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Comparative and Functional Genomics

ISSN: 1531--6912
Publisher: Hindawi Publishing Corporation


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Overview and Utilization of the NCI Thesaurus

Author(s): Gilberto Fragoso | Sherri de Coronado | Margaret Haber | Frank Hartel | Larry Wright
Volume: 5
Issue: 8
Year: 2004
Sequence Ontology Annotation Guide

Author(s): Karen Eilbeck | Suzanna E. Lewis
Volume: 5
Issue: 8
Year: 2004
Standardization Initiatives in the (eco)toxicogenomics Domain: A Review

Author(s): Susanna Assunta Sansone | Norman Morrison | Philippe Rocca-Serra | Jennifer Fostel
Volume: 5
Issue: 8
Year: 2004
The Montagues and the Capulets

Author(s): Carole Goble | Chris Wroe
Volume: 5
Issue: 8
Year: 2004
Standards and Ontologies for Functional Genomics 2

Author(s): Midori A. Harris | Helen Parkinson
Volume: 5
Issue: 8
Year: 2004
Som-Based Class Discovery Exploring the ICA-Reduced Features of Microarray Expression Profiles

Author(s): Andrei Dragomir | Seferina Mavroudi | Anastasios Bezerianos
Volume: 5
Issue: 8
Year: 2004
Exploring the Foundation of Genomics: A Northern Blot Reference set for the Comparative Analysis of Transcript Profiling Technologies

Author(s): Danielle Kemmer | Margareta Faxén | Emily Hodges | Jonathan Lim | Elena Herzog | Elsebrit Ljungström | Anders Lundmark | Mary K. Olsen | Raf Podowski | Erik L. L. Sonnhammer | Peter Nilsson | Mark Reimers | Boris Lenhard | Steven L. Roberds | Claes Wahlestedt | Christer Höög | Pankaj Agarwal | Wyeth W. Wasserman
Volume: 5
Issue: 8
Year: 2004
Maternally and Paternally Silenced Imprinted Genes Differ in Their Intron Content

Author(s): Marie E. Fahey | Walter Mills | Desmond G. Higgins | Tom Moore
Volume: 5
Issue: 8
Year: 2004
In This Issue

Volume: 5
Issue: 8
Year: 2004
Conference Calendar

Volume: 5
Issue: 8
Year: 2004
Overview and Utilization of the NCI Thesaurus

Author(s): Gilberto Fragoso | Sherri de Coronado | Margaret Haber | Frank Hartel | Larry Wright
Volume: 5
Issue: 8
Year: 2006
Som-Based Class Discovery Exploring the ICA-Reduced Features of Microarray Expression Profiles

Author(s): Andrei Dragomir | Seferina Mavroudi | Anastasios Bezerianos
Volume: 5
Issue: 8
Year: 2006
Exploring the Foundation of Genomics: A Northern Blot Reference set for the Comparative Analysis of Transcript Profiling Technologies

Author(s): Danielle Kemmer | Margareta Faxén | Emily Hodges | Jonathan Lim | Elena Herzog | Elsebrit Ljungström | Anders Lundmark | Mary K. Olsen | Raf Podowski | Erik L. L. Sonnhammer | Peter Nilsson | Mark Reimers | Boris Lenhard | Steven L. Roberds | Claes Wahlestedt | Christer Höög | Pankaj Agarwal | Wyeth W. Wasserman
Volume: 5
Issue: 8
Year: 2006
Maternally and Paternally Silenced Imprinted Genes Differ in Their Intron Content

Author(s): Marie E. Fahey | Walter Mills | Desmond G. Higgins | Tom Moore
Volume: 5
Issue: 8
Year: 2006
Sequence Ontology Annotation Guide

Author(s): Karen Eilbeck | Suzanna E. Lewis
Volume: 5
Issue: 8
Year: 2006
The Montagues and the Capulets

Author(s): Carole Goble | Chris Wroe
Volume: 5
Issue: 8
Year: 2006
Standardization Initiatives in the (eco)toxicogenomics Domain: A Review

Author(s): Susanna Assunta Sansone | Norman Morrison | Philippe Rocca-Serra | Jennifer Fostel
Volume: 5
Issue: 8
Year: 2006
Conference Calendar

Volume: 5
Issue: 8
Year: 2004
Standards and Ontologies for Functional Genomics 2

Author(s): Midori A. Harris | Helen Parkinson
Volume: 5
Issue: 8
Year: 2006
In This Issue

Volume: 5
Issue: 8
Year: 2004
Thank you to our Reviewers

Volume: 6
Issue: 7-8
Year: 2005
Conference Calendar

Volume: 6
Issue: 7-8
Year: 2005
Towards Inference of a Biochemical Ontology From a Metabolic Database

Author(s): D. C. McShan
Volume: 6
Issue: 7-8
Year: 2005
Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages

Author(s): Pankaj Jaiswal | Shulamit Avraham | Katica Ilic | Elizabeth A. Kellogg | Susan McCouch | Anuradha Pujar | Leonore Reiser | Seung Y. Rhee | Martin M. Sachs | Mary Schaeffer | Lincoln Stein | Peter Stevens | Leszek Vincent | Doreen Ware | Felipe Zapata
Volume: 6
Issue: 7-8
Year: 2005
On Carcinomas and Other Pathological Entities

Author(s): Barry Smith | Anand Kumar | Werner Ceusters | Cornelius Rosse
Volume: 6
Issue: 7-8
Year: 2005
Using Multiple Ontologies to Integrate Complex Biological Data

Author(s): Mary Shimoyama | Victoria Petri | Dean Pasko | Susan Bromberg | Wenhua Wu | Jiali Chen | Nataliya Nenasheva | Anne Kwitek | Simon Twigger | Howard Jacob
Volume: 6
Issue: 7-8
Year: 2005
The 8th Annual Bio-Ontologies Meeting

Author(s): Robert Stevens | Robin McEntire | Phillip Lord | James. A. Butler
Volume: 6
Issue: 7-8
Year: 2005
eGenomics: Cataloguing our Complete Genome Collection

Author(s): Dawn Field | George Garrity | Norman Morrison | Jeremy Selengut | Peter Sterk | Tatiana Tatusova | Nick Thomson
Volume: 6
Issue: 7-8
Year: 2005
eGenomics: Genomes and the Environment

Author(s): Dawn Field | Bela Tiwari | Jason Snape
Volume: 6
Issue: 7-8
Year: 2005
In Silico Analysis for Transcription Factors With Zn(II)2C6 Binuclear Cluster DNA-Binding Domains in Candida albicans

Author(s): Sergi Maicas | Inmaculada Moreno | Almudena Nieto | Micaela Gómez | Rafael Sentandreu | Eulogio Valentín
Volume: 6
Issue: 7-8
Year: 2005
In This Issue

Volume: 6
Issue: 7-8
Year: 2005
Goodbye to CFG

Volume: 6
Issue: 7-8
Year: 2005
Towards Inference of a Biochemical Ontology From a Metabolic Database

Author(s): D. C. McShan
Volume: 6
Issue: 7-8
Year: 2006
On Carcinomas and Other Pathological Entities

Author(s): Barry Smith | Anand Kumar | Werner Ceusters | Cornelius Rosse
Volume: 6
Issue: 7-8
Year: 2006
Using Multiple Ontologies to Integrate Complex Biological Data

Author(s): Mary Shimoyama | Victoria Petri | Dean Pasko | Susan Bromberg | Wenhua Wu | Jiali Chen | Nataliya Nenasheva | Anne Kwitek | Simon Twigger | Howard Jacob
Volume: 6
Issue: 7-8
Year: 2006
In Silico Analysis for Transcription Factors With Zn(II)2C6 Binuclear Cluster DNA-Binding Domains in Candida albicans

Author(s): Sergi Maicas | Inmaculada Moreno | Almudena Nieto | Micaela Gómez | Rafael Sentandreu | Eulogio Valentín
Volume: 6
Issue: 7-8
Year: 2006
Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages

Author(s): Pankaj Jaiswal | Shulamit Avraham | Katica Ilic | Elizabeth A. Kellogg | Susan McCouch | Anuradha Pujar | Leonore Reiser | Seung Y. Rhee | Martin M. Sachs | Mary Schaeffer | Lincoln Stein | Peter Stevens | Leszek Vincent | Doreen Ware | Felipe Zapata
Volume: 6
Issue: 7-8
Year: 2006
Thank you to our Reviewers

Volume: 6
Issue: 7-8
Year: 2005
Conference Calendar

Volume: 6
Issue: 7-8
Year: 2005
The 8th Annual Bio-Ontologies Meeting

Author(s): Robert Stevens | Robin McEntire | Phillip Lord | James. A. Butler
Volume: 6
Issue: 7-8
Year: 2006
eGenomics: Cataloguing our Complete Genome Collection

Author(s): Dawn Field | George Garrity | Norman Morrison | Jeremy Selengut | Peter Sterk | Tatiana Tatusova | Nick Thomson
Volume: 6
Issue: 7-8
Year: 2006
eGenomics: Genomes and the Environment

Author(s): Dawn Field | Bela Tiwari | Jason Snape
Volume: 6
Issue: 7-8
Year: 2006
Goodbye to CFG

Volume: 6
Issue: 7-8
Year: 2005
In This Issue

Volume: 6
Issue: 7-8
Year: 2005
Conference Calendar

Volume: 5
Issue: 6-7
Year: 2004
Ontologies for the Description of Mouse Phenotypes

Author(s): G. V. Gkoutos | E. C. J. Green | A.-M. Mallon | A. Blake | S. Greenaway | J. M. Hancock | D. Davidson
Volume: 5
Issue: 6-7
Year: 2004
Ontology for Genome Comparison and Genomic Rearrangements

Author(s): Keith Flanagan | Robert Stevens | Matthew Pocock | Pete Lee | Anil Wipat
Volume: 5
Issue: 6-7
Year: 2004
The Molecule Role Ontology: An Ontology for Annotation of Signal Transduction Pathway Molecules in the Scientific Literature

Author(s): Satoko Yamamoto | Takao Asanuma | Toshihisa Takagi | Ken Ichiro Fukuda
Volume: 5
Issue: 6-7
Year: 2004
The SOFG Anatomy Entry List (SAEL): An Annotation Tool for Functional Genomics Data

Author(s): Helen Parkinson | Stuart Aitken | Richard A. Baldock | Jonathan B. L. Bard | Albert Burger | Terry F. Hayamizu | Alan Rector | Martin Ringwald | Jeremy Rogers | Cornelius Rosse | Christian J. Stoeckert | Duncan Davidson
Volume: 5
Issue: 6-7
Year: 2004
Obol: Integrating Language and Meaning in Bio-Ontologies

Author(s): Christopher J. Mungall
Volume: 5
Issue: 6-7
Year: 2004
Biomedical Informatics and Granularity

Author(s): Anand Kumar | Barry Smith | Daniel D. Novotny
Volume: 5
Issue: 6-7
Year: 2004
The Seventh Annual Bio-Ontologies Meeting Moat House Hotel, Glasgow, 30 July 2004

Author(s): Phillip Lord | Robert Stevens
Volume: 5
Issue: 6-7
Year: 2004
Workshop—Predicting the Structure of Biological Molecules

Author(s): Damian Counsell
Volume: 5
Issue: 6-7
Year: 2004
Navigating Public Microarray Databases

Author(s): Christopher J. Penkett | Jürg Bähler
Volume: 5
Issue: 6-7
Year: 2004
Identification of a Core Set of Genes That Signifies Pathways Underlying Cardiac Hypertrophy

Author(s): Claes C. Strøm | Mogens Kruhøffer | Steen Knudsen | Frank Stensgaard-Hansen | Thomas E. N. Jonassen | Torben F. Ørntoft | Stig Haunsø | Søren P. Sheikh
Volume: 5
Issue: 6-7
Year: 2004
In This Issue

Volume: 5
Issue: 6-7
Year: 2004
The SOFG Anatomy Entry List (SAEL): An Annotation Tool for Functional Genomics Data

Author(s): Helen Parkinson | Stuart Aitken | Richard A. Baldock | Jonathan B. L. Bard | Albert Burger | Terry F. Hayamizu | Alan Rector | Martin Ringwald | Jeremy Rogers | Cornelius Rosse | Christian J. Stoeckert | Duncan Davidson
Volume: 5
Issue: 6-7
Year: 2006
Obol: Integrating Language and Meaning in Bio-Ontologies

Author(s): Christopher J. Mungall
Volume: 5
Issue: 6-7
Year: 2006
The Seventh Annual Bio-Ontologies Meeting Moat House Hotel, Glasgow, 30 July 2004

Author(s): Phillip Lord | Robert Stevens
Volume: 5
Issue: 6-7
Year: 2006
Identification of a Core Set of Genes That Signifies Pathways Underlying Cardiac Hypertrophy

Author(s): Claes C. Strøm | Mogens Kruhøffer | Steen Knudsen | Frank Stensgaard-Hansen | Thomas E. N. Jonassen | Torben F. Ørntoft | Stig Haunsø | Søren P. Sheikh
Volume: 5
Issue: 6-7
Year: 2006
Biomedical Informatics and Granularity

Author(s): Anand Kumar | Barry Smith | Daniel D. Novotny
Volume: 5
Issue: 6-7
Year: 2006
Workshop—Predicting the Structure of Biological Molecules

Author(s): Damian Counsell
Volume: 5
Issue: 6-7
Year: 2006
Ontologies for the Description of Mouse Phenotypes

Author(s): G. V. Gkoutos | E. C. J. Green | A.-M. Mallon | A. Blake | S. Greenaway | J. M. Hancock | D. Davidson
Volume: 5
Issue: 6-7
Year: 2006
Ontology for Genome Comparison and Genomic Rearrangements

Author(s): Keith Flanagan | Robert Stevens | Matthew Pocock | Pete Lee | Anil Wipat
Volume: 5
Issue: 6-7
Year: 2006
The Molecule Role Ontology: An Ontology for Annotation of Signal Transduction Pathway Molecules in the Scientific Literature

Author(s): Satoko Yamamoto | Takao Asanuma | Toshihisa Takagi | Ken Ichiro Fukuda
Volume: 5
Issue: 6-7
Year: 2006
Navigating Public Microarray Databases

Author(s): Christopher J. Penkett | Jürg Bähler
Volume: 5
Issue: 6-7
Year: 2006
Conference Calendar

Volume: 5
Issue: 6-7
Year: 2004
In This Issue

Volume: 5
Issue: 6-7
Year: 2004
Critical Assessment of Information Extraction Systems in Biology

Author(s): Christian Blaschke | Lynette Hirschman | Alexander Yeh | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2003
ISMB 2003 Text Mining SIG Meeting Report

Author(s): Christian Blaschke | Alexander Yeh | Lynette Hirschman | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2003
ISMB 2003 Bio-ontologies SIG and Sixth Annual Bio-ontologies Meeting Report

Author(s): Phillip Lord | Robert Stevens
Volume: 4
Issue: 6
Year: 2003
ISMB 2003 BioPathways SIG and 5th BioPathways Meeting

Author(s): Vincent Schachter | Aviv Regev
Volume: 4
Issue: 6
Year: 2003
11th Intelligent Systems for Molecular Biology 2003 (ISMB2003)

Author(s): Catherine A. Abbott
Volume: 4
Issue: 6
Year: 2003
Segmental Trisomy of Mouse Chromosome 17: Introducing anAlternative Model of Down’s Syndrome

Author(s): Jiri Forejt | Tomáš Vacík | Soňa Gregorová
Volume: 4
Issue: 6
Year: 2003
The Characteristics of Human Genes: Analysis of Human Chromosome 22

Author(s): Ian Dunham | David M. Beare | John E. Collins
Volume: 4
Issue: 6
Year: 2003
Biobanks for Genomics and Genomics for Biobanks

Author(s): Anne Cambon-Thomsen | Pascal Ducournau | Pierre-Antoine Gourraud | David Pontille
Volume: 4
Issue: 6
Year: 2003
Structure and Sequence of the Human Fast Skeletal Troponin T(TNNT3) Gene: Insight Into the Evolution of the Gene andthe Origin of the Developmentally Regulated Isoforms

Author(s): Raymund Stefancsik | Jeffrey D. Randall | Chengjian Mao | Satyapriya Sarkar
Volume: 4
Issue: 6
Year: 2003
Steady-State Analysis of Genetic Regulatory Networks Modelled byProbabilistic Boolean Networks

Author(s): Ilya Shmulevich | Ilya Gluhovsky | Ronaldo F. Hashimoto | Edward R. Dougherty | Wei Zhang
Volume: 4
Issue: 6
Year: 2003
A Molecular Phylogenomic Analysis of the ILR1-Like Family of IAAAmidohydrolase Genes

Author(s): James J. Campanella | Daniel Larko | John Smalley
Volume: 4
Issue: 6
Year: 2003
Gene Expression Profiling on Global cDNA Arrays Gives HintsConcerning Potential Signal Transduction Pathways Involved inCardiac Fibrosis of Renal Failure

Author(s): Kerstin Amann | Heidrun Ridinger | Christiane Rutenberg | Eberhard Ritz | Gerhard Mall | Christian Maercker
Volume: 4
Issue: 6
Year: 2003
Another Year for CFG

Author(s): Steve Oliver
Volume: 4
Issue: 6
Year: 2003
Meeting Highlights: International Summer School, ‘From Genome to Life’

Author(s): Jo Wixon
Volume: 3
Issue: 6
Year: 2002
Flowering Buds of Globular Proteins: Transpiring Simplicity of Protein Organization

Author(s): Igor N. Berezovsky | Edward N. Trifonov
Volume: 3
Issue: 6
Year: 2002
The Annotation of RNA Motifs

Author(s): Neocles B. Leontis | Eric Westhof
Volume: 3
Issue: 6
Year: 2002
The Evolution of Light Stress Proteins in Photosynthetic Organisms

Author(s): Mounia Heddad | Iwona Adamska
Volume: 3
Issue: 6
Year: 2002
Learning about Gene Regulatory Networks from Gene Deletion Experiments

Author(s): Thomas Schlitt | Alvis Brazma
Volume: 3
Issue: 6
Year: 2002
Endogenous Retroviruses and Human Evolution

Author(s): Konstantin Khodosevich | Yuri Lebedev | Eugene Sverdlov
Volume: 3
Issue: 6
Year: 2002
Correct Assignment of Homology is Crucial When Genomics Meets Molecular Evolution

Author(s): Mohamed Zouine | Quentin Sculo | Bernard Labedan
Volume: 3
Issue: 6
Year: 2002
Meeting Review: Intelligent Systems for Molecular Biology 2002 (ISMB02)

Author(s): K. Cara Woodwark
Volume: 3
Issue: 6
Year: 2002
Proteome Analysis of the Plasma Membrane of Mycobacterium tuberculosis

Author(s): Sudhir Sinha | Shalini Arora | K. Kosalai | Abdelkader Namane | Alex S. Pym | Stewart T. Cole
Volume: 3
Issue: 6
Year: 2002
Pathway Databases

Author(s): Jo Wixon
Volume: 2
Issue: 6
Year: 2001
Meeting Highlights: 15th International Mouse Genome Conference

Author(s): Jo Wixon
Volume: 2
Issue: 6
Year: 2001
Meeting Highlights: Joint Cold Spring Harbor Laboratory and Wellcome Trust Conference – Genome Informatics

Author(s): Jo Wixon | Jennifer Ashurst | Jo Dicks
Volume: 2
Issue: 6
Year: 2001
C2M: Configurable Chemical Middleware

Author(s): Paul van der Vet | Hans E. Roosendaal | Peter A. T. M. Geurts
Volume: 2
Issue: 6
Year: 2001
The Low Down on e-Science and Grids for Biology

Author(s): Carole Goble
Volume: 2
Issue: 6
Year: 2001
In This Issue

Volume: 3
Issue: 6
Year: 2002
In This Issue

Volume: 2
Issue: 6
Year: 2001
Upstream – News in Genomics

Volume: 2
Issue: 6
Year: 2001
Conference Calendar

Volume: 2
Issue: 6
Year: 2001
Conference Calendar

Volume: 4
Issue: 6
Year: 2003
In This Issue

Volume: 4
Issue: 6
Year: 2003
The Annotation of RNA Motifs

Author(s): Neocles B. Leontis | Eric Westhof
Volume: 3
Issue: 6
Year: 2006
The Evolution of Light Stress Proteins in Photosynthetic Organisms

Author(s): Mounia Heddad | Iwona Adamska
Volume: 3
Issue: 6
Year: 2006
Endogenous Retroviruses and Human Evolution

Author(s): Konstantin Khodosevich | Yuri Lebedev | Eugene Sverdlov
Volume: 3
Issue: 6
Year: 2006
Proteome Analysis of the Plasma Membrane of Mycobacterium Tuberculosis

Author(s): Sudhir Sinha | Shalini Arora | K. Kosalai | Abdelkader Namane | Alex S. Pym | Stewart T. Cole
Volume: 3
Issue: 6
Year: 2006
Critical Assessment of Information Extraction Systems in Biology

Author(s): Christian Blaschke | Lynette Hirschman | Alexander Yeh | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2006
ISMB 2003 Bio-ontologies SIG and Sixth Annual Bio-ontologies Meeting Report

Author(s): Phillip Lord | Robert Stevens
Volume: 4
Issue: 6
Year: 2006
Biobanks for Genomics and Genomics for Biobanks

Author(s): Anne Cambon-Thomsen | Pascal Ducournau | Pierre-Antoine Gourraud | David Pontille
Volume: 4
Issue: 6
Year: 2006
Structure and Sequence of the Human Fast Skeletal Troponin T (TNNT3) Gene: Insight Into the Evolution of the Gene and the Origin of the Developmentally Regulated Isoforms

Author(s): Raymund Stefancsik | Jeffrey D. Randall | Chengjian Mao | Satyapriya Sarkar
Volume: 4
Issue: 6
Year: 2006
Steady-State Analysis of Genetic Regulatory Networks Modelled by Probabilistic Boolean Networks

Author(s): Ilya Shmulevich | Ilya Gluhovsky | Ronaldo F. Hashimoto | Edward R. Dougherty | Wei Zhang
Volume: 4
Issue: 6
Year: 2006
A Molecular Phylogenomic Analysis of the ILR1-Like Family of IAA Amidohydrolase Genes

Author(s): James J. Campanella | Daniel Larko | John Smalley
Volume: 4
Issue: 6
Year: 2006
Gene Expression Profiling on Global cDNA Arrays Gives Hints Concerning Potential Signal Transduction Pathways Involved in Cardiac Fibrosis of Renal Failure

Author(s): Kerstin Amann | Heidrun Ridinger | Christiane Rutenberg | Eberhard Ritz | Gerhard Mall | Christian Maercker
Volume: 4
Issue: 6
Year: 2006
Meeting Highlights: 15th International Mouse Genome Conference

Author(s): Jo Wixon
Volume: 2
Issue: 6
Year: 2001
Meeting Highlights: Joint Cold Spring Harbor Laboratory and Wellcome Trust Conference – Genome Informatics

Author(s): Jo Wixon | Jennifer Ashurst | Jo Dicks
Volume: 2
Issue: 6
Year: 2006
The Low Down on e-Science and Grids for Biology

Author(s): Carole Goble
Volume: 2
Issue: 6
Year: 2006
Upstream – News in Genomics

Volume: 2
Issue: 6
Year: 2001
Flowering Buds of Globular Proteins: Transpiring Simplicity of Protein Organization

Author(s): Igor N. Berezovsky | Edward N. Trifonov
Volume: 3
Issue: 6
Year: 2006
Learning About Gene Regulatory Networks From Gene Deletion Experiments

Author(s): Thomas Schlitt | Alvis Brazma
Volume: 3
Issue: 6
Year: 2006
Correct Assignment of Homology is Crucial When Genomics Meets Molecular Evolution

Author(s): Mohamed Zouine | Quentin Sculo | Bernard Labedan
Volume: 3
Issue: 6
Year: 2006
Intelligent Systems for Molecular Biology 2002 (ISMB02)

Author(s): K. Cara Woodwark
Volume: 3
Issue: 6
Year: 2006
Conference Calendar

Volume: 4
Issue: 6
Year: 2003
11th Intelligent Systems for Molecular Biology 2003 (ISMB 2003)

Author(s): Catherine A. Abbott
Volume: 4
Issue: 6
Year: 2006
C2M: Configurable Chemical Middleware

Author(s): Paul van der Vet | Hans E. Roosendaal | Peter A. T. M. Geurts
Volume: 2
Issue: 6
Year: 2006
International Summer School, ‘ From Genome to Life’

Author(s): Jo Wixon
Volume: 3
Issue: 6
Year: 2006
Segmental Trisomy of Mouse Chromosome 17: Introducing an Alternative Model of Down’s Syndrome

Author(s): Jiri Forejt | Tomáš Vacík | Soňa Gregorová
Volume: 4
Issue: 6
Year: 2006
Conference Calendar

Volume: 2
Issue: 6
Year: 2001
Pathway Databases

Author(s): Jo Wixon
Volume: 2
Issue: 6
Year: 2001
In This Issue

Volume: 2
Issue: 6
Year: 2001
In This Issue

Volume: 3
Issue: 6
Year: 2002
ISMB 2003 Text Mining SIG Meeting Report

Author(s): Christian Blaschke | Alexander Yeh | Lynette Hirschman | Alfonso Valencia
Volume: 4
Issue: 6
Year: 2006
ISMB 2003 BioPathways SIG and 5th BioPathways Meeting

Author(s): Vincent Schachter | Aviv Regev
Volume: 4
Issue: 6
Year: 2006
The Characteristics of Human Genes: Analysis of Human Chromosome 22

Author(s): Ian Dunham | David M. Beare | John E. Collins
Volume: 4
Issue: 6
Year: 2006
Another Year for CFG

Author(s): Steve Oliver
Volume: 4
Issue: 6
Year: 2003
In This Issue

Volume: 4
Issue: 6
Year: 2003
Conference Calendar

Volume: 6
Issue: 5-6
Year: 2005
RNA Interference in Practice

Author(s): Alan Lau
Volume: 6
Issue: 5-6
Year: 2005
Bioinformatics and Molecular Evolution

Author(s): Damian Counsell
Volume: 6
Issue: 5-6
Year: 2005
Poultry Genomics Puts Meat on the Table

Author(s): Ed Smith | Olivier Pourquié | Dave Burt
Volume: 6
Issue: 5-6
Year: 2005
ESF Workshop on ‘Sustainability and Governance of Web and GRID Resources in Functional Genomics’

Author(s): Paul van der Vet | Theo Huibers | Pierre-Alain Binz | Martin Hofmann
Volume: 6
Issue: 5-6
Year: 2005
Characterization of Expressed Sequence Tags From a Gallus gallus Pineal Gland cDNA Library

Author(s): Stefanie Hartman | Greg Touchton | Jessica Wynn | Tuoyu Geng | Nelson W. Chong | Ed Smith
Volume: 6
Issue: 5-6
Year: 2005
Atypical CTSK Transcripts and ARNT Transcription Read-Through into CTSK

Author(s): Fabienne S. Giraudeau | Jean-Philippe Walhin | Paul R. Murdock | Nigel K. Spurr | Ian C. Gray
Volume: 6
Issue: 5-6
Year: 2005
In This Issue

Volume: 6
Issue: 5-6
Year: 2005
Atypical CTSK Transcripts and ARNT Transcription Read-Through Into CTSK

Author(s): Fabienne S. Giraudeau | Jean-Philippe Walhin | Paul R. Murdock | Nigel K. Spurr | Ian C. Gray
Volume: 6
Issue: 5-6
Year: 2006
Characterization of Expressed Sequence Tags From a Gallus gallus Pineal Gland cDNA Library

Author(s): Stefanie Hartman | Greg Touchton | Jessica Wynn | Tuoyu Geng | Nelson W. Chong | Ed Smith
Volume: 6
Issue: 5-6
Year: 2006
Conference Calendar

Volume: 6
Issue: 5-6
Year: 2005
RNA Interference in Practice

Author(s): Alan Lau
Volume: 6
Issue: 5-6
Year: 2006
Bioinformatics and Molecular Evolution

Author(s): Damian Counsell
Volume: 6
Issue: 5-6
Year: 2006
Poultry Genomics Puts Meat on the Table

Author(s): Ed Smith | Olivier Pourquié | Dave Burt
Volume: 6
Issue: 5-6
Year: 2006
ESF Workshop on ‘Sustainability and Governance of Web and GRID Resources in Functional Genomics’

Author(s): Paul van der Vet | Theo Huibers | Pierre-Alain Binz | Martin Hofmann
Volume: 6
Issue: 5-6
Year: 2006
In This Issue

Volume: 6
Issue: 5-6
Year: 2005
A Case Study on Choosing Normalization Methods and Test Statistics for Two-Channel Microarray Data

Author(s): Yang Xie | Kyeong S. Jeong | Wei Pan | Arkady Khodursky | Bradley P. Carlin
Volume: 5
Issue: 5
Year: 2004
Genome-Wide Analysis of the Effects of Heat Shock on a Saccharomyces cerevisiae Mutant With a Constitutively Activated cAMP-Dependent Pathway

Author(s): Dawn L. Jones | June Petty | David C. Hoyle | Andrew Hayes | Stephen G. Oliver | Isabel Riba-Garcia | Simon J. Gaskell | Lubomira Stateva
Volume: 5
Issue: 5
Year: 2004
Comparative Analysis of the Testis and Ovary Transcriptomes in Zebrafish by Combining Experimental and Computational Tools

Author(s): Yang Li | Jer Ming Chia | Richard Bartfai | Alan Christoffels | Gen Hua Yue | Ke Ding | Mei Yin Ho | James A. Hill | Elia Stupka | Laszlo Orban
Volume: 5
Issue: 5
Year: 2004
A critical and Integrated View of the Yeast Interactome

Author(s): Michael Cornell | Norman W. Paton | Stephen G. Oliver
Volume: 5
Issue: 5
Year: 2004
Fishing With (Proto)Net—A Principled Approach toProtein Target Selection

Author(s): Michal Linial
Volume: 4
Issue: 5
Year: 2003
The Journey to smORFland

Author(s): Wagied Davids | Hans-Henrik Fuxelius | Siv G. E. Andersson
Volume: 4
Issue: 5
Year: 2003
Quantitative Proteomics of Lymphocytes

Author(s): Ivan Lefkovits
Volume: 4
Issue: 5
Year: 2003
Padlock and Proximity Probes for In Situ andArray-Based Analyses: Tools for the Post-Genomic Era

Author(s): Ulf Landegren | Fredrik Dahl | Mats Nilsson | Simon Fredriksson | Johan Banér | Mats Gullberg | Jonas Jarvius | Sigrun Gustafsdottir | Ola Söderberg | Olle Ericsson | Johan Stenberg | Edith Schallmeiner
Volume: 4
Issue: 5
Year: 2003
Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses

Author(s): Andrea Bauer | Boris Beckmann | Christian Busold | Ole Brandt | Wlad Kusnezow | Janne Pullat | Verena Aign | Kurt Fellenberg | Robert Fleischer | Anette Jacob | Marcus Frohme | Jörg D. Hoheisel
Volume: 4
Issue: 5
Year: 2003
Genomics in the Czech Republic

Author(s): Václav Paçes
Volume: 4
Issue: 5
Year: 2003
Functional Genomics and Disease in 2003

Author(s): Michael J. Taussig
Volume: 4
Issue: 5
Year: 2003
Meeting Highlights: Genome Informatics

Author(s): Jo Wixon | Jennifer Ashurst
Volume: 4
Issue: 5
Year: 2003
Worldwide Genomic Resources for Non-Model FishSpecies

Author(s): Melody S. Clark | Douglas L. Crawford | Andrew Cossins
Volume: 4
Issue: 5
Year: 2003
Proposal for a Standard Representation of Two-Dimensional GelElectrophoresis Data

Author(s): Andrew Jones | Jonathan Wastling | Ela Hunt
Volume: 4
Issue: 5
Year: 2003
Proteins Interacting with Caenorhabditis elegans Gα Subunits

Author(s): Edwin Cuppen | Alexander M. van der Linden | Gert Jansen | Ronald H. A. Plasterk
Volume: 4
Issue: 5
Year: 2003
Analysis of Known Bacterial Protein Vaccine Antigens RevealsBiased Physical Properties and Amino Acid Composition

Author(s): Carl Mayers | Melanie Duffield | Sonya Rowe | Julie Miller | Bryan Lingard | Sarah Hayward | Richard W. Titball
Volume: 4
Issue: 5
Year: 2003
Post-Normalization Quality Assessment Visualization of MicroarrayData

Author(s): John McClure | Ernst Wit
Volume: 4
Issue: 5
Year: 2003
The 50th ASMS Conference on Mass Spectrometry and Allied Topics

Author(s): Francesco L. Brancia
Volume: 3
Issue: 5
Year: 2002
CCP11 Group Meeting—Towards the Functional Analysis of Microarrays

Author(s): Clare Sansom
Volume: 3
Issue: 5
Year: 2002
Meeting Review: ESF Workshop on ‘Impact of Nucleic Acid Chemistry on Gene Function Analysis: Antisense, Aptamers, Ribozymes and RNAi’

Author(s): Kathrin Heermeier | Hans Prydz | Jutta Reinhard-Rupp | Joachim Engels
Volume: 3
Issue: 5
Year: 2002
A Computational Strategy for Protein Function Assignment which Addresses the Multidomain Problem

Author(s): A. J. Pérez | A. Rodríguez | O. Trelles | G. Thode
Volume: 3
Issue: 5
Year: 2002
A Mathematical Model for Suppression Subtractive Hybridization

Author(s): Chetan Gadgil | Anette Rink | Craig Beattie | Wei-Shou Hu
Volume: 3
Issue: 5
Year: 2002
Upstream—News in Genomics

Volume: 3
Issue: 5
Year: 2002
Website Review: Protein-Protein Interactions on the Web

Author(s): Jo Wixon
Volume: 2
Issue: 5
Year: 2001
Meeting Review: The Intelligent Systems in Bioinformatics Conference 2001 (ISMB2001)

Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2001
Meeting Review: The Bioinformatics Open Source Conference 2001 (BOSC 2001)

Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2001
iSPOT: A Web Tool for the Analysis and Recognition of Protein Domain Specificity

Author(s): Barbara Brannetti | Andreas Zanzoni | Luisa Montecchi-Palazzi | Gianni Cesareni | Manuela Helmer-Citterich
Volume: 2
Issue: 5
Year: 2001
Extracting Information Automatically from Biological Literature

Author(s): Christian Blaschke | Robert Hoffmann | Juan Carlos Oliveros | Alfonso Valencia
Volume: 2
Issue: 5
Year: 2001
Synthetic Peptide and Protein Domain Arrays Prepared by the SPOT Technology

Author(s): Jens Schneider-Mergener
Volume: 2
Issue: 5
Year: 2001
Mapping Protein-Protein Interactions with Combinatorial Peptides

Author(s): Brian K. Kay
Volume: 2
Issue: 5
Year: 2001
How Useful Will Functional Proteomics Data Be?

Author(s): Pierre Legrain
Volume: 2
Issue: 5
Year: 2001
Protein Arrays: Issues to Be Addressed

Author(s): Michael J. Taussig
Volume: 2
Issue: 5
Year: 2001
ESF Workshop ‘Proteomics: Focus on Protein Interactions’

Author(s): Gianni Cesareni
Volume: 2
Issue: 5
Year: 2001
Identification of Membrane Proteins in the Hyperthermophilic Archaeon Pyrococcus furiosus Using Proteomics and Prediction Programs

Author(s): James F. Holden | Farris L. Poole II | Sandra L. Tollaksen | Carol S. Giometti | Hanjo Lim | John R. Yates III | Michael W. W. Adams
Volume: 2
Issue: 5
Year: 2001
In This Issue

Volume: 2
Issue: 5
Year: 2001
Conference Calendar

Volume: 3
Issue: 5
Year: 2002
In This Issue

Volume: 3
Issue: 5
Year: 2002
In This Issue

Volume: 4
Issue: 5
Year: 2003
Conference Calendar

Volume: 4
Issue: 5
Year: 2003
Comparative and Functional Genomics

Volume: 4
Issue: 5
Year: 2003
Conference Calendar

Volume: 5
Issue: 5
Year: 2004
Identification of Membrane Proteins in the Hyperthermophilic Archaeon Pyrococcus Furiosus Using Proteomics and Prediction Programs

Author(s): James F. Holden | Farris L. Poole II | Sandra L. Tollaksen | Carol S. Giometti | Hanjo Lim | John R. Yates III | Michael W. W. Adams
Volume: 2
Issue: 5
Year: 2006
CCP11 Group Meeting—Towards the Functional Analysis of Microarrays

Author(s): Clare Sansom
Volume: 3
Issue: 5
Year: 2006
A Computational Strategy for Protein Function Assignment Which Addresses the Multidomain Problem

Author(s): A. J. Pérez | A. Rodríguez | O. Trelles | G. Thode
Volume: 3
Issue: 5
Year: 2006
A Mathematical Model for Suppression Subtractive Hybridization

Author(s): Chetan Gadgil | Anette Rink | Craig Beattie | Wei-Shou Hu
Volume: 3
Issue: 5
Year: 2006
Quantitative Proteomics of Lymphocytes

Author(s): Ivan Lefkovits
Volume: 4
Issue: 5
Year: 2006
Padlock and Proximity Probes for in Situ and Array-Based Analyses: Tools for the Post-Genomic Era

Author(s): Ulf Landegren | Fredrik Dahl | Mats Nilsson | Simon Fredriksson | Johan Banér | Mats Gullberg | Jonas Jarvius | Sigrun Gustafsdottir | Ola Söderberg | Olle Ericsson | Johan Stenberg | Edith Schallmeiner
Volume: 4
Issue: 5
Year: 2006
Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses

Author(s): Andrea Bauer | Boris Beckmann | Christian Busold | Ole Brandt | Wlad Kusnezow | Janne Pullat | Verena Aign | Kurt Fellenberg | Robert Fleischer | Anette Jacob | Marcus Frohme | Jörg D. Hoheisel
Volume: 4
Issue: 5
Year: 2006
Proposal for a Standard Representation of Two-Dimensional Gel Electrophoresis Data

Author(s): Andrew Jones | Jonathan Wastling | Ela Hunt
Volume: 4
Issue: 5
Year: 2006
Proteins Interacting With Caenorhabditis elegans Gα Subunits

Author(s): Edwin Cuppen | Alexander M. van der Linden | Gert Jansen | Ronald H. A. Plasterk
Volume: 4
Issue: 5
Year: 2006
Analysis of Known Bacterial Protein Vaccine Antigens Reveals Biased Physical Properties and Amino Acid Composition

Author(s): Carl Mayers | Melanie Duffield | Sonya Rowe | Julie Miller | Bryan Lingard | Sarah Hayward | Richard W. Titball
Volume: 4
Issue: 5
Year: 2006
A Case Study on Choosing Normalization Methods and Test Statistics for Two-Channel Microarray Data

Author(s): Yang Xie | Kyeong S. Jeong | Wei Pan | Arkady Khodursky | Bradley P. Carlin
Volume: 5
Issue: 5
Year: 2006
Genome-Wide Analysis of the Effects of Heat Shock on a Saccharomyces cerevisiae Mutant With a Constitutively Activated cAMP-Dependent Pathway

Author(s): Dawn L. Jones | June Petty | David C. Hoyle | Andrew Hayes | Stephen G. Oliver | Isabel Riba-Garcia | Simon J. Gaskell | Lubomira Stateva
Volume: 5
Issue: 5
Year: 2006
Comparative Analysis of the Testis and Ovary Transcriptomes in Zebrafish by Combining Experimental and Computational Tools

Author(s): Yang Li | Jer Ming Chia | Richard Bartfai | Alan Christoffels | Gen Hua Yue | Ke Ding | Mei Yin Ho | James A. Hill | Elia Stupka | Laszlo Orban
Volume: 5
Issue: 5
Year: 2006
A critical and Integrated View of the Yeast Interactome

Author(s): Michael Cornell | Norman W. Paton | Stephen G. Oliver
Volume: 5
Issue: 5
Year: 2006
Website Review: Protein-Protein Interactions on the Web

Author(s): Jo Wixon
Volume: 2
Issue: 5
Year: 2001
iSPOT: A Web Tool for the Analysis and Recognition of Protein Domain Specificity

Author(s): Barbara Brannetti | Andreas Zanzoni | Luisa Montecchi-Palazzi | Gianni Cesareni | Manuela Helmer-Citterich
Volume: 2
Issue: 5
Year: 2006
Extracting Information Automatically From Biological Literature

Author(s): Christian Blaschke | Robert Hoffmann | Juan Carlos Oliveros | Alfonso Valencia
Volume: 2
Issue: 5
Year: 2006
Synthetic Peptide and Protein Domain Arrays Prepared by the SPOT Technology

Author(s): Jens Schneider-Mergener
Volume: 2
Issue: 5
Year: 2006
Mapping Protein-Protein Interactions With Combinatorial Peptides

Author(s): Brian K. Kay
Volume: 2
Issue: 5
Year: 2006
How Useful Will Functional Proteomics Data Be?

Author(s): Pierre Legrain
Volume: 2
Issue: 5
Year: 2006
Protein Arrays: Issues to Be Addressed

Author(s): Michael J. Taussig
Volume: 2
Issue: 5
Year: 2006
ESF Workshop ‘Proteomics: Focus on Protein Interactions’

Author(s): Gianni Cesareni
Volume: 2
Issue: 5
Year: 2006
The 50th ASMS Conference on Mass Spectrometry and Allied Topics

Author(s): Francesco L. Brancia
Volume: 3
Issue: 5
Year: 2002
Meeting Review: ESF Workshop on ‘Impact of Nucleic Acid Chemistry on Gene Function Analysis: Antisense, Aptamers, Ribozymes and RNAi’

Author(s): Kathrin Heermeier | Hans Prydz | Jutta Reinhard-Rupp | Joachim Engels
Volume: 3
Issue: 5
Year: 2006
Upstream—News in Genomics

Volume: 3
Issue: 5
Year: 2002
Meeting Highlights: Genome Informatics

Author(s): Jo Wixon | Jennifer Ashurst
Volume: 4
Issue: 5
Year: 2006
Post-Normalization Quality Assessment Visualization of Microarray Data

Author(s): John McClure | Ernst Wit
Volume: 4
Issue: 5
Year: 2006
The Journey to smORFland

Author(s): Wagied Davids | Hans-Henrik Fuxelius | Siv G. E. Andersson
Volume: 4
Issue: 5
Year: 2006
In This Issue

Volume: 5
Issue: 5
Year: 2004
Meeting Review: The Intelligent Systems in Bioinformatics Conference 2001 (ISMB2001)

Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2001
Meeting Review: The Bioinformatics Open Source Conference 2001 (BOSC 2001)

Author(s): K. Cara Woodwark
Volume: 2
Issue: 5
Year: 2006
In This Issue

Volume: 2
Issue: 5
Year: 2001
Conference Calendar

Volume: 3
Issue: 5
Year: 2002
In This Issue

Volume: 3
Issue: 5
Year: 2002
Conference Calendar

Volume: 4
Issue: 5
Year: 2003
Genomics in the Czech Republic

Author(s): Václav Paçes
Volume: 4
Issue: 5
Year: 2006
Functional Genomics and Disease in 2003

Author(s): Michael J. Taussig
Volume: 4
Issue: 5
Year: 2006
Comparative and Functional Genomics

Volume: 4
Issue: 5
Year: 2003
Worldwide Genomic Resources for Non-Model Fish Species

Author(s): Melody S. Clark | Douglas L. Crawford | Andrew Cossins
Volume: 4
Issue: 5
Year: 2006
In This Issue

Volume: 4
Issue: 5
Year: 2003
Conference Calendar

Volume: 5
Issue: 5
Year: 2004
In This Issue

Volume: 5
Issue: 5
Year: 2004
Swine Genome Sequencing Consortium (SGSC): A Strategic Roadmap for Sequencing The Pig Genome

Author(s): Lawrence B. Schook | Jonathan E. Beever | Jane Rogers | Sean Humphray | Alan Archibald | Patrick Chardon | Denis Milan | Gary Rohrer | Kellye Eversole
Volume: 6
Issue: 4
Year: 2005
Effect of Stress on Viral–Bacterial Synergy in Bovine Respiratory Disease: Novel Mechanisms to Regulate Inflammation

Author(s): P. D. Hodgson | P. Aich | A. Manuja | K. Hokamp | F. M. Roche | F. S. L. Brinkman | A. Potter | L. A. Babiuk | P. J. Griebel
Volume: 6
Issue: 4
Year: 2005
Proteomic Analysis of Colorectal Cancer: Prefractionation Strategies Using two-Dimensional Free-Flow Electrophoresis

Author(s): Robert L. Moritz | Anita R. Skandarajah | Hong Ji | Richard J. Simpson
Volume: 6
Issue: 4
Year: 2005
A Phylogenomic Study of the Genus Alphavirus Employing Whole Genome Comparison

Author(s): Aimée J. Luers | Sandra D. Adams | John V. Smalley | James J. Campanella
Volume: 6
Issue: 4
Year: 2005
The Cadherin Superfamily in Anopheles gambiae: a Comparative Study With Drosophila melanogaster

Author(s): Catarina Moita | Sérgio Simões | Luís F. Moita | António Jacinto | Pedro Fernandes
Volume: 6
Issue: 4
Year: 2005
A 4 Mb High Resolution BAC Contig on Bovine Chromosome 1q12 and Comparative Analysis With Human Chromosome 21q22

Author(s): Cord Drögemüller | Anne Wöhlke | Tosso Leeb | Ottmar Distl
Volume: 6
Issue: 4
Year: 2005
Design, Implementation and Maintenance of a Model Organism Database for Arabidopsis thaliana

Author(s): Danforth Weems | Neil Miller | Margarita Garcia-Hernandez | Eva Huala | Seung Y. Rhee
Volume: 5
Issue: 4
Year: 2004
Mapping the Gene Ontology Into the Unified Medical Language System

Author(s): Jane Lomax | Alexa T. McCray
Volume: 5
Issue: 4
Year: 2004
Evolution and Cellular Function of Monothiol Glutaredoxins: Involvement in Iron-Sulphur Cluster Assembly

Author(s): Felipe Vilella | Rui Alves | María Teresa Rodríguez-Manzaneque | Gemma Bellí | Swarna Swaminathan | Per Sunnerhagen | Enrique Herrero
Volume: 5
Issue: 4
Year: 2004
Comparative Genomic Assessment of Novel Broad-Spectrum Targets for Antibacterial Drugs

Author(s): Thomas A. White | Douglas B. Kell
Volume: 5
Issue: 4
Year: 2004
Microarray Probe Expression Measures, Data Normalization andStatistical Validation

Author(s): Silvia Saviozzi | Raffaele A. Calogero
Volume: 4
Issue: 4
Year: 2003
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