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International Journal of Proteomics

ISSN: 2090--2166
Publisher: Hindawi Publishing Corporation


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Quantitative Proteomics via High Resolution MS Quantification: Capabilities and Limitations

Author(s): Richard E. Higgs | Jon P. Butler | Bomie Han | Michael D. Knierman
Volume: 2013
Year: 2013
Proteomic Analysis of the Ontogenetic Variability in Plasma Composition of Juvenile and Adult Bothrops jararaca Snakes

Author(s): Karen de Morais-Zani | Kathleen Fernandes Grego | Aparecida Sadae Tanaka | Anita Mitico Tanaka-Azevedo
Volume: 2013
Year: 2013
Advances in Quantitative Mass Spectrometry

Author(s): Mu Wang | Bomie Han | Valerie Wasinger
Volume: 2013
Year: 2013
Additions to the Human Plasma Proteome via a Tandem MARS Depletion iTRAQ-Based Workflow

Author(s): Zhiyun Cao | Sachin Yende | John A. Kellum | Renã A. S. Robinson
Volume: 2013
Year: 2013
Current Status and Advances in Quantitative Proteomic Mass Spectrometry

Author(s): Valerie C. Wasinger | Ming Zeng | Yunki Yau
Volume: 2013
Year: 2013
iTRAQ-Based and Label-Free Proteomics Approaches for Studies of Human Adenovirus Infections

Author(s): Hung V. Trinh | Jonas Grossmann | Peter Gehrig | Bernd Roschitzki | Ralph Schlapbach | Urs F. Greber | Silvio Hemmi
Volume: 2013
Year: 2013
Top-Down Characterization of the Post-Translationally Modified Intact Periplasmic Proteome from the Bacterium Novosphingobium aromaticivorans

Author(s): Si Wu | Roslyn N. Brown | Samuel H. Payne | Da Meng | Rui Zhao | Nikola Tolić | Li Cao | Anil Shukla | Matthew E. Monroe | Ronald J. Moore | Mary S. Lipton | Ljiljana Paša-Tolić
Volume: 2013
Year: 2013
Advantageous Uses of Mass Spectrometry for the Quantification of Proteins

Author(s): John E. Hale
Volume: 2013
Year: 2013
Issues and Applications in Label-Free Quantitative Mass Spectrometry

Author(s): Xianyin Lai | Lianshui Wang | Frank A. Witzmann
Volume: 2013
Year: 2013
Protein Target Quantification Decision Tree

Author(s): Jong Won Kim | Jinsam You
Volume: 2013
Year: 2013
Serum Biomarkers Identification by Mass Spectrometry in High-Mortality Tumors

Author(s): Alessandra Tessitore | Agata Gaggiano | Germana Cicciarelli | Daniela Verzella | Daria Capece | Mariafausta Fischietti | Francesca Zazzeroni | Edoardo Alesse
Volume: 2013
Year: 2013
A Novel Peptide-Based SILAC Method to Identify the Posttranslational Modifications Provides Evidence for Unconventional Ubiquitination in the ER-Associated Degradation Pathway

Author(s): Veronica G. Anania | Daisy J. Bustos | Jennie R. Lill | Donald S. Kirkpatrick | Laurent Coscoy
Volume: 2013
Year: 2013
An Internal Standard-Assisted Synthesis and Degradation Proteomic Approach Reveals the Potential Linkage between VPS4B Depletion and Activation of Fatty Acid β-Oxidation in Breast Cancer Cells

Author(s): Zhongping Liao | Stefani N. Thomas | Yunhu Wan | H. Helen Lin | David K. Ann | Austin J. Yang
Volume: 2013
Year: 2013
Proteomics Sample Preparation, Preservation, and Fractionation

Author(s): Gary B. Smejkal
Volume: 2012
Year: 2012
Functional Proteomic Profiling of Phosphodiesterases Using SeraFILE Separations Platform

Author(s): Amita R. Oka | Matthew P. Kuruc | Ketan M. Gujarathi | Swapan Roy
Volume: 2012
Year: 2012
Reconstruction of Sugar Metabolic Pathways of Giardia lamblia

Author(s): Jian Han | Lesley J. Collins
Volume: 2012
Year: 2012
Miniaturized Mass-Spectrometry-Based Analysis System for Fully Automated Examination of Conditioned Cell Culture Media

Author(s): Emanuel Weber | Martijn W. H. Pinkse | Eda Bener-Aksam | Michael J. Vellekoop | Peter D. E. M. Verhaert
Volume: 2012
Year: 2012
An Economical High-Throughput Protocol for Multidimensional Fractionation of Proteins

Author(s): David John Tooth | Varun Gopala Krishna | Robert Layfield
Volume: 2012
Year: 2012
Characterization of the Phosphoproteome in Human Bronchoalveolar Lavage Fluid

Author(s): Francesco Giorgianni | Valentina Mileo | Dominic M. Desiderio | Silvia Catinella | Sarka Beranova-Giorgianni
Volume: 2012
Year: 2012
SELDI-TOF-MS Serum Profiling Reveals Predictors of Cardiac MRI Changes in Marathon Runners

Author(s): George D. Wilson | Timothy J. Geddes | Barbara L. Pruetz | Bryan J. Thibodeau | Amy Murawka | James M. Colar | Peter A. McCullough | Justin E. Trivax
Volume: 2012
Year: 2012
A Comprehensive Subcellular Proteomic Survey of Salmonella Grown under Phagosome-Mimicking versus Standard Laboratory Conditions

Author(s): Roslyn N. Brown | James A. Sanford | Jea H. Park | Brooke L. Deatherage | Boyd L. Champion | Richard D. Smith | Fred Heffron | Joshua N. Adkins
Volume: 2012
Year: 2012
Identification of a Novel Biomarker for Biliary Tract Cancer Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry

Author(s): Shintaro Kikkawa | Kazuyuki Sogawa | Mamoru Satoh | Hiroshi Umemura | Yoshio Kodera | Kazuyuki Matsushita | Takeshi Tomonaga | Masaru Miyazaki | Osamu Yokosuka | Fumio Nomura
Volume: 2012
Year: 2012
Chromatin-Associated Proteins Revealed by SILAC-Proteomic Analysis Exhibit a High Likelihood of Requirement for Growth Fitness under DNA Damage Stress

Author(s): Han Wang | Pornpimol Tipthara | Lei Zhu | Suk Yean Poon | Kai Tang | Jianhua Liu
Volume: 2012
Year: 2012
Rapid Screening of the Epidermal Growth Factor Receptor Phosphosignaling Pathway via Microplate-Based Dot Blot Assays

Author(s): Amedeo Cappione | Janet Smith | Masaharu Mabuchi | Timothy Nadler
Volume: 2012
Year: 2012
Clinical Proteomics

Author(s): Ákos Végvári | Tadashi Kondo | John G. Marshall
Volume: 2012
Year: 2012
The Application of a Three-Step Serum Proteome Analysis for the Discovery and Identification of Novel Biomarkers of Hepatocellular Carcinoma

Author(s): Asako Kimura | Kazuyuki Sogawa | Mamoru Satoh | Yoshio Kodera | Osamu Yokosuka | Takeshi Tomonaga | Fumio Nomura
Volume: 2012
Year: 2012
Human Myocardial Protein Pattern Reveals Cardiac Diseases

Author(s): Jonas Bergquist | Gökhan Baykut | Maria Bergquist | Matthias Witt | Franz-Josef Mayer | Doan Baykut
Volume: 2012
Year: 2012
Cathepsin D Expression in Colorectal Cancer: From Proteomic Discovery through Validation Using Western Blotting, Immunohistochemistry, and Tissue Microarrays

Author(s): Chandra Kirana | Hongjun Shi | Emma Laing | Kylie Hood | Rose Miller | Peter Bethwaite | John Keating | T. William Jordan | Mark Hayes | Richard Stubbs
Volume: 2012
Year: 2012
Ethanol Exposure Alters Protein Expression in a Mouse Model of Fetal Alcohol Spectrum Disorders

Author(s): Stephen Mason | Bruce Anthony | Xianyin Lai | Heather N. Ringham | Mu Wang | Frank A. Witzmann | Jin-Sam You | Feng C. Zhou
Volume: 2012
Year: 2012
Biomarker Discovery of Pancreatic and Gastrointestinal Cancer by 2DICAL: 2-Dimensional Image-Converted Analysis of Liquid Chromatography and Mass Spectrometry

Author(s): Masaya Ono | Masahiro Kamita | Yusuke Murakoshi | Junichi Matsubara | Kazufumi Honda | Banno Miho | Tomohiro Sakuma | Tesshi Yamada
Volume: 2012
Year: 2012
Method for Recovery and Immunoaffinity Enrichment of Membrane Proteins Illustrated with Metastatic Ovarian Cancer Tissues

Author(s): Luke V. Schneider | Varsha Likhte | William H. Wright | Frances Chu | Emma Cambron | Anne Baldwin-Burnett | Jessica Krakow | Gary B. Smejkal
Volume: 2012
Year: 2012
Proteolytic Potential of the MSC Exosome Proteome: Implications for an Exosome-Mediated Delivery of Therapeutic Proteasome

Author(s): Ruenn Chai Lai | Soon Sim Tan | Bao Ju Teh | Siu Kwan Sze | Fatih Arslan | Dominique P. de Kleijn | Andre Choo | Sai Kiang Lim
Volume: 2012
Year: 2012
Application of iTRAQ Reagents to Relatively Quantify the Reversible Redox State of Cysteine Residues

Author(s): Brian McDonagh | Pablo Martínez-Acedo | Jesús Vázquez | C. Alicia Padilla | David Sheehan | José Antonio Bárcena
Volume: 2012
Year: 2012
High Mass Accuracy Phosphopeptide Identification Using Tandem Mass Spectra

Author(s): Rovshan G. Sadygov
Volume: 2012
Year: 2012
Cancer Phenotype Diagnosis and Drug Efficacy within Japanese Health Care

Author(s): Toshihide Nishimura | Harubumi Kato | Norihiko Ikeda | Makoto Kihara | Masaharu Nomura | Yasufumi Kato | György Marko-Varga
Volume: 2012
Year: 2012
Identification of Human Serum Peptides in Fourier Transform Ion Cyclotron Resonance Precision Profiles

Author(s): Simone Nicolardi | Hans Dalebout | Marco R. Bladergroen | Wilma E. Mesker | Rob A. E. M. Tollenaar | André M. Deelder | Yuri E. M. van der Burgt
Volume: 2012
Year: 2012
Seven-Signal Proteomic Signature for Detection of Operable Pancreatic Ductal Adenocarcinoma and Their Discrimination from Autoimmune Pancreatitis

Author(s): Kiyoshi Yanagisawa | Shuta Tomida | Keitaro Matsuo | Chinatsu Arima | Miyoko Kusumegi | Yukihiro Yokoyama | Shigeru B. H. Ko | Nobumasa Mizuno | Takeo Kawahara | Yoko Kuroyanagi | Toshiyuki Takeuchi | Hidemi Goto | Kenji Yamao | Masato Nagino | Kazuo Tajima | Takashi Takahashi
Volume: 2012
Year: 2012
A Miniaturized Ligand Binding Assay for EGFR

Author(s): Jochen M. Schwenk | Oliver Poetz | Robert Zeillinger | Thomas O. Joos
Volume: 2012
Year: 2012
Proteomic and Bioinformatics Analyses of Mouse Liver Microsomes

Author(s): Fang Peng | Xianquan Zhan | Mao-Yu Li | Fan Fang | Guoqing Li | Cui Li | Peng-Fei Zhang | Zhuchu Chen
Volume: 2012
Year: 2012
A Bayesian Model Averaging Approach to the Quantification of Overlapping Peptides in an MALDI-TOF Mass Spectrum

Author(s): Qi Zhu | Adetayo Kasim | Dirk Valkenborg | Tomasz Burzykowski
Volume: 2011
Year: 2011
Proteomic Characterization of Cerebrospinal Fluid from Ataxia-Telangiectasia (A-T) Patients Using a LC/MS-Based Label-Free Protein Quantification Technology

Author(s): Monika Dzieciatkowska | Guihong Qi | Jinsam You | Kerry G. Bemis | Heather Sahm | Howard M. Lederman | Thomas O. Crawford | Lawrence M. Gelbert | Cynthia Rothblum-Oviatt | Mu Wang
Volume: 2011
Year: 2011
Phosphorylation: The Molecular Switch of Double-Strand Break Repair

Author(s): K. C. Summers | F. Shen | E. A. Sierra Potchanant | E. A. Phipps | R. J. Hickey | L. H. Malkas
Volume: 2011
Year: 2011
Combined Use of a Solid-Phase Hexapeptide Ligand Library with Liquid Chromatography and Two-Dimensional Difference Gel Electrophoresis for Intact Plasma Proteomics

Author(s): Tatsuo Hagiwara | Yumi Saito | Yukiko Nakamura | Takeshi Tomonaga | Yasufumi Murakami | Tadashi Kondo
Volume: 2011
Year: 2011
Lung Cancer Proteomics: Recent Advances in Biomarker Discovery

Author(s): Paola Indovina | Eleonora Marcelli | Pasquale Maranta | Giulio Tarro
Volume: 2011
Year: 2011
Proteomic Approach to Evaluate Mechanisms That Contribute to Food Allergenicity: Comparative 2D-DIGE Analysis of Radioallergosorbent Test Positive and Negative Patients

Author(s): Bindukumar Nair | John C. Wheeler | Donald E. Sykes | Paula Brown | Jessica L. Reynolds | Ravikumar Aalinkeel | Supriya D. Mahajan | Stanley A. Schwartz
Volume: 2011
Year: 2011
The Application of a Three-Step Proteome Analysis for Identification of New Biomarkers of Pancreatic Cancer

Author(s): Mayinuer Abulaizi | Takeshi Tomonaga | Mamoru Satoh | Kazuyuki Sogawa | Kazuyuki Matsushita | Yoshio Kodera | Jurat Obul | Shigetsugu Takano | Hideyuki Yoshitomi | Masaru Miyazaki | Fumio Nomura
Volume: 2011
Year: 2011
Adsorption of Urinary Proteins on the Conventionally Used Urine Collection Tubes: Possible Effects on Urinary Proteome Analysis and Prevention of the Adsorption by Polymer Coating

Author(s): Iwao Kiyokawa | Kazuyuki Sogawa | Keiko Ise | Fumie Iida | Mamoru Satoh | Toshihide Miura | Ryo Kojima | Katsuhiro Katayama | Fumio Nomura
Volume: 2011
Year: 2011
Clinical Utility of Serum Autoantibodies Detected by Protein Microarray in Melanoma

Author(s): Michael S. Sabel | Yashu Liu | Kent A. Griffith | Jintang He | Xaiolei Xie | David M. Lubman
Volume: 2011
Year: 2011
The Use of Protein-Based Biomarkers for the Diagnosis of Cystic Tumors of the Pancreas

Author(s): Richard S. Kwon | Diane M. Simeone
Volume: 2011
Year: 2011
Urine Glycoprotein Profile Reveals Novel Markers for Chronic Kidney Disease

Author(s): Anuradha Vivekanandan-Giri | Jessica L. Slocum | Carolyn L. Buller | Venkatesha Basrur | Wenjun Ju | Rodica Pop-Busui | David M. Lubman | Matthias Kretzler | Subramaniam Pennathur
Volume: 2011
Year: 2011
Proteomics in Melanoma Biomarker Discovery: Great Potential, Many Obstacles

Author(s): Michael S. Sabel | Yashu Liu | David M. Lubman
Volume: 2011
Year: 2011
Comprehensive Proteomic Profiling of Aldehyde Dehydrogenases in Lung Adenocarcinoma Cell Lines

Author(s): Qing Zhang | Ayumu Taguchi | Mark Schliekelman | Chee-Hong Wong | Alice Chin | Rork Kuick | David E. Misek | Samir Hanash
Volume: 2011
Year: 2011
Proteomic-Based Biosignatures in Breast Cancer Classification and Prediction of Therapeutic Response

Author(s): Jianbo He | Stephen A. Whelan | Ming Lu | Dejun Shen | Debra U. Chung | Romaine E. Saxton | Kym F. Faull | Julian P. Whitelegge | Helena R. Chang
Volume: 2011
Year: 2011
Proteomics-Based Disease Biomarkers

Author(s): David E. Misek | Tadashi Kondo | Mark W. Duncan
Volume: 2011
Year: 2011
Glycoproteomics-Based Identification of Cancer Biomarkers

Author(s): Evelyn H. Kim | David E. Misek
Volume: 2011
Year: 2011
Secretome Analysis of Skeletal Myogenesis Using SILAC and Shotgun Proteomics

Author(s): C. Y. X'avia Chan | John C. McDermott | K. W. Michael Siu
Volume: 2011
Year: 2011
Heat Shock Proteins in the Human Eye

Author(s): Lærke Urbak | Henrik Vorum
Volume: 2010
Year: 2010
Heat Shock Proteins in Association with Heat Tolerance in Grasses

Author(s): Yan Xu | Chenyang Zhan | Bingru Huang
Volume: 2011
Year: 2011
Cladribine and Fludarabine Nucleoside Change the Levels of CD Antigens on B-Lymphoproliferative Disorders

Author(s): Carlos Cassano | Swetlana Mactier | Stephen P. Mulligan | Larissa Belov | Pauline Huang | Richard I. Christopherson
Volume: 2010
Year: 2010
Comparative Proteomic Analysis of Proteins Involved in the Tumorigenic Process of Seminal Vesicle Carcinoma in Transgenic Mice

Author(s): Wei-Chao Chang | Chuan-Kai Chou | Chih-Chiang Tsou | Sheng-Hsiang Li | Chein-Hung Chen | Yu-Xing Zhuo | Wen-Lian Hsu | Chung-Hsuan Chen
Volume: 2010
Year: 2010
Expression of Heat Shock and Other Stress Response Proteins in Ticks and Cultured Tick Cells in Response to Anaplasma spp. Infection and Heat Shock

Author(s): Margarita Villar | Nieves Ayllón | Ann T. Busby | Ruth C. Galindo | Edmour F. Blouin | Katherine M. Kocan | Elena Bonzón-Kulichenko | Zorica Zivkovic | Consuelo Almazán | Alessandra Torina | Jesús Vázquez | José de la Fuente
Volume: 2010
Year: 2010
Proteomic Signatures of the Zebrafish (Danio rerio) Embryo: Sensitivity and Specificity in Toxicity Assessment of Chemicals

Author(s): Karen Hanisch | Eberhard Küster | Rolf Altenburger | Ulrike Gündel
Volume: 2010
Year: 2010
p73-Binding Partners and Their Functional Significance

Author(s): Toshinori Ozaki | Natsumi Kubo | Akira Nakagawara
Volume: 2010
Year: 2010
Heat Shock Protein: Hard Worker or Bad Offender for Gastric Diseases

Author(s): Ho-Jae Lee | Chan Young Ock | Seong-Jin Kim | Ki-Baik Hahm
Volume: 2010
Year: 2010
PolyAlign: A Versatile LC-MS Data Alignment Tool for Landmark-Selected and -Automated Use

Author(s): Heidi Vähämaa | Ville R. Koskinen | Waltteri Hosia | Robert Moulder | Olli S. Nevalainen | Riitta Lahesmaa | Tero Aittokallio | Jussi Salmi
Volume: 2011
Year: 2011
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