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BMC Medical Genomics

ISSN: 1755--8794
Publisher: BioMed Central


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Potential roles of microRNAs in regulating long intergenic noncoding RNAs

Author(s): Juan Liran | Wang Guohua | Radovich Milan | Schneider Bryan P | Clare Susan E | Wang Yadong | Liu Yunlong
Volume: 6
Issue: Suppl 1
Year: 2013
Recursive SVM biomarker selection for early detection of breast cancer in peripheral blood

Author(s): Zhang Fan | Kaufman Howard L | Deng Youping | Drabier Renee
Volume: 6
Issue: Suppl 1
Year: 2013
Genome-wide prediction and analysis of human tissue-selective genes using microarray expression data

Author(s): Teng Shaolei | Yang Jack Y | Wang Liangjiang
Volume: 6
Issue: Suppl 1
Year: 2013
Exploring the pathogenetic association between schizophrenia and type 2 diabetes mellitus diseases based on pathway analysis

Author(s): Liu Yanli | Li Zezhi | Zhang Meixia | Deng Youping | Yi Zhenghui | Shi Tieliu
Volume: 6
Issue: Suppl 1
Year: 2013
Short and long term gene expression variation and networking in human proximal tubule cells when exposed to cadmium

Author(s): Garrett Scott H | Clarke Kaitlin | Sens Donald A | Deng Youping | Somji Seema | Zhang Ke K
Volume: 6
Issue: Suppl 1
Year: 2013
A novel method for the normalization of microRNA RT-PCR data

Author(s): Qureshi Rehman | Sacan Ahmet
Volume: 6
Issue: Suppl 1
Year: 2013
A novel method for finding non-small cell lung cancer diagnosis biomarkers

Author(s): Tran Quoc-Nam
Volume: 6
Issue: Suppl 1
Year: 2013
Breast cancer subtyping from plasma proteins

Author(s): Zhang Fan | Chen Jake Y
Volume: 6
Issue: Suppl 1
Year: 2013
TSG: a new algorithm for binary and multi-class cancer classification and informative genes selection

Author(s): Wang Haiyan | Zhang Hongyan | Dai Zhijun | Chen Ming-shun | Yuan Zheming
Volume: 6
Issue: Suppl 1
Year: 2013
Assessment of gene order computing methods for Alzheimer's disease

Author(s): Hu Benqiong | Jiang Gang | Pang Chaoyang | Wang Shipeng | Liu Qingzhong | Chen Zhongxue | Vanderburg Charles R | Rogers Jack T | Deng Youping | Huang Xudong
Volume: 6
Issue: Suppl 1
Year: 2013
CpGIMethPred: computational model for predicting methylation status of CpG islands in human genome

Author(s): Zheng Hao | Wu Hongwei | Li Jinping | Jiang Shi-Wen
Volume: 6
Issue: Suppl 1
Year: 2013
The current trend of genomics research for human diseases

Author(s): Zhang Ke K | Arabnia Hamid R | Wang Yunliang | Deng Youping
Volume: 6
Issue: Suppl 1
Year: 2013
Development of a novel DNA sequencing method not only for hepatitis B virus genotyping but also for drug resistant mutation detection

Author(s): Wang Fanjun | Lu Lili | Yu Changshun | Lv Zhanwu | Luo Xuelian | Wan Chao | Hu Zhaohui | Zhu Qinyi | Deng Youping | Zhang Chuyu
Volume: 6
Issue: Suppl 1
Year: 2013
HDAM: a resource of human disease associated mutations from next generation sequencing studies

Author(s): Jia Meiwei | Liu Yanli | Shen Zhongchao | Zhao Chen | Zhang Meixia | Yi Zhenghui | Wen Chengping | Deng Youping | Shi Tieliu
Volume: 6
Issue: Suppl 1
Year: 2013
Identification of regulatory regions of bidirectional genes in cervical cancer

Author(s): Wang Guohua | Qi Ke | Zhao Yuming | Li Yu | Juan Liran | Teng Mingxiang | Li Lang | Liu Yunlong | Wang Yadong
Volume: 6
Issue: Suppl 1
Year: 2013
Integrated lipidomics and transcriptomic analysis of peripheral blood reveals significantly enriched pathways in type 2 diabetes mellitus

Author(s): Zhao Chen | Mao Jinghe | Ai Junmei | Shenwu Ming | Shi Tieliu | Zhang Daqing | Wang Xiaonan | Wang Yunliang | Deng Youping
Volume: 6
Issue: Suppl 1
Year: 2013
Detecting differentially methylated loci for Illumina Array methylation data based on human ovarian cancer data

Author(s): Chen Zhongxue | Huang Hanwen | Liu Jianzhong | Tony Ng Hon | Nadarajah Saralees | Huang Xudong | Deng Youping
Volume: 6
Issue: Suppl 1
Year: 2013
Multilocus loss of DNA methylation in individuals with mutations in the histone H3 Lysine 4 Demethylase KDM5C

Author(s): Grafodatskaya Daria | Chung Barian HY | Butcher Darci T | Turinsky Andrei L | Goodman Sarah J | Choufani Sana | Chen Yi-An | Lou Youliang | Zhao Chunhua | Rajendram Rageen | Abidi Fatima E | Skinner Cindy | Stavropoulos James | Bondy Carolyn A | Hamilton Jill | Wodak Shoshana | Scherer Stephen W | Schwartz Charles E | Weksberg Rosanna
Volume: 6
Issue: 1
Year: 2013
Next-generation text-mining mediated generation of chemical response-specific gene sets for interpretation of gene expression data

Author(s): Hettne Kristina M | Boorsma André | van Dartel Dorien A M | Goeman Jelle J | de Jong Esther | Piersma Aldert H | Stierum Rob H | Kleinjans Jos C | Kors Jan A
Volume: 6
Issue: 1
Year: 2013
Evaluation of the imputation performance of the program IMPUTE in an admixed sample from Mexico City using several model designs

Author(s): Krithika S | Valladares-Salgado Adán | Peralta Jesus | La Peña Jorge | Kumate-Rodríguez Jesus | Cruz Miguel | Parra Esteban J
Volume: 5
Issue: 1
Year: 2012
Routine use of microarray-based gene expression profiling to identify patients with low cytogenetic risk acute myeloid leukemia: accurate results can be obtained even with suboptimal samples

Author(s): de la Blétière Diane Raingeard | Blanchet Odile | Cornillet-Lefèbvre Pascale | Coutolleau Anne | Baranger Laurence | Geneviève Franck | Luquet Isabelle | Hunault-Berger Mathilde | Beucher Annaelle | Schmidt-Tanguy Aline | Zandecki Marc | Delneste Yves | Ifrah Norbert | Guardiola Philippe
Volume: 5
Issue: 1
Year: 2012
Fibroblasts from phenotypically normal palmar fascia exhibit molecular profiles highly similar to fibroblasts from active disease in Dupuytren's Contracture

Author(s): Satish Latha | LaFramboise William A | Johnson Sandra | Vi Linda | Njarlangattil Anna | Raykha Christina | Krill-Burger John Michael | Gallo Phillip H | O'Gorman David B | Gan Bing | Baratz Mark E | Ehrlich Garth D | Kathju Sandeep
Volume: 5
Issue: 1
Year: 2012
Gankyrin gene deletion followed by proteomic analysis: insight into the roles of Gankyrin in Tumorigenesis and Metastasis

Author(s): Luo Xue | Chen Liang | Dai Jiang | Gao Yanfei | Wang Hongli | Wang Na | Zhao Yongqiang | Liu Feng | Sang Zhihong | Wang Jie | Li Weihua | He Kun | Jin Baofeng | Man Jianghong | Zhang Wei | Xia Qing
Volume: 5
Issue: 1
Year: 2012
Structural, functional and molecular analysis of the effects of aging in the small intestine and colon of C57BL/6J mice

Author(s): Steegenga Wilma T | de Wit Nicole JW | Boekschoten Mark V | IJssennagger Noortje | Lute Carolien | Keshtkar Shohreh | Bromhaar Mechteld M | Kampman Ellen | de Groot Lisette C | Muller Michael
Volume: 5
Issue: 1
Year: 2012
Immune genes are associated with human glioblastoma pathology and patient survival

Author(s): Vauléon Elodie | Tony Avril | Hamlat Abderrahmane | Etcheverry Amandine | Chiforeanu Dan | Menei Philippe | Mosser Jean | Quillien Véronique | Aubry Marc
Volume: 5
Issue: 1
Year: 2012
Association of differential gene expression with imatinib mesylate and omacetaxine mepesuccinate toxicity in lymphoblastoid cell lines

Author(s): Kulkarni Hemant | Göring Harald H H | Diego Vincent | Cole Shelley | Walder Ken R | Collier Greg R | Blangero John | Carless Melanie A
Volume: 5
Issue: 1
Year: 2012
Cell Line Derived Multi-Gene Predictor of Pathologic Response to Neoadjuvant Chemotherapy in Breast Cancer: A Validation Study on US Oncology 02-103 Clinical Trial

Author(s): Shen Kui | Qi Yuan | Song Nan | Tian Chunqiao | Rice Shara D | Gabrin Michael J | Brower Stacey L | Symmans William Fraser | O’Shaughnessy Joyce A | Holmes Frankie A | Asmar Lina | Pusztai Lajos
Volume: 5
Issue: 1
Year: 2012
Defining the genomic signature of the parous breast

Author(s): Peri Suraj | de Cicco Ricardo | Santucci-Pereira Julia | Slifker Michael | Ross Eric A | Russo Irma H | Russo Patricia A | Arslan Alan A | Belitskaya-Lévy Ilana | Zeleniuch-Jacquotte Anne | Bordas Pal | Lenner Per | Åhman Janet | Afanasyeva Yelena | Johansson Robert | Sheriff Fathima | Hallmans Göran | Toniolo Paolo | Russo Jose
Volume: 5
Issue: 1
Year: 2012
Histotype-specific copy-number alterations in ovarian cancer

Author(s): Huang Ruby YunJu | Chen Geng Bo | Matsumura Noriomi | Lai Hung-Cheng | Mori Seiichi | Li Jingjing | Wong Meng Kang | Konishi Ikuo | Thiery Jean-Paul | Goh Liang
Volume: 5
Issue: 1
Year: 2012
Molecular prediction for atherogenic risks across different cell types of leukocytes

Author(s): Cheng Feng | Keeley Ellen C | Lee Jae K
Volume: 5
Issue: 1
Year: 2012
Adipose tissue gene expression analysis reveals changes in inflammatory, mitochondrial respiratory and lipid metabolic pathways in obese insulin-resistant subjects

Author(s): Soronen Jarkko | Laurila Pirkka-Pekka | Naukkarinen Jussi | Surakka Ida | Ripatti Samuli | Jauhiainen Matti | Olkkonen Vesa M | Yki-Järvinen Hannele
Volume: 5
Issue: 1
Year: 2012
A direct comparison of next generation sequencing enrichment methods using an aortopathy gene panel- clinical diagnostics perspective

Author(s): Wooderchak-Donahue Whitney L | O’Fallon Brendan | Furtado Larissa V | Durtschi Jacob D | Plant Parker | Ridge Perry G | Rope Alan F | Yetman Angela T | Bayrak-Toydemir Pinar
Volume: 5
Issue: 1
Year: 2012
Molecular diagnostics for congenital hearing loss including 15 deafness genes using a next generation sequencing platform

Author(s): De Keulenaer Sarah | Hellemans Jan | Lefever Steve | Renard Jean-Pierre | De Schrijver Joachim | Van de Voorde Hendrik | Tabatabaiefar Mohammad | Van Nieuwerburgh Filip | Flamez Daisy | Pattyn Filip | Scharlaken Bieke | Deforce Dieter | Bekaert Sofie | Van Criekinge Wim | Vandesompele Jo | Van Camp Guy | Coucke Paul
Volume: 5
Issue: 1
Year: 2012
Visualization and identification of health space, based on personalized molecular phenotype and treatment response to relevant underlying biological processes

Author(s): Bouwman Jildau | Vogels Jack TWE | Wopereis Suzan | Rubingh Carina M | Bijlsma Sabina | van Ommen Ben
Volume: 5
Issue: 1
Year: 2012
High-throughput detection of aberrant imprint methylation in the ovarian cancer by the bisulphite PCR-Luminex method

Author(s): Hiura Hitoshi | Okae Hiroaki | Kobayash Hisato | Miyauchi Naoko | Sato Fumi | Sato Akiko | Suzuki Fumihiko | Nagase Satoru | Sugawara Junichi | Nakai Kunihiko | Yaegashi Nobuo | Arima Takahiro
Volume: 5
Issue: 1
Year: 2012
Genes associated with MUC5AC expression in small airway epithelium of human smokers and non-smokers

Author(s): Wang Guoqing | Xu Zhibo | Wang Rui | Al-Hijji Mohammed | Salit Jacqueline | Strulovici-Barel Yael | Tilley Ann E | Mezey Jason G | Crystal Ronald G
Volume: 5
Issue: 1
Year: 2012
Direct integration of intensity-level data from Affymetrix and Illumina microarrays improves statistical power for robust reanalysis

Author(s): Turnbull Arran K | Kitchen Robert R | Larionov Alexey A | Renshaw Lorna | Dixon J | Sims Andrew H
Volume: 5
Issue: 1
Year: 2012
LINE-1 methylation status and its association with tetralogy of fallot in infants

Author(s): Sheng Wei | Wang Huijun | Ma Xiaojing | Qian Yanyan | Zhang Ping | Wu Yao | Zheng Fengyun | Chen Long | Huang Guoying | Ma Duan
Volume: 5
Issue: 1
Year: 2012
Network analysis identifies a putative role for the PPAR and type 1 interferon pathways in glucocorticoid actions in asthmatics

Author(s): Diez Diego | Goto Susumu | Fahy John V | Erle David J | Woodruff Prescott G | Wheelock Åsa M | Wheelock Craig E
Volume: 5
Issue: 1
Year: 2012
Human breast cancer associated fibroblasts exhibit subtype specific gene expression profiles

Author(s): Tchou Julia | Kossenkov Andrew V | Chang Lisa | Satija Celine | Herlyn Meenhard | Showe Louise C | Puré Ellen
Volume: 5
Issue: 1
Year: 2012
Hybridization and amplification rate correction for affymetrix SNP arrays

Author(s): Wang Quan | Peng Peichao | Qian Minping | Wan Lin | Deng Minghua
Volume: 5
Issue: 1
Year: 2012
Genetic and bioinformatic analyses of the expression and function of PI3K regulatory subunit PIK3R3 in an Asian patient gastric cancer library

Author(s): Zhou Jin | Chen Geng | Tang Yew | Sinha Rohit | Wu Yonghui | Yap Chui | Wang Guihua | Hu Junbo | Xia Xianmin | Tan Patrick | Goh Liang | Yen Paul
Volume: 5
Issue: 1
Year: 2012
The role of disease characteristics in the ethical debate on personal genome testing

Author(s): Bunnik Eline M | Schermer Maartje HN | JW Janssens A Cecile
Volume: 5
Issue: 1
Year: 2012
Patient-controlled encrypted genomic data: an approach to advance clinical genomics

Author(s): Trakadis Yannis J
Volume: 5
Issue: 1
Year: 2012
Adipose Co-expression networks across Finns and Mexicans identify novel triglyceride-associated genes

Author(s): Haas Blake E | Horvath Steve | Pietiläinen Kirsi H | Cantor Rita M | Nikkola Elina | Weissglas-Volkov Daphna | Rissanen Aila | Civelek Mete | Cruz-Bautista Ivette | Riba Laura | Kuusisto Johanna | Kaprio Jaakko | Tusie-Luna Teresa | Laakso Markku | Aguilar-Salinas Carlos A | Pajukanta Päivi
Volume: 5
Issue: 1
Year: 2012
Global analysis of DNA methylation in early-stage liver fibrosis

Author(s): Komatsu Yoko | Waku Tsuyoshi | Iwasaki Naoya | Ono Wakana | Yamaguchi Chie | Yanagisawa Junn
Volume: 5
Issue: 1
Year: 2012
Interaction among apoptosis-associated sequence variants and joint effects on aggressive prostate cancer

Author(s): Lavender Nicole A | Rogers Erica N | Yeyeodu Susan | Rudd James | Hu Ting | Zhang Jie | Brock Guy N | Kimbro Kevin S | Moore Jason H | Hein David W | Kidd La Creis R
Volume: 5
Issue: 1
Year: 2012
Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping

Author(s): Abraham Jean E | Maranian Mel J | Spiteri Inmaculada | Russell Roslin | Ingle Susan | Luccarini Craig | Earl Helena M | Pharoah Paul PD | Dunning Alison M | Caldas Carlos
Volume: 5
Issue: 1
Year: 2012
Identification of genes with a correlation between copy number and expression in gastric cancer

Author(s): Cheng Lei | Wang Ping | Yang Sheng | Yang Yanqing | Zhang Qing | Zhang Wen | Xiao Huasheng | Gao Hengjun | Zhang Qinghua
Volume: 5
Issue: 1
Year: 2012
Mitochondrial proteomics of nasopharyngeal carcinoma metastasis

Author(s): Liu Jianping | Zhan Xianquan | Li Maoyu | Li Guoqing | Zhang Pengfei | Xiao Zhefeng | Shao Meiying | Peng Fang | Hu Rong | Chen Zhuchu
Volume: 5
Issue: 1
Year: 2012
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