer membranes

Volume: 7

Issue: 1

Year: 2009

Biomarkers of HIV-1 associated dementia: proteomic investigation of sera

Author(s): Wiederin Jayme | Rozek Wojciech | Duan Fenghai | Ciborowski Pawel

Volume: 7

Issue: 1

Year: 2009

Identification and bioinformatic analysis of the membrane proteins of synechocystis sp. PCC 6803

Author(s): Wang Yingchun | Xu Wu | Chitnis Parag

Volume: 7

Issue: 1

Year: 2009

The impact of surfactant protein-A on ozone-induced changes in the mouse bronchoalveolar lavage proteome

Author(s): Haque Rizwanul | Umstead Todd | Freeman Willard | Floros Joanna | Phelps David

Volume: 7

Issue: 1

Year: 2009

Two-dimensional gel proteome reference map of human small intestine

Volume: 7

Issue: 1

Year: 2009

Identification of pancreatic cancer invasion-related proteins by proteomic analysis

Volume: 7

Issue: 1

Year: 2009

Protein expression profiling during chick retinal maturation: a proteomics-based approach

Volume: 6

Issue: 1

Year: 2008

High resolution preparation of monocyte-derived macrophages (MDM) protein fractions for clinical proteomics

Volume: 7

Issue: 1

Year: 2009

Glycoproteomic analysis of two mouse mammary cell lines during transforming growth factor (TGF)-β induced epithelial to mesenchymal transition

Volume: 7

Issue: 1

Year: 2009

GO Explorer: A gene-ontology tool to aid in the interpretation of shotgun proteomics data

Volume: 7

Issue: 1

Year: 2009

Histoplasma capsulatum proteome response to decreased iron availability

Volume: 6

Issue: 1

Year: 2008

In-depth, high-accuracy proteomics of sea urchin tooth organic matrix

Author(s): Mann Karlheinz | Poustka Albert | Mann Matthias

Volume: 6

Issue: 1

Year: 2008

Dramatic down-regulation of oxidoreductases in human hepatocellular carcinoma hepG2 cells: proteomics and gene ontology unveiling new frontiers in cancer enzymology

Author(s): Ngoka Lambert

Volume: 6

Issue: 1

Year: 2008

A proteomic approach identified growth hormone-dependent nutrition markers in children with idiopathic short stature

Volume: 6

Issue: 1

Year: 2008

High throughput protein-protein interaction data: clues for the architecture of protein complexes

Author(s): Krycer James | Pang Chi | Wilkins Marc

Volume: 6

Issue: 1

Year: 2008

A study on the differential protein profiles in liver cells of heat stress rats with and without turpentine treatment

Volume: 7

Issue: 1

Year: 2009

Sample prep for proteomics of breast cancer: proteomics and gene ontology reveal dramatic differences in protein solubilization preferences of radioimmunoprecipitation assay and urea lysis buffers

Author(s): Ngoka Lambert

Volume: 6

Issue: 1

Year: 2008

SELDI-TOF-MS determination of hepcidin in clinical samples using stable isotope labelled hepcidin as an internal standard

Volume: 6

Issue: 1

Year: 2008

The identification of disease-induced biomarkers in the urine of BSE infected cattle

Volume: 6

Issue: 1

Year: 2008

Trypanosoma cruzi alkaline 2-DE: Optimization and application to comparative proteome analysis of flagellate life stages

Volume: 6

Issue: 1

Year: 2008

Patients with ovarian carcinoma excrete different altered levels of urine CD59, kininogen-1 and fragments of inter-alpha-trypsin inhibitor heavy chain H4 and albumin

Author(s): Abdullah-Soheimi Siti | Lim Boon-Kiong | Hashim Onn | Shuib Adawiyah

Volume: 8

Issue: 1

Year: 2010

Proteomic profiling of proteins associated with the rejuvenation of Sequoia sempervirens (D. Don) Endl

Volume: 8

Issue: 1

Year: 2010

Down-regulation of phosphoglucomutase 3 mediates sulforaphane-induced cell death in LNCaP prostate cancer cells

Volume: 8

Issue: 1

Year: 2010

Stable isotope shifted matrices enable the use of low mass ion precursor scanning for targeted metabolite identification

Author(s): Reilly Charles | Ramarathinam Sri | Williamson Nicholas | Purcell Anthony

Volume: 9

Issue: 1

Year: 2011

Highlights on the capacities of "Gel-based" proteomics

Author(s): Chevalier François

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of PBMCs: characterization of potential HIV-associated proteins

Volume: 8

Issue: 1

Year: 2010

Understanding the molecular basis of plant growth promotional effect of Pseudomonas fluorescens on rice through protein profiling

Volume: 7

Issue: 1

Year: 2009

Transchromosomic cell model of Down syndrome shows aberrant migration, adhesion and proteome response to extracellular matrix

Volume: 7

Issue: 1

Year: 2009

Proteins altered by elevated levels of palmitate or glucose implicated in impaired glucose-stimulated insulin secretion

Author(s): Sol E-ri | Hovsepyan Meri | Bergsten Peter

Volume: 7

Issue: 1

Year: 2009

Development of reverse phase protein microarrays for the validation of clusterin, a mid-abundant blood biomarker

Author(s): Aguilar-Mahecha Adriana | Cantin Christiane | O'Connor-McCourt Maureen | Nantel Andre | Basik Mark

Volume: 7

Issue: 1

Year: 2009

Pooling serum samples may lead to loss of potential biomarkers in SELDI-ToF MS proteomic profiling

Author(s): Sadiq S Tariq | Agranoff Dan

Volume: 6

Issue: 1

Year: 2008

Label-free detection of biomolecular interactions in real time with a nano-porous silicon-based detection method

Author(s): Latterich Martin | Corbeil Jacques

Volume: 6

Issue: 1

Year: 2008

Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation

Author(s): Ernoult Emilie | Gamelin Erick | Guette Catherine

Volume: 6

Issue: 1

Year: 2008

A simple and reliable protocol for mouse serum proteome profiling studies by use of two-dimensional electrophoresis and MALDI TOF/TOF mass spectrometry

Author(s): Ritorto Maria | Borlak Jürgen

Volume: 6

Issue: 1

Year: 2008

Multidimensional protein fractionation using ProteomeLab PF 2D™ for profiling amyotrophic lateral sclerosis immunity: A preliminary report

Volume: 6

Issue: 1

Year: 2008

Proteomic analysis of the EhV-86 virion

Author(s): Allen Michael | Howard Julie | Lilley Kathryn | Wilson William

Volume: 6

Issue: 1

Year: 2008

Proteomic profiling of endorepellin angiostatic activity on human endothelial cells

Author(s): Zoeller Jason | Iozzo Renato

Volume: 6

Issue: 1

Year: 2008

Surface antigens and potential virulence factors from parasites detected by comparative genomics of perfect amino acid repeats

Author(s): Fankhauser Niklaus | Nguyen-Ha Tien-Minh | Adler Joël | Mäser Pascal

Volume: 5

Issue: 1

Year: 2007

SELDI-TOF mass spectrometry of High-Density Lipoprotein

Author(s): Levels Johannes | Bleijlevens Boris | Rezaee Farhad | Aerts Johannes | Meijers Joost

Volume: 5

Issue: 1

Year: 2007

Comparative proteomics reveal characteristics of life-history transitions in a social insect

Author(s): Wolschin Florian | Amdam Gro

Volume: 5

Issue: 1

Year: 2007

Identification of differentially regulated proteins in a patient with Leber's Congenital Amaurosis – a proteomic study

Author(s): Vorum Henrik | Østergaard Morten | Rice Greg | Honoré Bent | Bek Toke

Volume: 5

Issue: 1

Year: 2007

Effect of long-term exposure of SH-SY5Y cells to morphine: a whole cell proteomic analysis

Volume: 4

Issue: 1

Year: 2006

Interest of major serum protein removal for Surface-Enhanced Laser Desorption/Ionization – Time Of Flight (SELDI-TOF) proteomic blood profiling

Author(s): Roche Stéphane | Tiers Laurent | Provansal Monique | Piva Marie-Thérèse | Lehmann Sylvain

Volume: 4

Issue: 1

Year: 2006

Analytical model of peptide mass cluster centres with applications

Volume: 4

Issue: 1

Year: 2006

Phosphoprotein analysis: from proteins to proteomes

Author(s): Delom Frédéric | Chevet Eric

Volume: 4

Issue: 1

Year: 2006

Two-dimensional gel proteome reference map of blood monocytes

Volume: 4

Issue: 1

Year: 2006

An ELISA-based procedure for assaying proteins in digests of human leukocytes and cell lines, using specifically selected peptides and appropriate antibodies

Volume: 4

Issue: 1

Year: 2006

Identification of differentially expressed proteins in spontaneous thymic lymphomas from knockout mice with deletion of p53

Author(s): Honoré Bent | Buus Søren | Claësson Mogens

Volume: 6

Issue: 1

Year: 2008

Development of pan-specific antibody against trimethyllysine for protein research

Volume: 6

Issue: 1

Year: 2008

A method for improving SELDI-TOF mass spectrometry data quality

Author(s): Whistler Toni | Rollin Dominique | Vernon Suzanne

Volume: 5

Issue: 1

Year: 2007

An informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQTM

Volume: 5

Issue: 1

Year: 2007

Estimating probabilities of peptide database identifications to LC-FTICR-MS observations

Author(s): Anderson Kevin | Monroe Matthew | Daly Don

Volume: 4

Issue: 1

Year: 2006

Protein cleavage strategies for an improved analysis of the membrane proteome

Author(s): Fischer Frank | Poetsch Ansgar

Volume: 4

Issue: 1

Year: 2006

Optimization and evaluation of surface-enhanced laser-desorption/ionization time-of-flight mass spectrometry for protein profiling of cerebrospinal fluid

Author(s): Guerreiro Nelson | Gomez-Mancilla Baltazar | Charmont Stéphane

Volume: 4

Issue: 1

Year: 2006

Proteins pattern alteration in AZT-treated K562 cells detected by two-dimensional gel electrophoresis and peptide mass fingerprinting

Volume: 4

Issue: 1

Year: 2006

Cognate peptide-receptor ligand mapping by directed phage display

Author(s): Stratmann Thomas | Kang Angray

Volume: 3

Issue: 1

Year: 2005

Human neuroglobin protein in cerebrospinal fluid

Author(s): Casado Begona | Pannell Lewis | Whalen Gail | Clauw Daniel | Baraniuk James

Volume: 3

Issue: 1

Year: 2005

Development and standardization of multiplexed antibody microarrays for use in quantitative proteomics

Volume: 2

Issue: 1

Year: 2004

Protein expression profiling arrays: tools for the multiplexed high-throughput analysis of proteins

Author(s): Sydor Jens | Nock Steffen

Volume: 1

Issue: 1

Year: 2003

Enhanced detergent extraction for analysis of membrane proteomes by two-dimensional gel electrophoresis

Author(s): Churchward Matthew | Butt R Hussain | Lang John | Hsu Kimberly | Coorssen Jens

Volume: 3

Issue: 1

Year: 2005

Peptides identify multiple hotspots within the ligand binding domain of the TNF receptor 2

Volume: 1

Issue: 1

Year: 2003

Proteome changes in platelets activated by arachidonic acid, collagen, and thrombin

Volume: 8

Issue: 1

Year: 2010

Clinical application for the preservation of phospho-proteins through in-situ tissue stabilization

Volume: 8

Issue: 1

Year: 2010

Online monitoring of immunoaffinity-based depletion of high-abundance blood proteins by UV spectrophotometry using enhanced green fluorescence protein and FITC-labeled human serum albumin

Volume: 8

Issue: 1

Year: 2010

Changes in mouse whole saliva soluble proteome induced by tannin-enriched diet

Volume: 8

Issue: 1

Year: 2010

In-depth analysis of the chicken egg white proteome using an LTQ Orbitrap Velos

Author(s): Mann Karlheinz | Mann Matthias

Volume: 9

Issue: 1

Year: 2011

Chicken model of steroid-induced bone marrow adipogenesis using proteome analysis: a preliminary study

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of purified coronavirus infectious bronchitis virus particles

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis of the fish pathogen Flavobacterium columnare

Author(s): Dumpala Pradeep | Gülsoy Nagihan | Lawrence Mark | Karsi Attila

Volume: 8

Issue: 1

Year: 2010

A method for protein extraction from different subcellular fractions of laticifer latex in Hevea brasiliensis compatible with 2-DE and MS

Volume: 8

Issue: 1

Year: 2010

Proteomic analysis during larval development and metamorphosis of the spionid polychaete Pseudopolydora vexillosa

Author(s): Mok Flora | Thiyagarajan Vengatesen | Qian Pei-Yuan

Volume: 7

Issue: 1

Year: 2009

An update on the mouse liver proteome

Author(s): Gazzana Giuseppe | Borlak Jürgen

Volume: 7

Issue: 1

Year: 2009

A fractionation method to identify qauntitative changes in protein expression mediated by IGF-1 on the proteome of murine C2C12 myoblasts

Author(s): King Charles | Bouic Kathyrn | Friedmann Theodore

Volume: 7

Issue: 1

Year: 2009

Proteome analysis of the hyaluronic acid-producing bacterium, Streptococcus zooepidemicus

Author(s): Marcellin Esteban | Gruber Christian | Archer Colin | Craik David | Nielsen Lars

Volume: 7

Issue: 1

Year: 2009

A comparison of imputation procedures and statistical tests for the analysis of two-dimensional electrophoresis data

Volume: 9

Issue: 1

Year: 2011

Publishing proteomic data

Author(s): Latterich Martin

Volume: 4

Issue: 1

Year: 2006

Molecular systems biology at the crossroads: to know less about more, or to know more about less?

Author(s): Latterich Martin

Volume: 3

Issue: 1

Year: 2005

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