Overview and Utilization of the NCI Thesaurus
Author(s): Gilberto Fragoso | Sherri de Coronado | Margaret Haber | Frank Hartel | Larry Wright
Volume: 5
Issue: 8
Year: 2004




Sequence Ontology Annotation Guide
Author(s): Karen Eilbeck | Suzanna E. Lewis
Volume: 5
Issue: 8
Year: 2004




Standardization Initiatives in the (eco)toxicogenomics Domain: A Review
Author(s): Susanna Assunta Sansone | Norman Morrison | Philippe Rocca-Serra | Jennifer Fostel
Volume: 5
Issue: 8
Year: 2004




Standards and Ontologies for Functional Genomics 2
Author(s): Midori A. Harris | Helen Parkinson
Volume: 5
Issue: 8
Year: 2004




A Special Section of Reviews From the 2nd Conference on Standards and Ontologies for Functional Genomics (SOFG)
Volume: 5
Issue: 8
Year: 2004



Som-Based Class Discovery Exploring the ICA-Reduced Features of Microarray Expression Profiles
Author(s): Andrei Dragomir | Seferina Mavroudi | Anastasios Bezerianos
Volume: 5
Issue: 8
Year: 2004




Exploring the Foundation of Genomics: A Northern Blot Reference set for the Comparative Analysis of Transcript Profiling Technologies
Author(s): Danielle Kemmer | Margareta Faxén | Emily Hodges | Jonathan Lim | Elena Herzog | Elsebrit Ljungström | Anders Lundmark | Mary K. Olsen | Raf Podowski | Erik L. L. Sonnhammer | Peter Nilsson | Mark Reimers | Boris Lenhard | Steven L. Roberds | Claes Wahlestedt | Christer Höög | Pankaj Agarwal | Wyeth W. Wasserman
Volume: 5
Issue: 8
Year: 2004




Maternally and Paternally Silenced Imprinted Genes Differ in Their Intron Content
Author(s): Marie E. Fahey | Walter Mills | Desmond G. Higgins | Tom Moore
Volume: 5
Issue: 8
Year: 2004




Overview and Utilization of the NCI Thesaurus
Author(s): Gilberto Fragoso | Sherri de Coronado | Margaret Haber | Frank Hartel | Larry Wright
Volume: 5
Issue: 8
Year: 2006




Som-Based Class Discovery Exploring the ICA-Reduced Features of Microarray Expression Profiles
Author(s): Andrei Dragomir | Seferina Mavroudi | Anastasios Bezerianos
Volume: 5
Issue: 8
Year: 2006




Exploring the Foundation of Genomics: A Northern Blot Reference set for the Comparative Analysis of Transcript Profiling Technologies
Author(s): Danielle Kemmer | Margareta Faxén | Emily Hodges | Jonathan Lim | Elena Herzog | Elsebrit Ljungström | Anders Lundmark | Mary K. Olsen | Raf Podowski | Erik L. L. Sonnhammer | Peter Nilsson | Mark Reimers | Boris Lenhard | Steven L. Roberds | Claes Wahlestedt | Christer Höög | Pankaj Agarwal | Wyeth W. Wasserman
Volume: 5
Issue: 8
Year: 2006




Maternally and Paternally Silenced Imprinted Genes Differ in Their Intron Content
Author(s): Marie E. Fahey | Walter Mills | Desmond G. Higgins | Tom Moore
Volume: 5
Issue: 8
Year: 2006




Sequence Ontology Annotation Guide
Author(s): Karen Eilbeck | Suzanna E. Lewis
Volume: 5
Issue: 8
Year: 2006




Standardization Initiatives in the (eco)toxicogenomics Domain: A Review
Author(s): Susanna Assunta Sansone | Norman Morrison | Philippe Rocca-Serra | Jennifer Fostel
Volume: 5
Issue: 8
Year: 2006




Standards and Ontologies for Functional Genomics 2
Author(s): Midori A. Harris | Helen Parkinson
Volume: 5
Issue: 8
Year: 2006




A Special Section of Reviews From the 2nd Conference on Standards and Ontologies for Functional Genomics (SOFG)
Volume: 5
Issue: 8
Year: 2004



Towards Inference of a Biochemical Ontology From a Metabolic Database
Author(s): D. C. McShan
Volume: 6
Issue: 7-8
Year: 2005




Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages
Author(s): Pankaj Jaiswal | Shulamit Avraham | Katica Ilic | Elizabeth A. Kellogg | Susan McCouch | Anuradha Pujar | Leonore Reiser | Seung Y. Rhee | Martin M. Sachs | Mary Schaeffer | Lincoln Stein | Peter Stevens | Leszek Vincent | Doreen Ware | Felipe Zapata
Volume: 6
Issue: 7-8
Year: 2005




On Carcinomas and Other Pathological Entities
Author(s): Barry Smith | Anand Kumar | Werner Ceusters | Cornelius Rosse
Volume: 6
Issue: 7-8
Year: 2005




Using Multiple Ontologies to Integrate Complex Biological Data
Author(s): Mary Shimoyama | Victoria Petri | Dean Pasko | Susan Bromberg | Wenhua Wu | Jiali Chen | Nataliya Nenasheva | Anne Kwitek | Simon Twigger | Howard Jacob
Volume: 6
Issue: 7-8
Year: 2005




The 8th Annual Bio-Ontologies Meeting
Author(s): Robert Stevens | Robin McEntire | Phillip Lord | James. A. Butler
Volume: 6
Issue: 7-8
Year: 2005




A Special Section of Articles from the 8th Annual Bio-Ontologies Meeting
Volume: 6
Issue: 7-8
Year: 2005



eGenomics: Cataloguing our Complete Genome Collection
Author(s): Dawn Field | George Garrity | Norman Morrison | Jeremy Selengut | Peter Sterk | Tatiana Tatusova | Nick Thomson
Volume: 6
Issue: 7-8
Year: 2005




eGenomics: Genomes and the Environment
Author(s): Dawn Field | Bela Tiwari | Jason Snape
Volume: 6
Issue: 7-8
Year: 2005




In Silico Analysis for Transcription Factors With Zn(II)2C6 Binuclear Cluster DNA-Binding Domains in Candida albicans
Author(s): Sergi Maicas | Inmaculada Moreno | Almudena Nieto | Micaela Gómez | Rafael Sentandreu | Eulogio Valentín
Volume: 6
Issue: 7-8
Year: 2005




Towards Inference of a Biochemical Ontology From a Metabolic Database
Author(s): D. C. McShan
Volume: 6
Issue: 7-8
Year: 2006




On Carcinomas and Other Pathological Entities
Author(s): Barry Smith | Anand Kumar | Werner Ceusters | Cornelius Rosse
Volume: 6
Issue: 7-8
Year: 2006




Using Multiple Ontologies to Integrate Complex Biological Data
Author(s): Mary Shimoyama | Victoria Petri | Dean Pasko | Susan Bromberg | Wenhua Wu | Jiali Chen | Nataliya Nenasheva | Anne Kwitek | Simon Twigger | Howard Jacob
Volume: 6
Issue: 7-8
Year: 2006




In Silico Analysis for Transcription Factors With Zn(II)2C6 Binuclear Cluster DNA-Binding Domains in Candida albicans
Author(s): Sergi Maicas | Inmaculada Moreno | Almudena Nieto | Micaela Gómez | Rafael Sentandreu | Eulogio Valentín
Volume: 6
Issue: 7-8
Year: 2006




Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages
Author(s): Pankaj Jaiswal | Shulamit Avraham | Katica Ilic | Elizabeth A. Kellogg | Susan McCouch | Anuradha Pujar | Leonore Reiser | Seung Y. Rhee | Martin M. Sachs | Mary Schaeffer | Lincoln Stein | Peter Stevens | Leszek Vincent | Doreen Ware | Felipe Zapata
Volume: 6
Issue: 7-8
Year: 2006




The 8th Annual Bio-Ontologies Meeting
Author(s): Robert Stevens | Robin McEntire | Phillip Lord | James. A. Butler
Volume: 6
Issue: 7-8
Year: 2006




A Special Section of Articles From the 8thAnnual Bio-Ontologies Meeting
Volume: 6
Issue: 7-8
Year: 2005



eGenomics: Cataloguing our Complete Genome Collection
Author(s): Dawn Field | George Garrity | Norman Morrison | Jeremy Selengut | Peter Sterk | Tatiana Tatusova | Nick Thomson
Volume: 6
Issue: 7-8
Year: 2006




eGenomics: Genomes and the Environment
Author(s): Dawn Field | Bela Tiwari | Jason Snape
Volume: 6
Issue: 7-8
Year: 2006




Ontologies for the Description of Mouse Phenotypes
Author(s): G. V. Gkoutos | E. C. J. Green | A.-M. Mallon | A. Blake | S. Greenaway | J. M. Hancock | D. Davidson
Volume: 5
Issue: 6-7
Year: 2004




Ontology for Genome Comparison and Genomic Rearrangements
Author(s): Keith Flanagan | Robert Stevens | Matthew Pocock | Pete Lee | Anil Wipat
Volume: 5
Issue: 6-7
Year: 2004




The Molecule Role Ontology: An Ontology for Annotation of Signal Transduction Pathway Molecules in the Scientific Literature
Author(s): Satoko Yamamoto | Takao Asanuma | Toshihisa Takagi | Ken Ichiro Fukuda
Volume: 5
Issue: 6-7
Year: 2004




The SOFG Anatomy Entry List (SAEL): An Annotation Tool for Functional Genomics Data
Author(s): Helen Parkinson | Stuart Aitken | Richard A. Baldock | Jonathan B. L. Bard | Albert Burger | Terry F. Hayamizu | Alan Rector | Martin Ringwald | Jeremy Rogers | Cornelius Rosse | Christian J. Stoeckert | Duncan Davidson
Volume: 5
Issue: 6-7
Year: 2004




Obol: Integrating Language and Meaning in Bio-Ontologies
Author(s): Christopher J. Mungall
Volume: 5
Issue: 6-7
Year: 2004




Biomedical Informatics and Granularity
Author(s): Anand Kumar | Barry Smith | Daniel D. Novotny
Volume: 5
Issue: 6-7
Year: 2004




The Seventh Annual Bio-Ontologies Meeting Moat House Hotel, Glasgow, 30 July 2004
Author(s): Phillip Lord | Robert Stevens
Volume: 5
Issue: 6-7
Year: 2004




A Special Section of Articles From the 7thAnnual Bio-Ontologies Meeting “Ontologies and Bio-Images”
Volume: 5
Issue: 6-7
Year: 2004



Meeting Report: The Institute for Genomic Research/Wellcome Trust Conference: Genomes 2004 14–17 April 2004, the Wellcome Trust Conference Centre, The Wellcome Trust Genome Campus, Hinxton, Cambridge, Uk
Author(s): Jo Wixon
Volume: 5
Issue: 6-7
Year: 2004




Workshop—Predicting the Structure of Biological Molecules
Author(s): Damian Counsell
Volume: 5
Issue: 6-7
Year: 2004




Navigating Public Microarray Databases
Author(s): Christopher J. Penkett | Jürg Bähler
Volume: 5
Issue: 6-7
Year: 2004




Identification of a Core Set of Genes That Signifies Pathways Underlying Cardiac Hypertrophy
Author(s): Claes C. Strøm | Mogens Kruhøffer | Steen Knudsen | Frank Stensgaard-Hansen | Thomas E. N. Jonassen | Torben F. Ørntoft | Stig Haunsø | Søren P. Sheikh
Volume: 5
Issue: 6-7
Year: 2004




The SOFG Anatomy Entry List (SAEL): An Annotation Tool for Functional Genomics Data
Author(s): Helen Parkinson | Stuart Aitken | Richard A. Baldock | Jonathan B. L. Bard | Albert Burger | Terry F. Hayamizu | Alan Rector | Martin Ringwald | Jeremy Rogers | Cornelius Rosse | Christian J. Stoeckert | Duncan Davidson
Volume: 5
Issue: 6-7
Year: 2006




Obol: Integrating Language and Meaning in Bio-Ontologies
Author(s): Christopher J. Mungall
Volume: 5
Issue: 6-7
Year: 2006




The Seventh Annual Bio-Ontologies Meeting Moat House Hotel, Glasgow, 30 July 2004
Author(s): Phillip Lord | Robert Stevens
Volume: 5
Issue: 6-7
Year: 2006




Meeting Report: The Institute for Genomic Research/Wellcome Trust Conference: Genomes 2004 14–17 April 2004, the Wellcome Trust Conference Centre, The Wellcome Trust Genome Campus, Hinxton, Cambridge, Uk
Author(s): Jo Wixon
Volume: 5
Issue: 6-7
Year: 2004




Identification of a Core Set of Genes That Signifies Pathways Underlying Cardiac Hypertrophy
Author(s): Claes C. Strøm | Mogens Kruhøffer | Steen Knudsen | Frank Stensgaard-Hansen | Thomas E. N. Jonassen | Torben F. Ørntoft | Stig Haunsø | Søren P. Sheikh
Volume: 5
Issue: 6-7
Year: 2006




Biomedical Informatics and Granularity
Author(s): Anand Kumar | Barry Smith | Daniel D. Novotny
Volume: 5
Issue: 6-7
Year: 2006




Workshop—Predicting the Structure of Biological Molecules
Author(s): Damian Counsell
Volume: 5
Issue: 6-7
Year: 2006




Ontologies for the Description of Mouse Phenotypes
Author(s): G. V. Gkoutos | E. C. J. Green | A.-M. Mallon | A. Blake | S. Greenaway | J. M. Hancock | D. Davidson
Volume: 5
Issue: 6-7
Year: 2006




Ontology for Genome Comparison and Genomic Rearrangements
Author(s): Keith Flanagan | Robert Stevens | Matthew Pocock | Pete Lee | Anil Wipat
Volume: 5
Issue: 6-7
Year: 2006




The Molecule Role Ontology: An Ontology for Annotation of Signal Transduction Pathway Molecules in the Scientific Literature
Author(s): Satoko Yamamoto | Takao Asanuma | Toshihisa Takagi | Ken Ichiro Fukuda
Volume: 5
Issue: 6-7
Year: 2006




Navigating Public Microarray Databases
Author(s): Christopher J. Penkett | Jürg Bähler
Volume: 5
Issue: 6-7
Year: 2006




A Special Section of Articles From the 7thAnnual Bio-Ontologies Meeting “Ontologies and Bio-Imagesâ€Â
Volume: 5
Issue: 6-7
Year: 2004



Critical Assessment of Information Extraction Systems in Biology
Author(s): Christian Blaschke | Lynette Hirschman | Alexander Yeh | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2003




ISMB 2003 Text Mining SIG Meeting Report
Author(s): Christian Blaschke | Alexander Yeh | Lynette Hirschman | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2003




ISMB 2003 Bio-ontologies SIG and Sixth Annual Bio-ontologies Meeting Report
Author(s): Phillip Lord | Robert Stevens
Volume: 4
Issue: 6
Year: 2003




ISMB 2003 BioPathways SIG and 5th BioPathways Meeting
Author(s): Vincent Schachter | Aviv Regev
Volume: 4
Issue: 6
Year: 2003




11th Intelligent Systems for Molecular Biology 2003 (ISMB2003)
Author(s): Catherine A. Abbott
Volume: 4
Issue: 6
Year: 2003




Segmental Trisomy of Mouse Chromosome 17: Introducing anAlternative Model of Down’s Syndrome
Author(s): Jiri Forejt | Tomáš Vacík | Soňa Gregorová
Volume: 4
Issue: 6
Year: 2003




The Characteristics of Human Genes: Analysis of Human Chromosome 22
Author(s): Ian Dunham | David M. Beare | John E. Collins
Volume: 4
Issue: 6
Year: 2003




Biobanks for Genomics and Genomics for Biobanks
Author(s): Anne Cambon-Thomsen | Pascal Ducournau | Pierre-Antoine Gourraud | David Pontille
Volume: 4
Issue: 6
Year: 2003




Structure and Sequence of the Human Fast Skeletal Troponin T(TNNT3) Gene: Insight Into the Evolution of the Gene andthe Origin of the Developmentally Regulated Isoforms
Author(s): Raymund Stefancsik | Jeffrey D. Randall | Chengjian Mao | Satyapriya Sarkar
Volume: 4
Issue: 6
Year: 2003




Steady-State Analysis of Genetic Regulatory Networks Modelled byProbabilistic Boolean Networks
Author(s): Ilya Shmulevich | Ilya Gluhovsky | Ronaldo F. Hashimoto | Edward R. Dougherty | Wei Zhang
Volume: 4
Issue: 6
Year: 2003




A Molecular Phylogenomic Analysis of the ILR1-Like Family of IAAAmidohydrolase Genes
Author(s): James J. Campanella | Daniel Larko | John Smalley
Volume: 4
Issue: 6
Year: 2003




Gene Expression Profiling on Global cDNA Arrays Gives HintsConcerning Potential Signal Transduction Pathways Involved inCardiac Fibrosis of Renal Failure
Author(s): Kerstin Amann | Heidrun Ridinger | Christiane Rutenberg | Eberhard Ritz | Gerhard Mall | Christian Maercker
Volume: 4
Issue: 6
Year: 2003




Meeting Highlights: International Summer School, ‘From Genome to Life’
Author(s): Jo Wixon
Volume: 3
Issue: 6
Year: 2002




Flowering Buds of Globular Proteins: Transpiring Simplicity of Protein Organization
Author(s): Igor N. Berezovsky | Edward N. Trifonov
Volume: 3
Issue: 6
Year: 2002




The Annotation of RNA Motifs
Author(s): Neocles B. Leontis | Eric Westhof
Volume: 3
Issue: 6
Year: 2002




Heterologous Expression and Purification Systems for Structural Proteomics of Mammalian Membrane Proteins
Author(s): Isabelle Mus-Veteau
Volume: 3
Issue: 6
Year: 2002




The Evolution of Light Stress Proteins in Photosynthetic Organisms
Author(s): Mounia Heddad | Iwona Adamska
Volume: 3
Issue: 6
Year: 2002




Learning about Gene Regulatory Networks from Gene Deletion Experiments
Author(s): Thomas Schlitt | Alvis Brazma
Volume: 3
Issue: 6
Year: 2002




Endogenous Retroviruses and Human Evolution
Author(s): Konstantin Khodosevich | Yuri Lebedev | Eugene Sverdlov
Volume: 3
Issue: 6
Year: 2002




Correct Assignment of Homology is Crucial When Genomics Meets Molecular Evolution
Author(s): Mohamed Zouine | Quentin Sculo | Bernard Labedan
Volume: 3
Issue: 6
Year: 2002




Meeting Review: Intelligent Systems for Molecular Biology 2002 (ISMB02)
Author(s): K. Cara Woodwark
Volume: 3
Issue: 6
Year: 2002




Proteome Analysis of the Plasma Membrane of Mycobacterium tuberculosis
Author(s): Sudhir Sinha | Shalini Arora | K. Kosalai | Abdelkader Namane | Alex S. Pym | Stewart T. Cole
Volume: 3
Issue: 6
Year: 2002




Meeting Highlights: 15th International Mouse Genome Conference
Author(s): Jo Wixon
Volume: 2
Issue: 6
Year: 2001




Meeting Highlights: Joint Cold Spring Harbor Laboratory and Wellcome Trust Conference – Genome Informatics
Author(s): Jo Wixon | Jennifer Ashurst | Jo Dicks
Volume: 2
Issue: 6
Year: 2001




C2M: Configurable Chemical Middleware
Author(s): Paul van der Vet | Hans E. Roosendaal | Peter A. T. M. Geurts
Volume: 2
Issue: 6
Year: 2001




The Low Down on e-Science and Grids for Biology
Author(s): Carole Goble
Volume: 2
Issue: 6
Year: 2001




The Interaction between Endopolygalacturonase from Fusarium moniliforme and PGIP from Phaseolus vulgaris Studied by Surface Plasmon Resonance and Mass Spectrometry
Author(s): Benedetta Mattei | Felice Cervone | Peter Roepstorff
Volume: 2
Issue: 6
Year: 2001




The Interaction Between Endopolygalacturonase From Fusarium Moniliforme and PGIP from Phaseolus Vulgaris Studied by Surface Plasmon Resonance and Mass Spectrometry
Author(s): Benedetta Mattei | Felice Cervone | Peter Roepstorff
Volume: 2
Issue: 6
Year: 2006




The Annotation of RNA Motifs
Author(s): Neocles B. Leontis | Eric Westhof
Volume: 3
Issue: 6
Year: 2006




Heterologous Expression and Purification Systems for Structural Proteomics of Mammalian Membrane Proteins
Author(s): Isabelle Mus-Veteau
Volume: 3
Issue: 6
Year: 2006




The Evolution of Light Stress Proteins in Photosynthetic Organisms
Author(s): Mounia Heddad | Iwona Adamska
Volume: 3
Issue: 6
Year: 2006




Endogenous Retroviruses and Human Evolution
Author(s): Konstantin Khodosevich | Yuri Lebedev | Eugene Sverdlov
Volume: 3
Issue: 6
Year: 2006




Proteome Analysis of the Plasma Membrane of Mycobacterium Tuberculosis
Author(s): Sudhir Sinha | Shalini Arora | K. Kosalai | Abdelkader Namane | Alex S. Pym | Stewart T. Cole
Volume: 3
Issue: 6
Year: 2006




Critical Assessment of Information Extraction Systems in Biology
Author(s): Christian Blaschke | Lynette Hirschman | Alexander Yeh | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2006




ISMB 2003 Bio-ontologies SIG and Sixth Annual Bio-ontologies Meeting Report
Author(s): Phillip Lord | Robert Stevens
Volume: 4
Issue: 6
Year: 2006




Biobanks for Genomics and Genomics for Biobanks
Author(s): Anne Cambon-Thomsen | Pascal Ducournau | Pierre-Antoine Gourraud | David Pontille
Volume: 4
Issue: 6
Year: 2006




Structure and Sequence of the Human Fast Skeletal Troponin T (TNNT3) Gene: Insight Into the Evolution of the Gene and the Origin of the Developmentally Regulated Isoforms
Author(s): Raymund Stefancsik | Jeffrey D. Randall | Chengjian Mao | Satyapriya Sarkar
Volume: 4
Issue: 6
Year: 2006




Steady-State Analysis of Genetic Regulatory Networks Modelled by Probabilistic Boolean Networks
Author(s): Ilya Shmulevich | Ilya Gluhovsky | Ronaldo F. Hashimoto | Edward R. Dougherty | Wei Zhang
Volume: 4
Issue: 6
Year: 2006




A Molecular Phylogenomic Analysis of the ILR1-Like Family of IAA Amidohydrolase Genes
Author(s): James J. Campanella | Daniel Larko | John Smalley
Volume: 4
Issue: 6
Year: 2006




Gene Expression Profiling on Global cDNA Arrays Gives Hints Concerning Potential Signal Transduction Pathways Involved in Cardiac Fibrosis of Renal Failure
Author(s): Kerstin Amann | Heidrun Ridinger | Christiane Rutenberg | Eberhard Ritz | Gerhard Mall | Christian Maercker
Volume: 4
Issue: 6
Year: 2006




Meeting Highlights: 15th International Mouse Genome Conference
Author(s): Jo Wixon
Volume: 2
Issue: 6
Year: 2001




Meeting Highlights: Joint Cold Spring Harbor Laboratory and Wellcome Trust Conference – Genome Informatics
Author(s): Jo Wixon | Jennifer Ashurst | Jo Dicks
Volume: 2
Issue: 6
Year: 2006




The Low Down on e-Science and Grids for Biology
Author(s): Carole Goble
Volume: 2
Issue: 6
Year: 2006




Flowering Buds of Globular Proteins: Transpiring Simplicity of Protein Organization
Author(s): Igor N. Berezovsky | Edward N. Trifonov
Volume: 3
Issue: 6
Year: 2006




Learning About Gene Regulatory Networks From Gene Deletion Experiments
Author(s): Thomas Schlitt | Alvis Brazma
Volume: 3
Issue: 6
Year: 2006




Correct Assignment of Homology is Crucial When Genomics Meets Molecular Evolution
Author(s): Mohamed Zouine | Quentin Sculo | Bernard Labedan
Volume: 3
Issue: 6
Year: 2006




Intelligent Systems for Molecular Biology 2002 (ISMB02)
Author(s): K. Cara Woodwark
Volume: 3
Issue: 6
Year: 2006




11th Intelligent Systems for Molecular Biology 2003 (ISMB 2003)
Author(s): Catherine A. Abbott
Volume: 4
Issue: 6
Year: 2006




C2M: Configurable Chemical Middleware
Author(s): Paul van der Vet | Hans E. Roosendaal | Peter A. T. M. Geurts
Volume: 2
Issue: 6
Year: 2006




International Summer School, ‘ From Genome to Life’
Author(s): Jo Wixon
Volume: 3
Issue: 6
Year: 2006




Segmental Trisomy of Mouse Chromosome 17: Introducing an Alternative Model of Down’s Syndrome
Author(s): Jiri Forejt | Tomáš Vacík | Soňa Gregorová
Volume: 4
Issue: 6
Year: 2006




ISMB 2003 Text Mining SIG Meeting Report
Author(s): Christian Blaschke | Alexander Yeh | Lynette Hirschman | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2006




ISMB 2003 BioPathways SIG and 5th BioPathways Meeting
Author(s): Vincent Schachter | Aviv Regev
Volume: 4
Issue: 6
Year: 2006




The Characteristics of Human Genes: Analysis of Human Chromosome 22
Author(s): Ian Dunham | David M. Beare | John E. Collins
Volume: 4
Issue: 6
Year: 2006




Poultry Genomics Puts Meat on the Table
Author(s): Ed Smith | Olivier Pourquié | Dave Burt
Volume: 6
Issue: 5-6
Year: 2005




ESF Workshop on ‘Sustainability and Governance of Web and GRID Resources in Functional Genomics’
Author(s): Paul van der Vet | Theo Huibers | Pierre-Alain Binz | Martin Hofmann
Volume: 6
Issue: 5-6
Year: 2005




Characterization of Expressed Sequence Tags From a Gallus gallus Pineal Gland cDNA Library
Author(s): Stefanie Hartman | Greg Touchton | Jessica Wynn | Tuoyu Geng | Nelson W. Chong | Ed Smith
Volume: 6
Issue: 5-6
Year: 2005




Identification and Comparative Analysis of the Peptidyl-Prolyl cis/trans Isomerase Repertoires of H. sapiens, D. melanogaster, C. elegans, S. cerevisiae and Sz. pombe
Author(s): Trevor J. Pemberton | John E. Kay
Volume: 6
Issue: 5-6
Year: 2005




Atypical CTSK Transcripts and ARNT Transcription Read-Through into CTSK
Author(s): Fabienne S. Giraudeau | Jean-Philippe Walhin | Paul R. Murdock | Nigel K. Spurr | Ian C. Gray
Volume: 6
Issue: 5-6
Year: 2005




Identification and Comparative Analysis of the Peptidyl-Prolyl cis/trans Isomerase Repertoires of H. sapiens, D. melanogaster, C. elegans, S. cerevisiae and Sz. pombe
Author(s): Trevor J. Pemberton | John E. Kay
Volume: 6
Issue: 5-6
Year: 2006




Atypical CTSK Transcripts and ARNT Transcription Read-Through Into CTSK
Author(s): Fabienne S. Giraudeau | Jean-Philippe Walhin | Paul R. Murdock | Nigel K. Spurr | Ian C. Gray
Volume: 6
Issue: 5-6
Year: 2006




Characterization of Expressed Sequence Tags From a Gallus gallus Pineal Gland cDNA Library
Author(s): Stefanie Hartman | Greg Touchton | Jessica Wynn | Tuoyu Geng | Nelson W. Chong | Ed Smith
Volume: 6
Issue: 5-6
Year: 2006




Poultry Genomics Puts Meat on the Table
Author(s): Ed Smith | Olivier Pourquié | Dave Burt
Volume: 6
Issue: 5-6
Year: 2006




ESF Workshop on ‘Sustainability and Governance of Web and GRID Resources in Functional Genomics’
Author(s): Paul van der Vet | Theo Huibers | Pierre-Alain Binz | Martin Hofmann
Volume: 6
Issue: 5-6
Year: 2006




A Case Study on Choosing Normalization Methods and Test Statistics for Two-Channel Microarray Data
Author(s): Yang Xie | Kyeong S. Jeong | Wei Pan | Arkady Khodursky | Bradley P. Carlin
Volume: 5
Issue: 5
Year: 2004




Genome-Wide Analysis of the Effects of Heat Shock on a Saccharomyces cerevisiae Mutant With a Constitutively Activated cAMP-Dependent Pathway
Author(s): Dawn L. Jones | June Petty | David C. Hoyle | Andrew Hayes | Stephen G. Oliver | Isabel Riba-Garcia | Simon J. Gaskell | Lubomira Stateva
Volume: 5
Issue: 5
Year: 2004




Comparative Analysis of the Testis and Ovary Transcriptomes in Zebrafish by Combining Experimental and Computational Tools
Author(s): Yang Li | Jer Ming Chia | Richard Bartfai | Alan Christoffels | Gen Hua Yue | Ke Ding | Mei Yin Ho | James A. Hill | Elia Stupka | Laszlo Orban
Volume: 5
Issue: 5
Year: 2004




A critical and Integrated View of the Yeast Interactome
Author(s): Michael Cornell | Norman W. Paton | Stephen G. Oliver
Volume: 5
Issue: 5
Year: 2004




ESF Programme on Functional Genomics 1st EuropeanConference: Functional Genomics and Disease 2003
Author(s): Jo Wixon | Joan Marsh
Volume: 4
Issue: 5
Year: 2003




Fishing With (Proto)Net—A Principled Approach toProtein Target Selection
Author(s): Michal Linial
Volume: 4
Issue: 5
Year: 2003




The Journey to smORFland
Author(s): Wagied Davids | Hans-Henrik Fuxelius | Siv G. E. Andersson
Volume: 4
Issue: 5
Year: 2003




Padlock and Proximity Probes for In Situ andArray-Based Analyses: Tools for the Post-Genomic Era
Author(s): Ulf Landegren | Fredrik Dahl | Mats Nilsson | Simon Fredriksson | Johan Banér | Mats Gullberg | Jonas Jarvius | Sigrun Gustafsdottir | Ola Söderberg | Olle Ericsson | Johan Stenberg | Edith Schallmeiner
Volume: 4
Issue: 5
Year: 2003




Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses
Author(s): Andrea Bauer | Boris Beckmann | Christian Busold | Ole Brandt | Wlad Kusnezow | Janne Pullat | Verena Aign | Kurt Fellenberg | Robert Fleischer | Anette Jacob | Marcus Frohme | Jörg D. Hoheisel
Volume: 4
Issue: 5
Year: 2003




Meeting Highlights: Genome Informatics
Author(s): Jo Wixon | Jennifer Ashurst
Volume: 4
Issue: 5
Year: 2003




Worldwide Genomic Resources for Non-Model FishSpecies
Author(s): Melody S. Clark | Douglas L. Crawford | Andrew Cossins
Volume: 4
Issue: 5
Year: 2003




Proposal for a Standard Representation of Two-Dimensional GelElectrophoresis Data
Author(s): Andrew Jones | Jonathan Wastling | Ela Hunt
Volume: 4
Issue: 5
Year: 2003




Proteins Interacting with Caenorhabditis elegans Gα Subunits
Author(s): Edwin Cuppen | Alexander M. van der Linden | Gert Jansen | Ronald H. A. Plasterk
Volume: 4
Issue: 5
Year: 2003




Analysis of Known Bacterial Protein Vaccine Antigens RevealsBiased Physical Properties and Amino Acid Composition
Author(s): Carl Mayers | Melanie Duffield | Sonya Rowe | Julie Miller | Bryan Lingard | Sarah Hayward | Richard W. Titball
Volume: 4
Issue: 5
Year: 2003




Post-Normalization Quality Assessment Visualization of MicroarrayData
Author(s): John McClure | Ernst Wit
Volume: 4
Issue: 5
Year: 2003




The 50th ASMS Conference on Mass Spectrometry and Allied Topics
Author(s): Francesco L. Brancia
Volume: 3
Issue: 5
Year: 2002




CCP11 Group Meeting—Towards the Functional Analysis of Microarrays
Author(s): Clare Sansom
Volume: 3
Issue: 5
Year: 2002




From Genotype to Phenotype: Linking Bioinformatics and Medical Informatics Ontologies
Author(s): Ele Holloway
Volume: 3
Issue: 5
Year: 2002




Meeting Review: ESF Workshop on ‘Impact of Nucleic Acid Chemistry on Gene Function Analysis: Antisense, Aptamers, Ribozymes and RNAi’
Author(s): Kathrin Heermeier | Hans Prydz | Jutta Reinhard-Rupp | Joachim Engels
Volume: 3
Issue: 5
Year: 2002




A Computational Strategy for Protein Function Assignment which Addresses the Multidomain Problem
Author(s): A. J. Pérez | A. Rodríguez | O. Trelles | G. Thode
Volume: 3
Issue: 5
Year: 2002




A Mathematical Model for Suppression Subtractive Hybridization
Author(s): Chetan Gadgil | Anette Rink | Craig Beattie | Wei-Shou Hu
Volume: 3
Issue: 5
Year: 2002




Website Review: Protein-Protein Interactions on the Web
Author(s): Jo Wixon
Volume: 2
Issue: 5
Year: 2001




Meeting Review: The Intelligent Systems in Bioinformatics Conference 2001 (ISMB2001)
Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2001




Meeting Review: The Bioinformatics Open Source Conference 2001 (BOSC 2001)
Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2001




The ESF Programme on Integrated Approaches for Functional Genomics Workshop on ‘Proteomics: Focus on Protein Interactions’
Author(s): Joan Marsh
Volume: 2
Issue: 5
Year: 2001




iSPOT: A Web Tool for the Analysis and Recognition of Protein Domain Specificity
Author(s): Barbara Brannetti | Andreas Zanzoni | Luisa Montecchi-Palazzi | Gianni Cesareni | Manuela Helmer-Citterich
Volume: 2
Issue: 5
Year: 2001




Extracting Information Automatically from Biological Literature
Author(s): Christian Blaschke | Robert Hoffmann | Juan Carlos Oliveros | Alfonso Valencia
Volume: 2
Issue: 5
Year: 2001




Synthetic Peptide and Protein Domain Arrays Prepared by the SPOT Technology
Author(s): Jens Schneider-Mergener
Volume: 2
Issue: 5
Year: 2001




Mapping Protein-Protein Interactions with Combinatorial Peptides
Author(s): Brian K. Kay
Volume: 2
Issue: 5
Year: 2001




How Useful Will Functional Proteomics Data Be?
Author(s): Pierre Legrain
Volume: 2
Issue: 5
Year: 2001




ESF Workshop ‘Proteomics: Focus on Protein Interactions’
Author(s): Gianni Cesareni
Volume: 2
Issue: 5
Year: 2001




A Special Section Including Selected Reviews From the ESF ‘Integrated Approaches for Functional Genomics’ Programme Workshop ‘Proteomics: Focus on Protein Interactions’
Volume: 2
Issue: 5
Year: 2001



Sphingoid Base Metabolism in Yeast: Mapping Gene Expression Patterns Into Qualitative Metabolite Time Course Predictions
Author(s): Tomas Radivoyevitch
Volume: 2
Issue: 5
Year: 2001




Identification of Membrane Proteins in the Hyperthermophilic Archaeon Pyrococcus furiosus Using Proteomics and Prediction Programs
Author(s): James F. Holden | Farris L. Poole II | Sandra L. Tollaksen | Carol S. Giometti | Hanjo Lim | John R. Yates III | Michael W. W. Adams
Volume: 2
Issue: 5
Year: 2001




Sphingoid Base Metabolism in Yeast: Mapping Gene Expression Patterns Into Qualitative Metabolite Time Course Predictions
Author(s): Tomas Radivoyevitch
Volume: 2
Issue: 5
Year: 2006




Identification of Membrane Proteins in the Hyperthermophilic Archaeon Pyrococcus Furiosus Using Proteomics and Prediction Programs
Author(s): James F. Holden | Farris L. Poole II | Sandra L. Tollaksen | Carol S. Giometti | Hanjo Lim | John R. Yates III | Michael W. W. Adams
Volume: 2
Issue: 5
Year: 2006




CCP11 Group Meeting—Towards the Functional Analysis of Microarrays
Author(s): Clare Sansom
Volume: 3
Issue: 5
Year: 2006




A Computational Strategy for Protein Function Assignment Which Addresses the Multidomain Problem
Author(s): A. J. Pérez | A. Rodríguez | O. Trelles | G. Thode
Volume: 3
Issue: 5
Year: 2006




A Mathematical Model for Suppression Subtractive Hybridization
Author(s): Chetan Gadgil | Anette Rink | Craig Beattie | Wei-Shou Hu
Volume: 3
Issue: 5
Year: 2006




Fishing With (Proto)Net—A Principled Approach to Protein Target Selection
Author(s): Michal Linial
Volume: 4
Issue: 5
Year: 2006




Padlock and Proximity Probes for in Situ and Array-Based Analyses: Tools for the Post-Genomic Era
Author(s): Ulf Landegren | Fredrik Dahl | Mats Nilsson | Simon Fredriksson | Johan Banér | Mats Gullberg | Jonas Jarvius | Sigrun Gustafsdottir | Ola Söderberg | Olle Ericsson | Johan Stenberg | Edith Schallmeiner
Volume: 4
Issue: 5
Year: 2006




Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses
Author(s): Andrea Bauer | Boris Beckmann | Christian Busold | Ole Brandt | Wlad Kusnezow | Janne Pullat | Verena Aign | Kurt Fellenberg | Robert Fleischer | Anette Jacob | Marcus Frohme | Jörg D. Hoheisel
Volume: 4
Issue: 5
Year: 2006




Proposal for a Standard Representation of Two-Dimensional Gel Electrophoresis Data
Author(s): Andrew Jones | Jonathan Wastling | Ela Hunt
Volume: 4
Issue: 5
Year: 2006




Proteins Interacting With Caenorhabditis elegans Gα Subunits
Author(s): Edwin Cuppen | Alexander M. van der Linden | Gert Jansen | Ronald H. A. Plasterk
Volume: 4
Issue: 5
Year: 2006




Analysis of Known Bacterial Protein Vaccine Antigens Reveals Biased Physical Properties and Amino Acid Composition
Author(s): Carl Mayers | Melanie Duffield | Sonya Rowe | Julie Miller | Bryan Lingard | Sarah Hayward | Richard W. Titball
Volume: 4
Issue: 5
Year: 2006




A Case Study on Choosing Normalization Methods and Test Statistics for Two-Channel Microarray Data
Author(s): Yang Xie | Kyeong S. Jeong | Wei Pan | Arkady Khodursky | Bradley P. Carlin
Volume: 5
Issue: 5
Year: 2006




Genome-Wide Analysis of the Effects of Heat Shock on a Saccharomyces cerevisiae Mutant With a Constitutively Activated cAMP-Dependent Pathway
Author(s): Dawn L. Jones | June Petty | David C. Hoyle | Andrew Hayes | Stephen G. Oliver | Isabel Riba-Garcia | Simon J. Gaskell | Lubomira Stateva
Volume: 5
Issue: 5
Year: 2006




Comparative Analysis of the Testis and Ovary Transcriptomes in Zebrafish by Combining Experimental and Computational Tools
Author(s): Yang Li | Jer Ming Chia | Richard Bartfai | Alan Christoffels | Gen Hua Yue | Ke Ding | Mei Yin Ho | James A. Hill | Elia Stupka | Laszlo Orban
Volume: 5
Issue: 5
Year: 2006




A critical and Integrated View of the Yeast Interactome
Author(s): Michael Cornell | Norman W. Paton | Stephen G. Oliver
Volume: 5
Issue: 5
Year: 2006




Website Review: Protein-Protein Interactions on the Web
Author(s): Jo Wixon
Volume: 2
Issue: 5
Year: 2001




The ESF Programme on Integrated Approaches for Functional Genomics Workshop on ‘Proteomics: Focus on Protein Interactions’
Author(s): Joan Marsh
Volume: 2
Issue: 5
Year: 2001




iSPOT: A Web Tool for the Analysis and Recognition of Protein Domain Specificity
Author(s): Barbara Brannetti | Andreas Zanzoni | Luisa Montecchi-Palazzi | Gianni Cesareni | Manuela Helmer-Citterich
Volume: 2
Issue: 5
Year: 2006




Extracting Information Automatically From Biological Literature
Author(s): Christian Blaschke | Robert Hoffmann | Juan Carlos Oliveros | Alfonso Valencia
Volume: 2
Issue: 5
Year: 2006




Synthetic Peptide and Protein Domain Arrays Prepared by the SPOT Technology
Author(s): Jens Schneider-Mergener
Volume: 2
Issue: 5
Year: 2006




Mapping Protein-Protein Interactions With Combinatorial Peptides
Author(s): Brian K. Kay
Volume: 2
Issue: 5
Year: 2006




How Useful Will Functional Proteomics Data Be?
Author(s): Pierre Legrain
Volume: 2
Issue: 5
Year: 2006




ESF Workshop ‘Proteomics: Focus on Protein Interactions’
Author(s): Gianni Cesareni
Volume: 2
Issue: 5
Year: 2006




A Special Section Including Selected Reviews From the ESF ‘Integrated Approaches for Functional Genomics’ Programme Workshop ‘Proteomics: Focus on Protein Interactions’
Volume: 2
Issue: 5
Year: 2001



The 50th ASMS Conference on Mass Spectrometry and Allied Topics
Author(s): Francesco L. Brancia
Volume: 3
Issue: 5
Year: 2002




From Genotype to Phenotype: Linking Bioinformatics and Medical Informatics Ontologies
Author(s): Ele Holloway
Volume: 3
Issue: 5
Year: 2006




Meeting Review: ESF Workshop on ‘Impact of Nucleic Acid Chemistry on Gene Function Analysis: Antisense, Aptamers, Ribozymes and RNAi’
Author(s): Kathrin Heermeier | Hans Prydz | Jutta Reinhard-Rupp | Joachim Engels
Volume: 3
Issue: 5
Year: 2006




ESF Programme on Functional Genomics 1st European Conference: Functional Genomics and Disease 2003
Author(s): Jo Wixon | Joan Marsh
Volume: 4
Issue: 5
Year: 2006




Meeting Highlights: Genome Informatics
Author(s): Jo Wixon | Jennifer Ashurst
Volume: 4
Issue: 5
Year: 2006




Post-Normalization Quality Assessment Visualization of Microarray Data
Author(s): John McClure | Ernst Wit
Volume: 4
Issue: 5
Year: 2006




The Journey to smORFland
Author(s): Wagied Davids | Hans-Henrik Fuxelius | Siv G. E. Andersson
Volume: 4
Issue: 5
Year: 2006




Meeting Review: The Intelligent Systems in Bioinformatics Conference 2001 (ISMB2001)
Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2001




Meeting Review: The Bioinformatics Open Source Conference 2001 (BOSC 2001)
Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2006




Worldwide Genomic Resources for Non-Model Fish Species
Author(s): Melody S. Clark | Douglas L. Crawford | Andrew Cossins
Volume: 4
Issue: 5
Year: 2006




Swine Genome Sequencing Consortium (SGSC): A Strategic Roadmap for Sequencing The Pig Genome
Author(s): Lawrence B. Schook | Jonathan E. Beever | Jane Rogers | Sean Humphray | Alan Archibald | Patrick Chardon | Denis Milan | Gary Rohrer | Kellye Eversole
Volume: 6
Issue: 4
Year: 2005




Effect of Stress on Viral–Bacterial Synergy in Bovine Respiratory Disease: Novel Mechanisms to Regulate Inflammation
Author(s): P. D. Hodgson | P. Aich | A. Manuja | K. Hokamp | F. M. Roche | F. S. L. Brinkman | A. Potter | L. A. Babiuk | P. J. Griebel
Volume: 6
Issue: 4
Year: 2005




Proteomic Analysis of Colorectal Cancer: Prefractionation Strategies Using two-Dimensional Free-Flow Electrophoresis
Author(s): Robert L. Moritz | Anita R. Skandarajah | Hong Ji | Richard J. Simpson
Volume: 6
Issue: 4
Year: 2005




Xenogenomics: Genomic Bioprospecting in Indigenous and Exotic Plants Through EST Discovery, cDNA Microarray-Based Expression Profiling and Functional Genomics
Author(s): Ulrik P. John | German C. Spangenberg
Volume: 6
Issue: 4
Year: 2005




A Phylogenomic Study of the Genus Alphavirus Employing Whole Genome Comparison
Author(s): Aimée J. Luers | Sandra D. Adams | John V. Smalley | James J. Campanella
Volume: 6
Issue: 4
Year: 2005




The Cadherin Superfamily in Anopheles gambiae: a Comparative Study With Drosophila melanogaster
Author(s): Catarina Moita | Sérgio Simões | Luís F. Moita | António Jacinto | Pedro Fernandes
Volume: 6
Issue: 4
Year: 2005




A 4 Mb High Resolution BAC Contig on Bovine Chromosome 1q12 and Comparative Analysis With Human Chromosome 21q22
Author(s): Cord Drögemüller | Anne Wöhlke | Tosso Leeb | Ottmar Distl
Volume: 6
Issue: 4
Year: 2005




Design, Implementation and Maintenance of a Model Organism Database for Arabidopsis thaliana
Author(s): Danforth Weems | Neil Miller | Margarita Garcia-Hernandez | Eva Huala | Seung Y. Rhee
Volume: 5
Issue: 4
Year: 2004




Mapping the Gene Ontology Into the Unified Medical Language System
Author(s): Jane Lomax | Alexa T. McCray
Volume: 5
Issue: 4
Year: 2004




Investigation Into the use of C- and N-terminal GFP Fusion Proteins for Subcellular Localization Studies Using Reverse Transfection Microarrays
Author(s): Ella Palmer | Tom Freeman
Volume: 5
Issue: 4
Year: 2004




Evolution and Cellular Function of Monothiol Glutaredoxins: Involvement in Iron-Sulphur Cluster Assembly
Author(s): Felipe Vilella | Rui Alves | María Teresa Rodríguez-Manzaneque | Gemma Bellí | Swarna Swaminathan | Per Sunnerhagen | Enrique Herrero
Volume: 5
Issue: 4
Year: 2004




Comparative Genomic Assessment of Novel Broad-Spectrum Targets for Antibacterial Drugs
Author(s): Thomas A. White | Douglas B. Kell
Volume: 5
Issue: 4
Year: 2004




Microarray Probe Expression Measures, Data Normalization andStatistical Validation
Author(s): Silvia Saviozzi | Raffaele A. Calogero
Volume: 4
Issue: 4
Year: 2003



