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Journal of Biological Engineering

ISSN: 1754--1611
Publisher: BioMed Central


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Portable bacterial identification system based on elastic light scatter patterns

Author(s): Bae Euiwon | Ying Dawei | Kramer Donald | Patsekin Valery | Rajwa Bartek | Holdman Cheryl | Sturgis Jennifer | Davisson V | Robinson J
Volume: 6
Issue: 1
Year: 2012
Development of a modified Respiration Activity Monitoring System for accurate and highly resolved measurement of respiration activity in shake flask fermentations

Author(s): Hansen Sven | Hariskos Ioanna | Luchterhand Bettina | Büchs Jochen
Volume: 6
Issue: 1
Year: 2012
Temperature dependence of ssrA-tag mediated protein degradation

Author(s): Purcell Oliver | Grierson Claire S | Bernardo Mario | Savery Nigel J
Volume: 6
Issue: 1
Year: 2012
Amplified insert assembly: an optimized approach to standard assembly of BioBrickTM genetic circuits

Author(s): Speer Michael A | Richard Tom L
Volume: 5
Issue: 1
Year: 2011
Detection and quantification of poliovirus infection using FTIR spectroscopy and cell culture

Author(s): Lee-Montiel Felipe T | Reynolds Kelly A | Riley Mark R
Volume: 5
Issue: 1
Year: 2011
Parametric analysis of a novel semi-circular microfluidic CD-ELISA valve

Author(s): Lin Samuel
Volume: 5
Issue: 1
Year: 2011
BglBrick vectors and datasheets: A synthetic biology platform for gene expression

Author(s): Lee Taek | Krupa Rachel A | Zhang Fuzhong | Hajimorad Meghdad | Holtz William J | Prasad Nilu | Lee Sung | Keasling Jay D
Volume: 5
Issue: 1
Year: 2011
Polarized light based scheme to monitor column performance in a continuous foam fractionation column

Author(s): Swamy Janakiraman N | Crofcheck Czarena L | Mengüç MP
Volume: 4
Issue: 1
Year: 2010
Measuring the activity of BioBrick promoters using an in vivo reference standard

Author(s): Kelly Jason R | Rubin Adam J | Davis Joseph H | Ajo-Franklin Caroline M | Cumbers John | Czar Michael J | de Mora Kim | Glieberman Aaron L | Monie Dileep D | Endy Drew
Volume: 3
Issue: 1
Year: 2009
A co-fermentation strategy to consume sugar mixtures effectively

Author(s): Eiteman Mark A | Lee Sarah A | Altman Elliot
Volume: 2
Issue: 1
Year: 2008
Measuring variability in trophic status in the Lake Waco/Bosque River Watershed

Author(s): Rodriguez Angela D | Matlock Marty D
Volume: 2
Issue: 1
Year: 2008
Development of a Cryptosporidium oocyst assay using an automated fiber optic-based biosensor

Author(s): Kramer Marianne F | Vesey Graham | Look Natasha L | Herbert Ben R | Simpson-Stroot Joyce M | Lim Daniel V
Volume: 1
Issue: 1
Year: 2007
2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts

Author(s): Leguia Mariana | Brophy Jennifer AN | Densmore Douglas | Asante Angel | Anderson J Christopher
Volume: 7
Issue: 1
Year: 2013
A genetic bistable switch utilizing nonlinear protein degradation

Author(s): Huang Daniel | Holtz William J | Maharbiz Michel M
Volume: 6
Issue: 1
Year: 2012
A BioBrick compatible strategy for genetic modification of plants

Author(s): Boyle Patrick M | Burrill Devin R | Inniss Mara C | Agapakis Christina M | Deardon Aaron | DeWerd Jonathan G | Gedeon Michael A | Quinn Jacqueline Y | Paull Morgan L | Raman Anugraha M | Theilmann Mark R | Wang Lu | Winn Julia C | Medvedik Oliver | Schellenberg Kurt | Haynes Karmella A | Viel Alain | Brenner Tamara J | Church George M | Shah Jagesh V | Silver Pamela A
Volume: 6
Issue: 1
Year: 2012
Strategies for ocular siRNA delivery: Potential and limitations of non-viral nanocarriers

Author(s): Thakur Ajit | Fitzpatrick Scott | Zaman Abeyat | Kugathasan Kapilan | Muirhead Ben | Hortelano Gonzalo | Sheardown Heather
Volume: 6
Issue: 1
Year: 2012
Employment of a noninvasive magnetic method for evaluation of gastrointestinal transit in rats

Author(s): Quini Caio C | Américo Madileine F | Corá Luciana A | Calabresi Marcos FF | Alvarez Matheus | Oliveira Ricardo B | Miranda Jose Ricardo A
Volume: 6
Issue: 1
Year: 2012
Effect of tumor shape and size on drug delivery to solid tumors

Author(s): Soltani M | Chen Pu
Volume: 6
Issue: 1
Year: 2012
Computational identification of adaptive mutants using the VERT system

Author(s): Winkler James | Kao Katy C
Volume: 6
Issue: 1
Year: 2012
A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli

Author(s): Dragosits Martin | Nicklas Daniel | Tagkopoulos Ilias
Volume: 6
Issue: 1
Year: 2012
Directed evolution of bright mutants of an oxygen-independent flavin-binding fluorescent protein from Pseudomonas putida

Author(s): Mukherjee Arnab | Weyant Kevin B | Walker Joshua | Schroeder Charles M
Volume: 6
Issue: 1
Year: 2012
DeviceEditor visual biological CAD canvas

Author(s): Chen Joanna | Densmore Douglas | Ham Timothy S | Keasling Jay D | Hillson Nathan J
Volume: 6
Issue: 1
Year: 2012
Affinity for, and localization of, PEG-functionalized silica nanoparticles to sites of damage in an ex vivo spinal cord injury model

Author(s): Chen Bojun | Zuberi Mahvash | Borgens Richard Ben | Cho Youngnam
Volume: 6
Issue: 1
Year: 2012
The role of surface chemistry-induced cell characteristics on nonviral gene delivery to mouse fibroblasts

Author(s): Kasputis Tadas | Pannier Angela K
Volume: 6
Issue: 1
Year: 2012
Engineered cell-cell communication via DNA messaging

Author(s): Ortiz Monica E | Endy Drew
Volume: 6
Issue: 1
Year: 2012
The Constructor: a web application optimizing cloning strategies based on modules from the registry of standard biological parts

Author(s): Hesselman Matthijn C | Koehorst Jasper J | Slijkhuis Thijs | Odoni Dorett I | Hugenholtz Floor | van Passel Mark W J
Volume: 6
Issue: 1
Year: 2012
Evolutionary principles and synthetic biology: avoiding a molecular tragedy of the commons with an engineered phage

Author(s): Gladstone Eric G | Molineux Ian J | Bull James J
Volume: 6
Issue: 1
Year: 2012
Word selection affects perceptions of synthetic biology

Author(s): Pearson Brianna | Snell Sam | Bye-Nagel Kyri | Tonidandel Scott | Heyer Laurie | Campbell A Malcolm
Volume: 5
Issue: 1
Year: 2011
A synthetic system links FeFe-hydrogenases to essential E. coli sulfur metabolism

Author(s): Barstow Buz | Agapakis Christina | Boyle Patrick | Grandl Gerald | Silver Pamela | Wintermute Edwin
Volume: 5
Issue: 1
Year: 2011
Characterization of a synthetic bacterial self-destruction device for programmed cell death and for recombinant proteins release

Author(s): Pasotti Lorenzo | Zucca Susanna | Lupotto Manuel | Cusella De Angelis Maria | Magni Paolo
Volume: 5
Issue: 1
Year: 2011
System Integration - A Major Step toward Lab on a Chip

Author(s): Sin Mandy | Gao Jian | Liao Joseph | Wong Pak
Volume: 5
Issue: 1
Year: 2011
Iron specificity of a biosensor based on fluorescent pyoverdin immobilized in sol-gel glass

Author(s): Yoder Michael | Kisaalita William
Volume: 5
Issue: 1
Year: 2011
A Metabolic Biofuel Cell: Conversion of Human Leukocyte Metabolic Activity to Electrical Currents

Author(s): Justin Gusphyl | Zhang Yingze | Cui X Tracy | Bradberry Charles | Sun Mingui | Sclabassi Robert
Volume: 5
Issue: 1
Year: 2011
A framework and model system to investigate linear system behavior in Escherichia coli

Author(s): Hajimorad Meghdad | Gray Paul | Keasling Jay
Volume: 5
Issue: 1
Year: 2011
Rapid optimization of gene dosage in E. coli using DIAL strains

Author(s): Kittleson Joshua | Cheung Sherine | Anderson J Christopher
Volume: 5
Issue: 1
Year: 2011
Regeneration of Centella asiatica plants from non-embryogenic cell lines and evaluation of antibacterial and antifungal properties of regenerated calli and plants

Author(s): Bibi Yamin | Zia Muhammad | Nisa Sobia | Habib Darima | Waheed Abdul | Chaudhary Fayyaz
Volume: 5
Issue: 1
Year: 2011
Stink Bug Feeding Induces Fluorescence in Developing Cotton Bolls

Author(s): Xia Jinjun | Mustafic Adnan | Toews Michael | Haidekker Mark
Volume: 5
Issue: 1
Year: 2011
Characterization of seed nuclei in glucagon aggregation using light scattering methods and field-flow fractionation

Author(s): Hoppe Cindy | Nguyen Lida | Kirsch Lee | Wiencek John
Volume: 2
Issue: 1
Year: 2008
Engineering bacteria to solve the Burnt Pancake Problem

Author(s): Haynes Karmella | Broderick Marian | Brown Adam | Butner Trevor | Dickson James | Harden W Lance | Heard Lane | Jessen Eric | Malloy Kelly | Ogden Brad | Rosemond Sabriya | Simpson Samantha | Zwack Erin | Campbell A Malcolm | Eckdahl Todd | Heyer Laurie | Poet Jeffrey
Volume: 2
Issue: 1
Year: 2008
Effects of Dielectrophoresis on Growth, Viability and Immuno-reactivity of Listeria monocytogenes

Author(s): Yang Liju | Banada Padmapriya | Bhunia Arun | Bashir Rashid
Volume: 2
Issue: 1
Year: 2008
Engineering BioBrick vectors from BioBrick parts

Author(s): Shetty Reshma | Endy Drew | Knight Thomas
Volume: 2
Issue: 1
Year: 2008
Cellular automata simulation of topological effects on the dynamics of feed-forward motifs

Author(s): Apte Advait | Cain John | Bonchev Danail | Fong Stephen
Volume: 2
Issue: 1
Year: 2008
Fractionation of the rice bran layer and quantification of vitamin E, oryzanol, protein, and rice bran saccharide

Author(s): Schramm Rebecca | Abadie Alicia | Hua Na | Xu Zhimin | Lima Marybeth
Volume: 1
Issue: 1
Year: 2007
Engineering education in the wake of hurricane Katrina

Author(s): Lima Marybeth
Volume: 1
Issue: 1
Year: 2007
Amyloglucosidase enzymatic reactivity inside lipid vesicles

Author(s): Li Mian | Hanford Michael | Kim Jin-Woo | Peeples Tonya
Volume: 1
Issue: 1
Year: 2007
Electrospun nitrocellulose and nylon: Design and fabrication of novel high performance platforms for protein blotting applications

Author(s): Manis Ashley | Bowman James | Bowlin Gary | Simpson David
Volume: 1
Issue: 1
Year: 2007
Introduction of customized inserts for streamlined assembly and optimization of BioBrick synthetic genetic circuits

Author(s): Norville Julie | Derda Ratmir | Gupta Saurabh | Drinkwater Kelly | Belcher Angela | Leschziner Andres | Knight Thomas
Volume: 4
Issue: 1
Year: 2010
Production of lentiviral vectors with enhanced efficiency to target dendritic cells by attenuating mannosidase activity of mammalian cells

Author(s): Tai April | Froelich Steven | Joo Kye-Il | Wang Pin
Volume: 5
Issue: 1
Year: 2011
Biocoder: A programming language for standardizing and automating biology protocols

Author(s): Ananthanarayanan Vaishnavi | Thies William
Volume: 4
Issue: 1
Year: 2010
Designing and engineering evolutionary robust genetic circuits

Author(s): Sleight Sean | Bartley Bryan | Lieviant Jane | Sauro Herbert
Volume: 4
Issue: 1
Year: 2010
A synthetic three-color scaffold for monitoring genetic regulation and noise

Author(s): Cox Robert | Dunlop Mary | Elowitz Michael
Volume: 4
Issue: 1
Year: 2010
Efficient cell-free expression with the endogenous E. Coli RNA polymerase and sigma factor 70

Author(s): Shin Jonghyeon | Noireaux Vincent
Volume: 4
Issue: 1
Year: 2010
Study of messenger RNA inactivation and protein degradation in an Escherichia coli cell-free expression system

Author(s): Shin Jonghyeon | Noireaux Vincent
Volume: 4
Issue: 1
Year: 2010
A modular positive feedback-based gene amplifier

Author(s): Nistala Goutam | Wu Kang | Rao Christopher | Bhalerao Kaustubh
Volume: 4
Issue: 1
Year: 2010
Insulation of a synthetic hydrogen metabolism circuit in bacteria

Author(s): Agapakis Christina | Ducat Daniel | Boyle Patrick | Wintermute Edwin | Way Jeffrey | Silver Pamela
Volume: 4
Issue: 1
Year: 2010
BglBricks: A flexible standard for biological part assembly

Author(s): Anderson J Christopher | Dueber John | Leguia Mariana | Wu Gabriel | Goler Jonathan | Arkin Adam | Keasling Jay
Volume: 4
Issue: 1
Year: 2010
Chitosan nanoparticle-based neuronal membrane sealing and neuroprotection following acrolein-induced cell injury

Author(s): Cho Youngnam | Shi Riyi | Ben Borgens Richard
Volume: 4
Issue: 1
Year: 2010
Antimicrobial effect of silver-impregnated cellulose: potential for antimicrobial therapy

Author(s): Kim Juyoung | Kwon Soonjo | Ostler Erik
Volume: 3
Issue: 1
Year: 2009
Fluorometric determination of ethidium bromide efflux kinetics in Escherichia coli

Author(s): Paixão Laura | Rodrigues Liliana | Couto Isabel | Martins Marta | Fernandes Pedro | de Carvalho Carla | Monteiro Gabriel | Sansonetty Filipe | Amaral Leonard | Viveiros Miguel
Volume: 3
Issue: 1
Year: 2009
TinkerCell: modular CAD tool for synthetic biology

Author(s): Chandran Deepak | Bergmann Frank | Sauro Herbert
Volume: 3
Issue: 1
Year: 2009
Transcriptional effects of CRP* expression in Escherichia coli

Author(s): Khankal Reza | Chin Jonathan | Ghosh Debashis | Cirino Patrick
Volume: 3
Issue: 1
Year: 2009
Engineering and validation of a novel lipid thin film for biomembrane modeling in lipophilicity determination of drugs and xenobiotics

Author(s): Idowu Sunday | Adeyemo Morenikeji | Ogbonna Udochi
Volume: 3
Issue: 1
Year: 2009
Puncture mechanics of cnidarian cnidocysts: a natural actuator

Author(s): Oppegard Shawn | Anderson Peter | Eddington David
Volume: 3
Issue: 1
Year: 2009
Solving a Hamiltonian Path Problem with a bacterial computer

Author(s): Baumgardner Jordan | Acker Karen | Adefuye Oyinade | Crowley Samuel | DeLoache Will | Dickson James | Heard Lane | Martens Andrew | Morton Nickolaus | Ritter Michelle | Shoecraft Amber | Treece Jessica | Unzicker Matthew | Valencia Amanda | Waters Mike | Campbell A Malcolm | Heyer Laurie | Poet Jeffrey | Eckdahl Todd
Volume: 3
Issue: 1
Year: 2009
Enhanced production of bacterial cellulose by using a biofilm reactor and its material property analysis

Author(s): Cheng Kuan-Chen | Catchmark Jeff | Demirci Ali
Volume: 3
Issue: 1
Year: 2009
Antimicrobial activities of commercial nanoparticles against an environmental soil microbe, Pseudomonas putida KT2440

Author(s): Gajjar Priyanka | Pettee Brian | Britt David | Huang Wenjie | Johnson William | Anderson Anne
Volume: 3
Issue: 1
Year: 2009
Soluble aggregates of the amyloid-β peptide are trapped by serum albumin to enhance amyloid-β activation of endothelial cells

Author(s): Reyes Barcelo Adriana | Gonzalez-Velasquez Francisco | Moss Melissa
Volume: 3
Issue: 1
Year: 2009
Engineering fusogenic molecules to achieve targeted transduction of enveloped lentiviral vectors

Author(s): Lei Yuning | Joo Kye-Il | Wang Pin
Volume: 3
Issue: 1
Year: 2009
Microbial inactivation and shelf life of apple juice treated with high pressure carbon dioxide

Author(s): Ferrentino Giovanna | Bruno Mariacarmela | Ferrari Giovanna | Poletto Massimo | Balaban Murat
Volume: 3
Issue: 1
Year: 2009
Large naturally-produced electric currents and voltage traverse damaged mammalian spinal cord

Author(s): Zuberi Mahvash | Liu-Snyder Peishan | ul Haque Aeraj | Porterfield David | Borgens Richard
Volume: 2
Issue: 1
Year: 2008
Backscattering particle immunoassays in wire-guide droplet manipulations

Author(s): Yoon Jeong-Yeol | You David
Volume: 2
Issue: 1
Year: 2008
Pyrene fate affected by humic acid amendment in soil slurry systems

Author(s): Liang Yanna | Sorensen Darwin | McLean Joan | Sims Ronald
Volume: 2
Issue: 1
Year: 2008
Biological approaches for addressing the grand challenge of providing access to clean drinking water

Author(s): Riley Mark | Gerba Charles | Elimelech Menachem
Volume: 5
Issue: 1
Year: 2011
Rational design of modular circuits for gene transcription: A test of the bottom-up approach

Author(s): Ceroni Francesca | Furini Simone | Giordano Emanuele | Cavalcanti Silvio
Volume: 4
Issue: 1
Year: 2010
Bioresponsive matrices in drug delivery

Author(s): You Jin-Oh | Almeda Dariela | Ye George | Auguste Debra
Volume: 4
Issue: 1
Year: 2010
Environment-sensitive behavior of fluorescent molecular rotors

Author(s): Haidekker Mark | Theodorakis Emmanuel
Volume: 4
Issue: 1
Year: 2010
Four suggestions for addressing public concern regarding synthetic biology

Author(s): Hatch Alex
Volume: 4
Issue: 1
Year: 2010
A positive feedback-based gene circuit to increase the production of a membrane protein

Author(s): Bansal Karan | Yang Ke | Nistala Goutam | Gennis Robert | Bhalerao Kaustubh
Volume: 4
Issue: 1
Year: 2010
Grand challenges for biological engineering

Author(s): Yoon Jeong-Yeol | Riley Mark
Volume: 3
Issue: 1
Year: 2009
A switchable light-input, light-output system modelled and constructed in yeast

Author(s): Sorokina Oxana | Kapus Anita | Terecskei Kata | Dixon Laura | Kozma-Bognar Laszlo | Nagy Ferenc | Millar Andrew
Volume: 3
Issue: 1
Year: 2009
Morphogen-defined patterning of Escherichia coli enabled by an externally tunable band-pass filter

Author(s): Sohka Takayuki | Heins Richard | Ostermeier Marc
Volume: 3
Issue: 1
Year: 2009
Reusable, polyethylene glycol-structured microfluidic channel for particle immunoassays

Author(s): Han Jin-Hee | Yoon Jeong-Yeol
Volume: 3
Issue: 1
Year: 2009
Synthesizing non-natural parts from natural genomic template

Author(s): Dhar Pawan | Thwin Chaw | Tun Kyaw | Tsumoto Yuko | Maurer-Stroh Sebastian | Eisenhaber Frank | Surana Uttam
Volume: 3
Issue: 1
Year: 2009
Synthetic control of a fitness tradeoff in yeast nitrogen metabolism

Author(s): Bayer Travis | Hoff Kevin | Beisel Chase | Lee Jack | Smolke Christina
Volume: 3
Issue: 1
Year: 2009
Fast quantitative determination of microbial rhamnolipids from cultivation broths by ATR-FTIR Spectroscopy

Author(s): Leitermann Frank | Syldatk Christoph | Hausmann Rudolf
Volume: 2
Issue: 1
Year: 2008
In vivo analysis of fracture toughness of thyroid gland tumors

Author(s): Ragavendra Nagesh | Ju JW | Sayre James | Hirschowitz Sharon | Chopra Inder | Yeh Michael
Volume: 2
Issue: 1
Year: 2008
Synthetic biology: enormous possibility, exaggerated perils

Author(s): Russ Zachary
Volume: 2
Issue: 1
Year: 2008
Authentic teaching and learning through synthetic biology

Author(s): Kuldell Natalie
Volume: 1
Issue: 1
Year: 2007
Rapid single step subcloning procedure by combined action of type II and type IIs endonucleases with ligase

Author(s): Fromme Tobias | Klingenspor Martin
Volume: 1
Issue: 1
Year: 2007
Role of reaction kinetics and mass transport in glucose sensing with nanopillar array electrodes

Author(s): Anandan Venkataramani | Yang Xiaoling | Kim Euihyeon | Rao Yeswanth | Zhang Guigen
Volume: 1
Issue: 1
Year: 2007
Behavioral recovery from traumatic brain injury after membrane reconstruction using polyethylene glycol

Author(s): Koob Andrew | Colby Julia | Borgens Richard
Volume: 2
Issue: 1
Year: 2008
Fan-out in gene regulatory networks

Author(s): Kim Kyung | Sauro Herbert
Volume: 4
Issue: 1
Year: 2010
The role of casein in supporting the operation of surface bound kinesin

Author(s): Verma Vivek | Hancock William | Catchmark Jeffrey
Volume: 2
Issue: 1
Year: 2008
Mapping the moral boundaries of biological engineering

Author(s): Russ Zachary
Volume: 3
Issue: 1
Year: 2009
Introducing Journal of Biological Engineering

Author(s): Riley Mark
Volume: 1
Issue: 1
Year: 2007
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