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International Journal of Plant Genomics

ISSN: 1687--5370
Publisher: Hindawi Publishing Corporation


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Phylogenetic, Molecular, and Biochemical Characterization of Caffeic Acid o-Methyltransferase Gene Family in Brachypodium distachyon

Author(s): Xianting Wu | Jiajie Wu | Yangfan Luo | Jennifer Bragg | Olin Anderson | John Vogel | Yong Q. Gu
Volume: 2013
Year: 2013
SNP Markers and Their Impact on Plant Breeding

Author(s): Jafar Mammadov | Rajat Aggarwal | Ramesh Buyyarapu | Siva Kumpatla
Volume: 2012
Year: 2012
Application of Phosphoproteomics to Find Targets of Casein Kinase 1 in the Flagellum of Chlamydomonas

Author(s): Jens Boesger | Volker Wagner | Wolfram Weisheit | Maria Mittag
Volume: 2012
Year: 2012
Molecular Breeding to Improve Salt Tolerance of Rice (Oryza sativa L.) in the Red River Delta of Vietnam

Author(s): Le Hung Linh | Ta Hong Linh | Tran Dang Xuan | Le Huy Ham | Abdelbagi M. Ismail | Tran Dang Khanh
Volume: 2012
Year: 2012
Evolutionary and Molecular Aspects of Indian Tomato Leaf Curl Virus Coat Protein

Author(s): Sivakumar Prasanth Kumar | Saumya K. Patel | Ravi G. Kapopara | Yogesh T. Jasrai | Himanshu A. Pandya
Volume: 2012
Year: 2012
SNP Discovery through Next-Generation Sequencing and Its Applications

Author(s): Santosh Kumar | Travis W. Banks | Sylvie Cloutier
Volume: 2012
Year: 2012
Gel-Based and Gel-Free Quantitative Proteomics Approaches at a Glance

Author(s): Cosette Abdallah | Eliane Dumas-Gaudot | Jenny Renaut | Kjell Sergeant
Volume: 2012
Year: 2012
Mapping of Micro-Tom BAC-End Sequences to the Reference Tomato Genome Reveals Possible Genome Rearrangements and Polymorphisms

Author(s): Erika Asamizu | Kenta Shirasawa | Hideki Hirakawa | Shusei Sato | Satoshi Tabata | Kentaro Yano | Tohru Ariizumi | Daisuke Shibata | Hiroshi Ezura
Volume: 2012
Year: 2012
Advances towards a Marker-Assisted Selection Breeding Program in Prairie Cordgrass, a Biomass Crop

Author(s): K. R. Gedye | J. L. Gonzalez-Hernandez | V. Owens | A. Boe
Volume: 2012
Year: 2012
Local Assemblies of Paired-End Reduced Representation Libraries Sequenced with the Illumina Genome Analyzer in Maize

Author(s): Stéphane Deschamps | Kishore Nannapaneni | Yun Zhang | Kevin Hayes
Volume: 2012
Year: 2012
A Cotton-Fiber-Associated Cyclin-Dependent Kinase A Gene: Characterization and Chromosomal Location

Author(s): Weifan Gao | Sukumar Saha | Din-Pow Ma | Yufang Guo | Johnie N. Jenkins | David M. Stelly
Volume: 2012
Year: 2012
Evolutionary History of LTR Retrotransposon Chromodomains in Plants

Author(s): Anton Novikov | Georgiy Smyshlyaev | Olga Novikova
Volume: 2012
Year: 2012
A Bayesian Framework for Functional Mapping through Joint Modeling of Longitudinal and Time-to-Event Data

Author(s): Kiranmoy Das | Runze Li | Zhongwen Huang | Junyi Gai | Rongling Wu
Volume: 2012
Year: 2012
A Pair of Partially Overlapping Arabidopsis Genes with Antagonistic Circadian Expression

Author(s): Andrea Kunova | Elena Zubko | Peter Meyer
Volume: 2012
Year: 2012
Chromosomal Location of HCA1 and HCA2, Hybrid Chlorosis Genes in Rice

Author(s): Katsuyuki Ichitani | Yuma Takemoto | Kotaro Iiyama | Satoru Taura | Muneharu Sato
Volume: 2012
Year: 2012
Methylation, Transcription, and Rearrangements of Transposable Elements in Synthetic Allopolyploids

Author(s): Beery Yaakov | Khalil Kashkush
Volume: 2011
Year: 2011
Genes Encoding Callose Synthase and Phytochrome A Are Adjacent to a MAP3Kα-Like Gene in Beta vulgaris US H20

Author(s): L. David Kuykendall | Jonathan Y. Shao
Volume: 2011
Year: 2011
Differential Expression of Three Flavanone 3-Hydroxylase Genes in Grains and Coleoptiles of Wheat

Author(s): Eiko Himi | Masahiko Maekawa | Kazuhiko Noda
Volume: 2011
Year: 2011
Poor Homologous Synapsis 1 Interacts with Chromatin but Does Not Colocalise with ASYnapsis 1 during Early Meiosis in Bread Wheat

Author(s): Kelvin H. P. Khoo | Amanda J. Able | Jason A. Able
Volume: 2012
Year: 2012
POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data

Author(s): Ethalinda K. S. Cannon | Scott M. Birkett | Bremen L. Braun | Sateesh Kodavali | Douglas M. Jennewein | Alper Yilmaz | Valentin Antonescu | Corina Antonescu | Lisa C. Harper | Jack M. Gardiner | Mary L. Schaeffer | Darwin A. Campbell | Carson M. Andorf | Destri Andorf | Damon Lisch | Karen E. Koch | Donald R. McCarty | John Quackenbush | Erich Grotewold | Carol M. Lushbough | Taner Z. Sen | Carolyn J. Lawrence
Volume: 2011
Year: 2011
Development of New Candidate Gene and EST-Based Molecular Markers for Gossypium Species

Author(s): Ramesh Buyyarapu | Ramesh V. Kantety | John Z. Yu | Sukumar Saha | Govind C. Sharma
Volume: 2011
Year: 2011
Mutations in Lettuce Improvement

Author(s): Beiquan Mou
Volume: 2011
Year: 2011
Mutagenesis as a Tool in Plant Genetics, Functional Genomics, and Breeding

Author(s): Per Sikora | Aakash Chawade | Mikael Larsson | Johanna Olsson | Olof Olsson
Volume: 2011
Year: 2011
Chromosome Visualization Tool: A Whole Genome Viewer

Author(s): Ethalinda K. S. Cannon | Steven B. Cannon
Volume: 2011
Year: 2011
How to Group Genes according to Expression Profiles?

Author(s): Julio A. Di Rienzo | Silvia G. Valdano | Paula Fernández
Volume: 2011
Year: 2011
PPNEMA: A Resource of Plant-Parasitic Nematodes Multialigned Ribosomal Cistrons

Author(s): Francesco Rubino | Amalia Voukelatou | Francesca De Luca | Carla De Giorgi | Marcella Attimonelli
Volume: 2008
Year: 2008
MaizeGDB: The Maize Model Organism Database for Basic, Translational, and Applied Research

Author(s): Carolyn J. Lawrence | Lisa C. Harper | Mary L. Schaeffer | Taner Z. Sen | Trent E. Seigfried | Darwin A. Campbell
Volume: 2008
Year: 2008
TreeGenes: A Forest Tree Genome Database

Author(s): Jill L. Wegrzyn | Jennifer M. Lee | Brandon R. Tearse | David B. Neale
Volume: 2008
Year: 2008
SSR Locator: Tool for Simple Sequence Repeat Discovery Integrated with Primer Design and PCR Simulation

Author(s): Luciano Carlos da Maia | Dario Abel Palmieri | Velci Queiroz de Souza | Mauricio Marini Kopp | Fernando Irajá Félix de Carvalho | Antonio Costa de Oliveira
Volume: 2008
Year: 2008
Development in Rice Genome Research Based on Accurate Genome Sequence

Author(s): Takashi Matsumoto | Jianzhong Wu | Baltazar A. Antonio | Takuji Sasaki
Volume: 2008
Year: 2008
Coe1 in Beta vulgaris L. Has a Tnp2-Domain DNA Transposase Gene within Putative LTRs and Other Retroelement-Like Features

Author(s): David Kuykendall | Jonathan Shao | Kenneth Trimmer
Volume: 2008
Year: 2008
Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources

Author(s): Ibrokhim Y. Abdurakhmonov | Abdusattor Abdukarimov
Volume: 2008
Year: 2008
Rice Molecular Breeding Laboratories in the Genomics Era: Current Status and Future Considerations

Author(s): Bert C. Y. Collard | Casiana M. Vera Cruz | Kenneth L. McNally | Parminder S. Virk | David J. Mackill
Volume: 2008
Year: 2008
Wheat Genomics: Present Status and Future Prospects

Author(s): P. K. Gupta | R. R. Mir | A. Mohan | J. Kumar
Volume: 2008
Year: 2008
Citrus Genomics

Author(s): Manuel Talon | Fred G. Gmitter
Volume: 2008
Year: 2008
The Generation Challenge Programme Platform: Semantic Standards and Workbench for Crop Science

Author(s): Richard Bruskiewich | Martin Senger | Guy Davenport | Manuel Ruiz | Mathieu Rouard | Tom Hazekamp | Masaru Takeya | Koji Doi | Kouji Satoh | Marcos Costa | Reinhard Simon | Jayashree Balaji | Akinnola Akintunde | Ramil Mauleon | Samart Wanchana | Trushar Shah | Mylah Anacleto | Arllet Portugal | Victor Jun Ulat | Supat Thongjuea | Kyle Braak | Sebastian Ritter | Alexis Dereeper | Milko Skofic | Edwin Rojas | Natalia Martins | Georgios Pappas | Ryan Alamban | Roque Almodiel | Lord Hendrix Barboza | Jeffrey Detras | Kevin Manansala | Michael Jonathan Mendoza | Jeffrey Morales | Barry Peralta | Rowena Valerio | Yi Zhang | Sergio Gregorio | Joseph Hermocilla | Michael Echavez | Jan Michael Yap | Andrew Farmer | Gary Schiltz | Jennifer Lee | Terry Casstevens | Pankaj Jaiswal | Ayton Meintjes | Mark Wilkinson | Benjamin Good | James Wagner | Jane Morris | David Marshall | Anthony Collins | Shoshi Kikuchi | Thomas Metz | Graham McLaren | Theo van Hintum
Volume: 2008
Year: 2008
Phylogenetic Analyses: A Toolbox Expanding towards Bayesian Methods

Author(s): Stéphane Aris-Brosou | Xuhua Xia
Volume: 2008
Year: 2008
Blast2GO: A Comprehensive Suite for Functional Analysis in Plant Genomics

Author(s): Ana Conesa | Stefan Götz
Volume: 2008
Year: 2008
Genomics of Sorghum

Author(s): Andrew H. Paterson
Volume: 2008
Year: 2008
Barley Genomics: An Overview

Author(s): Nese Sreenivasulu | Andreas Graner | Ulrich Wobus
Volume: 2008
Year: 2008
Brachypodium Genomics

Author(s): Bahar Sogutmaz Ozdemir | Pilar Hernandez | Ertugrul Filiz | Hikmet Budak
Volume: 2008
Year: 2008
Structural and Functional Genomics of Tomato

Author(s): Amalia Barone | Maria Luisa Chiusano | Maria Raffaella Ercolano | Giovanni Giuliano | Silvana Grandillo | Luigi Frusciante
Volume: 2008
Year: 2008
Progress in Understanding and Sequencing the Genome of Brassica rapa

Author(s): Chang Pyo Hong | Soo-Jin Kwon | Jung Sun Kim | Tae-Jin Yang | Beom-Seok Park | Yong Pyo Lim
Volume: 2008
Year: 2008
Recent Advances in Cotton Genomics

Author(s): Hong-Bin Zhang | Yaning Li | Baohua Wang | Peng W. Chee
Volume: 2008
Year: 2008
Sugarcane Functional Genomics: Gene Discovery for Agronomic Trait Development

Author(s): M. Menossi | M. C. Silva-Filho | M. Vincentz | M.-A. Van-Sluys | G. M. Souza
Volume: 2008
Year: 2007
Bayesian Mixture Model Analysis for Detecting Differentially Expressed Genes

Author(s): Zhenyu Jia | Shizhong Xu
Volume: 2008
Year: 2008
Common QTL Affect the Rate of Tomato Seed Germination under Different Stress and Nonstress Conditions

Author(s): Majid R. Foolad | Prakash Subbiah | Liping Zhang
Volume: 2007
Year: 2008
Generation and Screening of a BAC Library from a Diploid Potato Clone to Unravel Durable Late Blight Resistance on Linkage Group IV

Author(s): Ingo Hein | Karen McLean | Boulos Chalhoub | Glenn J. Bryan
Volume: 2007
Year: 2007
Temporal Gene Expression Profiling of the Wheat Leaf Rust Pathosystem Using cDNA Microarray Reveals Differences in Compatible and Incompatible Defence Pathways

Author(s): Bourlaye Fofana | Travis W. Banks | Brent McCallum | Stephen E. Strelkov | Sylvie Cloutier
Volume: 2007
Year: 2007
Genome Mapping and Molecular Breeding of Tomato

Author(s): Majid R. Foolad
Volume: 2007
Year: 2007
Evaluation of Global RNA Amplification and Its Use for High-Throughput Transcript Analysis of Laser-Microdissected Endosperm

Author(s): Robert C. Day | Les McNoe | Richard C. Macknight
Volume: 2007
Year: 2007
A Solution for Universal Classification of Species Based on Genomic DNA

Author(s): Mariko Kouduka | Daisuke Sato | Manabu Komori | Motohiro Kikuchi | Kiyoshi Miyamoto | Akinori Kosaku | Mohammed Naimuddin | Atsushi Matsuoka | Koichi Nishigaki
Volume: 2007
Year: 2007
Significance Test and Genome Selection in Bayesian Shrinkage Analysis

Author(s): Xiaohong Che | Shizhong Xu
Volume: 2010
Year: 2010
Transcriptomic Analysis of Starch Biosynthesis in the Developing Grain of Hexaploid Wheat

Author(s): Boryana S. Stamova | Debbie Laudencia-Chingcuanco | Diane M. Beckles
Volume: 2009
Year: 2009
Reproducible RNA Preparation from Sugarcane and Citrus for Functional Genomic Applications

Author(s): Mona B. Damaj | Phillip D. Beremand | Marco T. Buenrostro-Nava | Beth Riedel | Joe J. Molina | Siva P. Kumpatla | Terry L. Thomas | T. Erik Mirkov
Volume: 2009
Year: 2009
PROC QTL—A SAS Procedure for Mapping Quantitative Trait Loci

Author(s): Zhiqiu Hu | Shizhong Xu
Volume: 2009
Year: 2009
STIFDB—Arabidopsis Stress Responsive Transcription Factor DataBase

Author(s): K. Shameer | S. Ambika | Susan Mary Varghese | N. Karaba | M. Udayakumar | R. Sowdhamini
Volume: 2009
Year: 2009
Structural Characterization and Expression Analysis of the SERK/SERL Gene Family in Rice (Oryza sativa)

Author(s): Bhumica Singla | Jitendra P. Khurana | Paramjit Khurana
Volume: 2009
Year: 2009
Advances in Maize Genomics and Their Value for Enhancing Genetic Gains from Breeding

Author(s): Yunbi Xu | Debra J. Skinner | Huixia Wu | Natalia Palacios-Rojas | Jose Luis Araus | Jianbing Yan | Shibin Gao | Marilyn L. Warburton | Jonathan H. Crouch
Volume: 2009
Year: 2009
QTL Mapping of a High Protein Digestibility Trait in Sorghum bicolor

Author(s): Jennifer A. Winn | R. Esten Mason | Adriana L. Robbins | William L. Rooney | Dirk B. Hays
Volume: 2009
Year: 2009
Analysis of Gene Expression Profiles in Leaf Tissues of Cultivated Peanuts and Development of EST-SSR Markers and Gene Discovery

Author(s): Baozhu Guo | Xiaoping Chen | Yanbin Hong | Xuanqiang Liang | Phat Dang | Tim Brenneman | Corley Holbrook | Albert Culbreath
Volume: 2009
Year: 2009
Agrobacterium-Mediated Gene Transfer to Cereal Crop Plants: Current Protocols for Barley, Wheat, Triticale, and Maize

Author(s): Goetz Hensel | Christine Kastner | Sylwia Oleszczuk | Jan Riechen | Jochen Kumlehn
Volume: 2009
Year: 2009
Methodologies for In Vitro Cloning of Small RNAs and Application for Plant Genome(s)

Author(s): Eric J. Devor | Lingyan Huang | Abdusattor Abdukarimov | Ibrokhim Y. Abdurakhmonov
Volume: 2009
Year: 2009
Virus-Induced Gene Silencing, a Post Transcriptional Gene Silencing Method

Author(s): Turgay Unver | Hikmet Budak
Volume: 2009
Year: 2009
Estimating the Broad-Sense Heritability of Early Growth of Cowpea

Author(s): Nicole W. Xu | Shizhong Xu | Jeff Ehlers
Volume: 2009
Year: 2009
A Nest of LTR Retrotransposons Adjacent the Disease Resistance-Priming Gene NPR1 in Beta vulgaris L. U.S. Hybrid H20

Author(s): David Kuykendall | Jonathan Shao | Kenneth Trimmer
Volume: 2009
Year: 2009
A Solanum lycopersicum×Solanum pimpinellifolium Linkage Map of Tomato Displaying Genomic Locations of R-Genes, RGAs, and Candidate Resistance/Defense-Response ESTs

Author(s): Arun Sharma | Liping Zhang | David Niño-Liu | Hamid Ashrafi | Majid R. Foolad
Volume: 2008
Year: 2009
Genomic Resources and Tools for Gene Function Analysis in Potato

Author(s): Glenn J. Bryan | Ingo Hein
Volume: 2008
Year: 2008
Cross-Chip Probe Matching Tool: A Web-Based Tool for Linking Microarray Probes within and across Plant Species

Author(s): Ruchi Ghanekar | Vinodh Srinivasasainagendra | Grier P. Page
Volume: 2008
Year: 2008
Marker-Assisted Breeding as Next-Generation Strategy for Genetic Improvement of Productivity and Quality: Can It Be Realized in Cotton?

Author(s): N. Manikanda Boopathi | K. Thiyagu | B. Urbi | M. Santhoshkumar | A. Gopikrishnan | S. Aravind | Gat Swapnashri | R. Ravikesavan
Volume: 2011
Year: 2011
Proteomic Analysis of Soybean Roots under Aluminum Stress

Author(s): Dechassa Duressa | Khairy Soliman | Robert Taylor | Zachary Senwo
Volume: 2011
Year: 2011
EM Algorithm for Mapping Quantitative Trait Loci in Multivalent Tetraploids

Author(s): Jiahan Li | Kiranmoy Das | Guifang Fu | Chunfa Tong | Yao Li | Christian Tobias | Rongling Wu
Volume: 2010
Year: 2010
Identification of Aluminum Responsive Genes in Al-Tolerant Soybean Line PI 416937

Author(s): Dechassa Duressa | Khairy Soliman | Dongquan Chen
Volume: 2010
Year: 2010
Mapping Quantitative Trait Loci Using Distorted Markers

Author(s): Shizhong Xu | Zhiqiu Hu
Volume: 2009
Year: 2009
Techniques to Study Autophagy in Plants

Author(s): Géraldine Mitou | Hikmet Budak | Devrim Gozuacik
Volume: 2009
Year: 2009
Heterelogous Expression of Plant Genes

Author(s): Filiz Yesilirmak | Zehra Sayers
Volume: 2009
Year: 2009
Statistical Methods for Mapping Multiple QTL

Author(s): Wei Zou | Zhao-Bang Zeng
Volume: 2008
Year: 2008
Bayesian Functional Data Clustering for Temporal Microarray Data

Author(s): Ping Ma | Wenxuan Zhong | Yang Feng | Jun S. Liu
Volume: 2008
Year: 2008
An Empirical Bayesian Method for Detecting Differentially Expressed Genes Using EST Data

Author(s): Na You | Junmei Liu | Chang Xuan Mao
Volume: 2008
Year: 2008
Recent Advances in Medicago truncatula Genomics

Author(s): Jean-Michel Ané | Hongyan Zhu | Julia Frugoli
Volume: 2008
Year: 2007
Wet Laboratory Tools Widely Used in Plant Genomics

Author(s): Hikmet Budak | Hongbin Zhang | Pushpendra K. Gupta | Boulos Chalhoub | Andrew James | Chunji Liu
Volume: 2009
Year: 2009
Bioinformatics Tools for Plant Genomics

Author(s): Gary R. Skuse | Chunguang Du
Volume: 2008
Year: 2008
Plant Genomics

Author(s): P. K. Gupta | Yunbi Xu
Volume: 2008
Year: 2009
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