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PLoS Computational Biology

ISSN: 1553--734X
Publisher: Public Library of Science (PLoS)


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The Activity Reaction Core and Plasticity of Metabolic Networks.

Author(s): Almaas | Oltvai | Barabási
Volume: 1
Issue: 7
Year: 2005
Comparing the Dictyostelium and Entamoeba Genomes Reveals an Ancient Split in the Conosa Lineage.

Author(s): Song | Xu | Olsen | Loomis | Shaulsky | Kuspa | Sucgang
Volume: 1
Issue: 7
Year: 2005
Selective Constraint on Noncoding Regions of Hominid Genomes.

Author(s): Bush | Lahn
Volume: 1
Issue: 7
Year: 2005
Genome Trees from Conservation Profiles.

Author(s): Tekaia | Yeramian
Volume: 1
Issue: 7
Year: 2005
Segregation of the brain into gray and white matter: a design minimizing conduction delays.

Author(s): Wen Quan | Chklovskii Dmitri B
Volume: 1
Issue: 7
Year: 2005
New maximum likelihood estimators for eukaryotic intron evolution.

Author(s): Nguyen Hung D | Yoshihama Maki | Kenmochi Naoya
Volume: 1
Issue: 7
Year: 2005
Revealing Posttranscriptional Regulatory Elements Through Network-Level Conservation.

Author(s): Chan | Elemento | Tavazoie
Volume: 1
Issue: 7
Year: 2005
Use of Artificial Genomes in Assessing Methods for Atypical Gene Detection.

Author(s): Azad | Lawrence
Volume: 1
Issue: 6
Year: 2005
A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes.

Author(s): Haft | Selengut | Mongodin | Nelson
Volume: 1
Issue: 6
Year: 2005
Allele-specific amplification in cancer revealed by SNP array analysis.

Author(s): Laframboise Thomas | Weir Barbara A | Zhao Xiaojun | Beroukhim Rameen | Li Cheng | Harrington David | Sellers William R | Meyerson Matthew
Volume: 1
Issue: 6
Year: 2005
Refining protein subcellular localization.

Author(s): Scott Michelle S | Calafell Sara J | Thomas David Y | Hallett Michael T
Volume: 1
Issue: 6
Year: 2005
Quasispecies made simple.

Author(s): Bull J J | Meyers Lauren Ancel | Lachmann Michael
Volume: 1
Issue: 6
Year: 2005
Quantitative analysis of genetic and neuronal multi-perturbation experiments.

Author(s): Kaufman Alon | Keinan Alon | Meilijson Isaac | Kupiec Martin | Ruppin Eytan
Volume: 1
Issue: 6
Year: 2005
Bioinformatics education--perspectives and challenges.

Author(s): Ranganathan Shoba
Volume: 1
Issue: 6
Year: 2005
NIH Roadmap Interdisciplinary Research Initiatives.

Author(s): Huerta Michael F | Farber Gregory K | Wilder Elizabeth L | Kleinman Dushanka V | Grady Patricia A | Schwartz David A | Tabak Lawrence A
Volume: 1
Issue: 6
Year: 2005
Structural Evolution of the Protein Kinase-Like Superfamily.

Author(s): Scheeff | Bourne
Volume: 1
Issue: 5
Year: 2005
Flux balance analysis of mycolic Acid pathway: targets for anti-tubercular drugs.

Author(s): Raman Karthik | Rajagopalan Preethi | Chandra Nagasuma
Volume: 1
Issue: 5
Year: 2005
Genomic Variability within an Organism Exposes Its Cell Lineage Tree.

Author(s): Frumkin Dan | Wasserstrom Adam | Kaplan Shai | Feige Uriel | Shapiro Ehud
Volume: 1
Issue: 5
Year: 2005
SNPdetector: A Software Tool for Sensitive and Accurate SNP Detection.

Author(s): Zhang Jinghui | Wheeler David A | Yakub Imtiaz | Wei Sharon | Sood Raman | Rowe William | Liu Paul P | Gibbs Richard A | Buetow Kenneth H
Volume: 1
Issue: 5
Year: 2005
Ultrasensitization: switch-like regulation of cellular signaling by transcriptional induction.

Author(s): Legewie Stefan | Blüthgen Nils | Schäfer Reinhold | Herzel Hanspeter
Volume: 1
Issue: 5
Year: 2005
Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.

Author(s): Rodionov Dmitry A | Dubchak Inna L | Arkin Adam P | Alm Eric J | Gelfand Mikhail S
Volume: 1
Issue: 5
Year: 2005
Transition to Quorum Sensing in an Agrobacterium Population: A Stochastic Model.

Author(s): Goryachev | Toh | Wee | Lee | Zhang | Zhang
Volume: 1
Issue: 4
Year: 2005
Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing.

Author(s): Xiao | Yang | Burckin | Shiue | Hartzog | Segal
Volume: 1
Issue: 4
Year: 2005
A Digital Atlas to Characterize the Mouse Brain Transcriptome.

Author(s): Carson | Ju | Lu | Thaller | Xu | Pallas | Crair | Warren | Chiu | Eichele
Volume: 1
Issue: 4
Year: 2005
Inferring Hypotheses on Functional Relationships of Genes: Analysis of the Arabidopsis thaliana Subtilase Gene Family.

Author(s): Rautengarten | Steinhauser | Büssis | Stintzi | Schaller | Kopka | Altmann
Volume: 1
Issue: 4
Year: 2005
Modeling the amplification dynamics of human alu retrotransposons.

Author(s): Hedges Dale J | Cordaux Richard | Xing Jinchuan | Witherspoon David J | Rogers Alan R | Jorde Lynn B | Batzer Mark A
Volume: 1
Issue: 4
Year: 2005
Entropic stabilization of proteins and its proteomic consequences.

Author(s): Berezovsky Igor N | Chen William W | Choi Paul J | Shakhnovich Eugene I
Volume: 1
Issue: 4
Year: 2005
ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun.

Author(s): Li | Ye | Li | Wang | Han | Ye | Wang | Yang | Yu | Wong | Wang
Volume: 1
Issue: 4
Year: 2005
The human connectome: a structural description of the human brain.

Author(s): Sporns Olaf | Tononi Giulio | Kötter Rolf
Volume: 1
Issue: 4
Year: 2005
Prediction of Transcriptional Terminators in Bacillus subtilis and Related Species.

Author(s): de Hoon | Makita | Nakai | Miyano
Volume: 1
Issue: 3
Year: 2005
Evidence of a Double-Lid Movement in Pseudomonas aeruginosa Lipase: Insights from Molecular Dynamics Simulations.

Author(s): Cherukuvada | Seshasayee | Raghunathan | Anishetty | Pennathur
Volume: 1
Issue: 3
Year: 2005
Molecular origin of polyglutamine aggregation in neurodegenerative diseases.

Author(s): Khare Sagar D | Ding Feng | Gwanmesia Kenneth N | Dokholyan Nikolay V
Volume: 1
Issue: 3
Year: 2005
Evolution of genetic potential.

Author(s): Ancel Meyers Lauren | Ancel Fredric D | Lachmann Michael
Volume: 1
Issue: 3
Year: 2005
ISMB 2005 Conference Report.

Author(s): Morrison McKay B J
Volume: 1
Issue: 3
Year: 2005
Will a biological database be different from a biological journal?

Author(s): Bourne Philip
Volume: 1
Issue: 3
Year: 2005
Recognition of unknown conserved alternatively spliced exons.

Author(s): Ohler Uwe | Shomron Noam | Burge Christopher B
Volume: 1
Issue: 2
Year: 2005
Theoretical analysis of pre-receptor image conditioning in weakly electric fish.

Author(s): Migliaro Adriana | Caputi Angel A | Budelli Ruben
Volume: 1
Issue: 2
Year: 2005
Inflammatory aetiology of human myometrial activation tested using directed graphs.

Author(s): Bisits Andrew M | Smith Roger | Mesiano Sam | Yeo George | Kwek Kenneth | Macintyre David | Chan Eng C
Volume: 1
Issue: 2
Year: 2005
Molecular switches at the synapse emerge from receptor and kinase traffic.

Author(s): Hayer Arnold | Bhalla Upinder S
Volume: 1
Issue: 2
Year: 2005
The RNA silencing pathway: the bits and pieces that matter.

Author(s): Groenenboom Marian A C | Marée Athanasius F M | Hogeweg Paulien
Volume: 1
Issue: 2
Year: 2005
Combined evidence annotation of transposable elements in genome sequences.

Author(s): Quesneville Hadi | Bergman Casey M | Andrieu Olivier | Autard Delphine | Nouaud Danielle | Ashburner Michael | Anxolabehere Dominique
Volume: 1
Issue: 2
Year: 2005
Bioinformatics for whole-genome shotgun sequencing of microbial communities.

Author(s): Chen Kevin | Pachter Lior
Volume: 1
Issue: 2
Year: 2005
Computational ecology: from the complex to the simple and back.

Author(s): Pascual Mercedes
Volume: 1
Issue: 2
Year: 2005
Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model.

Author(s): Lunter | Ponting | Hein
Volume: 2
Issue: 1
Year: 2006
Unusual Intron Conservation near Tissue-Regulated Exons Found by Splicing Microarrays.

Author(s): Sugnet | Srinivasan | Clark | O'brien | Cline | Wang | Williams | Kulp | Blume | Haussler | Ares
Volume: 2
Issue: 1
Year: 2006
Extraction of transcript diversity from scientific literature.

Author(s): Shah Parantu K | Jensen Lars J | Boué Stéphanie | Bork Peer
Volume: 1
Issue: 1
Year: 2005
A phenomenological theory of spatially structured local synaptic connectivity.

Author(s): Amirikian Bagrat
Volume: 1
Issue: 1
Year: 2005
The Genomic Pattern of tDNA Operon Expression in E. coli.

Author(s): Ardell David H | Kirsebom Leif A
Volume: 1
Issue: 1
Year: 2005
microRNA Target Predictions across Seven Drosophila Species and Comparison to Mammalian Targets.

Author(s): Grün Dominic | Wang Yi-Lu | Langenberger David | Gunsalus Kristin C | Rajewsky Nikolaus
Volume: 1
Issue: 1
Year: 2005
What makes ribosome-mediated transcriptional attenuation sensitive to amino Acid limitation?

Author(s): Elf Johan | Ehrenberg Måns
Volume: 1
Issue: 1
Year: 2005
Predicting functional gene links from phylogenetic-statistical analyses of whole genomes.

Author(s): Barker Daniel | Pagel Mark
Volume: 1
Issue: 1
Year: 2005
Combinatorial Pattern Discovery Approach for the Folding Trajectory Analysis of a beta-Hairpin.

Author(s): Parida Laxmi | Zhou Ruhong
Volume: 1
Issue: 1
Year: 2005
Long-Range Periodic Patterns in Microbial Genomes Indicate Significant Multi-Scale Chromosomal Organization.

Author(s): Allen | Price | Joyce | Palsson
Volume: 2
Issue: 1
Year: 2006
Ab initio prediction of transcription factor targets using structural knowledge.

Author(s): Kaplan Tommy | Friedman Nir | Margalit Hanah
Volume: 1
Issue: 1
Year: 2005
PLoS Computational Biology: A New Community Journal.

Author(s): Bourne Philip E | Brenner Steven E | Eisen Michael B
Volume: 1
Issue: 1
Year: 2005
An open forum for computational biology.

Author(s): Gribskov Michael
Volume: 1
Issue: 1
Year: 2005
"Antedisciplinary" science.

Author(s): Eddy Sean R
Volume: 1
Issue: 1
Year: 2005
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