Unusual Intron Conservation near Tissue-Regulated Exons Found by Splicing Microarrays.
Author(s): Sugnet | Srinivasan | Clark | O'brien | Cline | Wang | Williams | Kulp | Blume | Haussler | Ares
Volume: 2
Issue: 1
Year: 2006




Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model.
Author(s): Lunter | Ponting | Hein
Volume: 2
Issue: 1
Year: 2006




Long-Range Periodic Patterns in Microbial Genomes Indicate Significant Multi-Scale Chromosomal Organization.
Author(s): Allen | Price | Joyce | Palsson
Volume: 2
Issue: 1
Year: 2006




Revealing Posttranscriptional Regulatory Elements Through Network-Level Conservation.
Author(s): Chan | Elemento | Tavazoie
Volume: 1
Issue: 7
Year: 2005




The Activity Reaction Core and Plasticity of Metabolic Networks.
Author(s): Almaas | Oltvai | Barabási
Volume: 1
Issue: 7
Year: 2005




Selective Constraint on Noncoding Regions of Hominid Genomes.
Author(s): Bush | Lahn
Volume: 1
Issue: 7
Year: 2005




Comparing the Dictyostelium and Entamoeba Genomes Reveals an Ancient Split in the Conosa Lineage.
Author(s): Song | Xu | Olsen | Loomis | Shaulsky | Kuspa | Sucgang
Volume: 1
Issue: 7
Year: 2005




New maximum likelihood estimators for eukaryotic intron evolution.
Author(s): Nguyen Hung D | Yoshihama Maki | Kenmochi Naoya
Volume: 1
Issue: 7
Year: 2005




Segregation of the brain into gray and white matter: a design minimizing conduction delays.
Author(s): Wen Quan | Chklovskii Dmitri B
Volume: 1
Issue: 7
Year: 2005




Folding Free Energies of 5'-UTRs Impact Post-Transcriptional Regulation on a Genomic Scale in Yeast.
Author(s): Ringnér | Krogh
Volume: 1
Issue: 7
Year: 2005




Refining protein subcellular localization.
Author(s): Scott Michelle S | Calafell Sara J | Thomas David Y | Hallett Michael T
Volume: 1
Issue: 6
Year: 2005




Allele-specific amplification in cancer revealed by SNP array analysis.
Author(s): Laframboise Thomas | Weir Barbara A | Zhao Xiaojun | Beroukhim Rameen | Li Cheng | Harrington David | Sellers William R | Meyerson Matthew
Volume: 1
Issue: 6
Year: 2005




Use of Artificial Genomes in Assessing Methods for Atypical Gene Detection.
Author(s): Azad | Lawrence
Volume: 1
Issue: 6
Year: 2005




Bioinformatics education--perspectives and challenges.
Author(s): Ranganathan Shoba
Volume: 1
Issue: 6
Year: 2005




Quasispecies made simple.
Author(s): Bull J J | Meyers Lauren Ancel | Lachmann Michael
Volume: 1
Issue: 6
Year: 2005




Quantitative analysis of genetic and neuronal multi-perturbation experiments.
Author(s): Kaufman Alon | Keinan Alon | Meilijson Isaac | Kupiec Martin | Ruppin Eytan
Volume: 1
Issue: 6
Year: 2005




NIH Roadmap Interdisciplinary Research Initiatives.
Author(s): Huerta Michael F | Farber Gregory K | Wilder Elizabeth L | Kleinman Dushanka V | Grady Patricia A | Schwartz David A | Tabak Lawrence A
Volume: 1
Issue: 6
Year: 2005




Stealth Proteins: In Silico Identification of a Novel Protein Family Rendering Bacterial Pathogens Invisible to Host Immune Defense.
Author(s): Sperisen | Schmid | Bucher | Zilian
Volume: 1
Issue: 6
Year: 2005




A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes.
Author(s): Haft | Selengut | Mongodin | Nelson
Volume: 1
Issue: 6
Year: 2005




The Association of Tetrameric Acetylcholinesterase with ColQ Tail: A Block Normal Mode Analysis.
Author(s): Zhang | McCammon
Volume: 1
Issue: 6
Year: 2005




Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.
Author(s): Rodionov Dmitry A | Dubchak Inna L | Arkin Adam P | Alm Eric J | Gelfand Mikhail S
Volume: 1
Issue: 5
Year: 2005




Genomic Variability within an Organism Exposes Its Cell Lineage Tree.
Author(s): Frumkin Dan | Wasserstrom Adam | Kaplan Shai | Feige Uriel | Shapiro Ehud
Volume: 1
Issue: 5
Year: 2005




Ultrasensitization: switch-like regulation of cellular signaling by transcriptional induction.
Author(s): Legewie Stefan | Blüthgen Nils | Schäfer Reinhold | Herzel Hanspeter
Volume: 1
Issue: 5
Year: 2005




Flux balance analysis of mycolic Acid pathway: targets for anti-tubercular drugs.
Author(s): Raman Karthik | Rajagopalan Preethi | Chandra Nagasuma
Volume: 1
Issue: 5
Year: 2005




Structural Evolution of the Protein Kinase-Like Superfamily.
Author(s): Scheeff | Bourne
Volume: 1
Issue: 5
Year: 2005




SNPdetector: A Software Tool for Sensitive and Accurate SNP Detection.
Author(s): Zhang Jinghui | Wheeler David A | Yakub Imtiaz | Wei Sharon | Sood Raman | Rowe William | Liu Paul P | Gibbs Richard A | Buetow Kenneth H
Volume: 1
Issue: 5
Year: 2005




Inferring Hypotheses on Functional Relationships of Genes: Analysis of the Arabidopsis thaliana Subtilase Gene Family.
Author(s): Rautengarten | Steinhauser | Büssis | Stintzi | Schaller | Kopka | Altmann
Volume: 1
Issue: 4
Year: 2005




The human connectome: a structural description of the human brain.
Author(s): Sporns Olaf | Tononi Giulio | Kötter Rolf
Volume: 1
Issue: 4
Year: 2005




A Biophysical Model of the Mitochondrial Respiratory System and Oxidative Phosphorylation.
Author(s): Beard
Volume: 1
Issue: 4
Year: 2005




Modeling the amplification dynamics of human alu retrotransposons.
Author(s): Hedges Dale J | Cordaux Richard | Xing Jinchuan | Witherspoon David J | Rogers Alan R | Jorde Lynn B | Batzer Mark A
Volume: 1
Issue: 4
Year: 2005




A Digital Atlas to Characterize the Mouse Brain Transcriptome.
Author(s): Carson | Ju | Lu | Thaller | Xu | Pallas | Crair | Warren | Chiu | Eichele
Volume: 1
Issue: 4
Year: 2005




Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing.
Author(s): Xiao | Yang | Burckin | Shiue | Hartzog | Segal
Volume: 1
Issue: 4
Year: 2005




Entropic stabilization of proteins and its proteomic consequences.
Author(s): Berezovsky Igor N | Chen William W | Choi Paul J | Shakhnovich Eugene I
Volume: 1
Issue: 4
Year: 2005




ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun.
Author(s): Li | Ye | Li | Wang | Han | Ye | Wang | Yang | Yu | Wong | Wang
Volume: 1
Issue: 4
Year: 2005




Transition to Quorum Sensing in an Agrobacterium Population: A Stochastic Model.
Author(s): Goryachev | Toh | Wee | Lee | Zhang | Zhang
Volume: 1
Issue: 4
Year: 2005




Evidence of a Double-Lid Movement in Pseudomonas aeruginosa Lipase: Insights from Molecular Dynamics Simulations.
Author(s): Cherukuvada | Seshasayee | Raghunathan | Anishetty | Pennathur
Volume: 1
Issue: 3
Year: 2005




Evolution of genetic potential.
Author(s): Ancel Meyers Lauren | Ancel Fredric D | Lachmann Michael
Volume: 1
Issue: 3
Year: 2005




Comparative Genomics and Disorder Prediction Identify Biologically Relevant SH3 Protein Interactions.
Author(s): Beltrao | Serrano
Volume: 1
Issue: 3
Year: 2005




Functional Coverage of the Human Genome by Existing Structures, Structural Genomics Targets, and Homology Models.
Author(s): Xie | Bourne
Volume: 1
Issue: 3
Year: 2005




Comparative Analyses of Fundamental Differences in Membrane Transport Capabilities in Prokaryotes and Eukaryotes.
Author(s): Ren | Paulsen
Volume: 1
Issue: 3
Year: 2005




Will a biological database be different from a biological journal?
Author(s): Bourne Philip
Volume: 1
Issue: 3
Year: 2005




Molecular origin of polyglutamine aggregation in neurodegenerative diseases.
Author(s): Khare Sagar D | Ding Feng | Gwanmesia Kenneth N | Dokholyan Nikolay V
Volume: 1
Issue: 3
Year: 2005




Prediction of Transcriptional Terminators in Bacillus subtilis and Related Species.
Author(s): de Hoon | Makita | Nakai | Miyano
Volume: 1
Issue: 3
Year: 2005




Molecular switches at the synapse emerge from receptor and kinase traffic.
Author(s): Hayer Arnold | Bhalla Upinder S
Volume: 1
Issue: 2
Year: 2005




Computational ecology: from the complex to the simple and back.
Author(s): Pascual Mercedes
Volume: 1
Issue: 2
Year: 2005




The RNA silencing pathway: the bits and pieces that matter.
Author(s): Groenenboom Marian A C | Marée Athanasius F M | Hogeweg Paulien
Volume: 1
Issue: 2
Year: 2005




Theoretical analysis of pre-receptor image conditioning in weakly electric fish.
Author(s): Migliaro Adriana | Caputi Angel A | Budelli Ruben
Volume: 1
Issue: 2
Year: 2005




Inflammatory aetiology of human myometrial activation tested using directed graphs.
Author(s): Bisits Andrew M | Smith Roger | Mesiano Sam | Yeo George | Kwek Kenneth | Macintyre David | Chan Eng C
Volume: 1
Issue: 2
Year: 2005



